RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 IL4I1Q96RQ9 567 aa14.04□□□□□ -0.16
RAB5C-201ENST00000346213 BEX4Q9NWD9 120 aaPredicted RBP14.04□□□□□ -0.16
RAB5C-201ENST00000346213 CIB4A0PJX0 185 aa14.03□□□□□ -0.16
RAB5C-201ENST00000346213 TRIM64BA6NI03 449 aa14.03□□□□□ -0.16
RAB5C-201ENST00000346213 PLPP3O14495 311 aa14.03□□□□□ -0.16
RAB5C-201ENST00000346213 ABCD4O14678 606 aa14.03□□□□□ -0.16
RAB5C-201ENST00000346213 NDUFS7O75251 213 aa14.03□□□□□ -0.16
RAB5C-201ENST00000346213 ENTPD6O75354 484 aa14.03□□□□□ -0.16
RAB5C-201ENST00000346213 TRMUO75648 421 aaKnown RBP14.03□□□□□ -0.16
RAB5C-201ENST00000346213 LSAMPQ13449 338 aa14.03□□□□□ -0.16
RAB5C-201ENST00000346213 TBCEQ15813 527 aaPredicted RBP14.03□□□□□ -0.16
RAB5C-201ENST00000346213 UBE2UQ5VVX9 321 aa14.03□□□□□ -0.16
RAB5C-201ENST00000346213 ZNF620Q6ZNG0 422 aa14.03□□□□□ -0.16
RAB5C-201ENST00000346213 TMPRSS11FQ6ZWK6 438 aa14.03□□□□□ -0.16
RAB5C-201ENST00000346213 ERI1Q8IV48 349 aaKnown RBP14.03□□□□□ -0.16
RAB5C-201ENST00000346213 CDK20Q8IZL9 346 aa14.03□□□□□ -0.16
RAB5C-201ENST00000346213 ZNF611Q8N823 705 aa14.03□□□□□ -0.16
RAB5C-201ENST00000346213 ADPRHL1Q8NDY3 354 aa14.03□□□□□ -0.16
RAB5C-201ENST00000346213 OR1K1Q8NGR3 316 aa14.03□□□□□ -0.16
RAB5C-201ENST00000346213 BCL2L2Q92843 193 aaPredicted RBP14.03□□□□□ -0.16
RAB5C-201ENST00000346213 PRRG3Q9BZD7 231 aa14.03□□□□□ -0.16
RAB5C-201ENST00000346213 NOX3Q9HBY0 568 aa14.03□□□□□ -0.16
RAB5C-201ENST00000346213 TAS2R5Q9NYW4 299 aa14.03□□□□□ -0.16
RAB5C-201ENST00000346213 MED31Q9Y3C7 131 aa14.03□□□□□ -0.16
RAB5C-201ENST00000346213 CDH10Q9Y6N8 788 aa14.03□□□□□ -0.16
RAB5C-201ENST00000346213 A0A096LPE4 126 aa14.02□□□□□ -0.16
RAB5C-201ENST00000346213 A0A1W2PPZ6 126 aa14.02□□□□□ -0.16
RAB5C-201ENST00000346213 UNC119BA6NIH7 251 aa14.02□□□□□ -0.16
RAB5C-201ENST00000346213 E7EQL1 145 aa14.02□□□□□ -0.16
RAB5C-201ENST00000346213 CDC42EP2O14613 210 aa14.02□□□□□ -0.16
RAB5C-201ENST00000346213 PRKYO43930 277 aa14.02□□□□□ -0.16
RAB5C-201ENST00000346213 VAMP5O95183 116 aa14.02□□□□□ -0.16
RAB5C-201ENST00000346213 FADS2O95864 444 aaKnown RBP14.02□□□□□ -0.16
RAB5C-201ENST00000346213 CH25HO95992 272 aa14.02□□□□□ -0.16
RAB5C-201ENST00000346213 IFI30P13284 250 aa14.02□□□□□ -0.16
RAB5C-201ENST00000346213 POU3F1Q03052 451 aaPredicted RBP14.02□□□□□ -0.16
RAB5C-201ENST00000346213 ST3GAL4Q11206 333 aa14.02□□□□□ -0.16
RAB5C-201ENST00000346213 CARD17Q5XLA6 110 aa14.02□□□□□ -0.16
RAB5C-201ENST00000346213 STX19Q8N4C7 294 aa14.02□□□□□ -0.16
RAB5C-201ENST00000346213 OR6S1Q8NH40 331 aa14.02□□□□□ -0.16
RAB5C-201ENST00000346213 SLC38A2Q96QD8 506 aa14.02□□□□□ -0.16
RAB5C-201ENST00000346213 TSSK6Q9BXA6 273 aa14.02□□□□□ -0.16
RAB5C-201ENST00000346213 FANCFQ9NPI8 374 aa14.02□□□□□ -0.16
RAB5C-201ENST00000346213 TBC1D23Q9NUY8 699 aa14.02□□□□□ -0.16
RAB5C-201ENST00000346213 PARPBPQ9NWS1 579 aa14.02□□□□□ -0.16
RAB5C-201ENST00000346213 UPB1Q9UBR1 384 aa14.02□□□□□ -0.16
RAB5C-201ENST00000346213 RPL36Q9Y3U8 105 aaKnown RBP14.02□□□□□ -0.16
RAB5C-201ENST00000346213 LOC102725191A0A1B0GVB3 256 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 H3BMQ9 156 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 M0R1B8 84 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 OVOL3O00110 214 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 TLX2O43763 284 aaPredicted RBP14.01□□□□□ -0.17
RAB5C-201ENST00000346213 NOL3O60936 208 aaKnown RBP14.01□□□□□ -0.17
