RNA–Protein interactions for RNA: ENST00000344622.8

GDNF-202, Transcript of glial cell derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene GDNF, Length 3,655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDNF-202ENST00000344622 PTGS2P35354 604 aa6.44□□□□□ -1.38
GDNF-202ENST00000344622 PSMD7P51665 324 aa6.44□□□□□ -1.38
GDNF-202ENST00000344622 KRR1Q13601 381 aaKnown RBP6.44□□□□□ -1.38
GDNF-202ENST00000344622 IRF3Q14653 427 aa6.44□□□□□ -1.38
GDNF-202ENST00000344622 SPHARQ15513 63 aa6.44□□□□□ -1.38
GDNF-202ENST00000344622 ZSWIM7Q19AV6 140 aa6.44□□□□□ -1.38
GDNF-202ENST00000344622 FCRLAQ7L513 359 aa6.44□□□□□ -1.38
GDNF-202ENST00000344622 MAMDC2Q7Z304 686 aaPredicted RBP6.44□□□□□ -1.38
GDNF-202ENST00000344622 CD163Q86VB7 1156 aa6.44□□□□□ -1.38
GDNF-202ENST00000344622 ATCAYQ86WG3 371 aa6.44□□□□□ -1.38
GDNF-202ENST00000344622 MYDGFQ969H8 173 aa6.44□□□□□ -1.38
GDNF-202ENST00000344622 MAP6Q96JE9 813 aa6.44□□□□□ -1.38
GDNF-202ENST00000344622 ENPP5Q9UJA9 477 aa6.44□□□□□ -1.38
GDNF-202ENST00000344622 HDGFL3Q9Y3E1 203 aa6.44□□□□□ -1.38
GDNF-202ENST00000344622 ANK3Q12955 4377 aaKnown RBP6.44□□□□□ -1.38
GDNF-202ENST00000344622 J3QLW9 94 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 IL18BPO95998 194 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 MT-ATP6P00846 226 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 CGAP01215 116 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 ZNF19P17023 458 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 SRSF1Q07955 248 aaKnown RBP eCLIP6.43□□□□□ -1.38
GDNF-202ENST00000344622 ACSF3Q4G176 576 aaPredicted RBP6.43□□□□□ -1.38
GDNF-202ENST00000344622 C22orf42Q6IC83 251 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 CFAP77Q6ZQR2 320 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 LINC00346Q8IVM7 164 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 LDAHQ9H6V9 325 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 VCX3AQ9NNX9 186 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 INIPQ9NRY2 104 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 PLCXD1Q9NUJ7 323 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 VSX1Q9NZR4 365 aaPredicted RBP6.43□□□□□ -1.38
GDNF-202ENST00000344622 KCNG2Q9UJ96 466 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 FBXL3Q9UKT7 428 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 B3GALT5Q9Y2C3 310 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 RPL36Q9Y3U8 105 aaKnown RBP6.43□□□□□ -1.38
GDNF-202ENST00000344622 RIIAD1A6NNX1 92 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 M0R3G1 203 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 AQP7O14520 342 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 AIREO43918 545 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 SLC16A7O60669 478 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 RCBTB2O95199 551 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 AGTR1P30556 359 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 SH3BGRP55822 239 aaPredicted RBP6.43□□□□□ -1.38
GDNF-202ENST00000344622 CHD3Q12873 2000 aaKnown RBP6.43□□□□□ -1.38
GDNF-202ENST00000344622 TBCEQ15813 527 aaPredicted RBP6.43□□□□□ -1.38
GDNF-202ENST00000344622 SLC25A30Q5SVS4 291 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 TMEM225Q6GV28 225 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 RPUSD3Q6P087 351 aaKnown RBP6.43□□□□□ -1.38
GDNF-202ENST00000344622 ZNF585AQ6P3V2 769 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 ERI1Q8IV48 349 aaKnown RBP6.43□□□□□ -1.38
GDNF-202ENST00000344622 RDH10Q8IZV5 341 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 FBXO17Q96EF6 278 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 C4orf36Q96KX1 117 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 TRIB1Q96RU8 372 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 PDCD1LG2Q9BQ51 273 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 PPP1R3EQ9H7J1 279 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 CALHM2Q9HA72 323 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 EMC7Q9NPA0 242 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 PNRC2Q9NPJ4 139 aaKnown RBP6.43□□□□□ -1.38
GDNF-202ENST00000344622 ACOXLQ9NUZ1 547 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 H2AFY2Q9P0M6 372 aaPredicted RBP6.43□□□□□ -1.38
GDNF-202ENST00000344622 ZNF319Q9P2F9 582 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 B9D1Q9UPM9 204 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 N6AMT1Q9Y5N5 214 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 A6NIN4 97 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 PNPP00491 289 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 JUNBP17275 347 aaPredicted RBP6.43□□□□□ -1.38
GDNF-202ENST00000344622 PAICSP22234 425 aaKnown RBP6.43□□□□□ -1.38
GDNF-202ENST00000344622 SLC6A6P31641 620 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 NANOS3P60323 173 aaKnown RBP6.43□□□□□ -1.38
GDNF-202ENST00000344622 PRPS1P60891 318 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 TUBA1BP68363 451 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