RAB5C-201ENST00000346213 SERPINI2O75830 405 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 CD3EP07766 207 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 CELA3BP08861 270 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 MAKP20794 623 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 CD40P25942 277 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 C21orf33P30042 268 aaPredicted RBP14.01□□□□□ -0.17
RAB5C-201ENST00000346213 PTH2RP49190 550 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 NKX6-1P78426 367 aaPredicted RBP14.01□□□□□ -0.17
RAB5C-201ENST00000346213 IRF3Q14653 427 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 SNAPC1Q16533 368 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 TBRG1Q3YBR2 411 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 Q5PR19 223 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 C20orf204Q6ZNR8 217 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 HTRA1Q92743 480 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 BOD1Q96IK1 185 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 COG8Q96MW5 612 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 CDCA4Q9BXL8 241 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 TEX12Q9BXU0 123 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 NAA50Q9GZZ1 169 aaKnown RBP14.01□□□□□ -0.17
RAB5C-201ENST00000346213 CHCHD3Q9NX63 227 aaKnown RBP14.01□□□□□ -0.17
RAB5C-201ENST00000346213 MRPL39Q9NYK5 338 aaKnown RBP14.01□□□□□ -0.17
RAB5C-201ENST00000346213 DNAJC27Q9NZQ0 273 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 LAMP3Q9UQV4 416 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 RCE1Q9Y256 329 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 B3GALT5Q9Y2C3 310 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 USF3Q68DE3 2245 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 C11orf98E9PRG8 122 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 OR2T1O43869 369 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 ASAH2BP0C7U1 165 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 ZNF43P17038 809 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 PCSK6P29122 969 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 CDKN1AP38936 164 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 RUNX1T1Q06455 604 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 MELKQ14680 651 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 RPL13AP3Q6NVV1 102 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 ANKRD13BQ86YJ7 626 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 POMGNT2Q8NAT1 580 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 C1orf162Q8NEQ5 155 aaPredicted RBP14.01□□□□□ -0.17
RAB5C-201ENST00000346213 OR4Q3Q8NH05 313 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 TMEM163Q8TC26 289 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 RAB2BQ8WUD1 216 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 BPIFA2Q96DR5 249 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 FUNDC2Q9BWH2 189 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 LINC00470Q9BZP3 86 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 ESRP2Q9H6T0 727 aaKnown RBP14.01□□□□□ -0.17
RAB5C-201ENST00000346213 GPR35Q9HC97 309 aa14.01□□□□□ -0.17
RAB5C-201ENST00000346213 ZNF701Q9NV72 531 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms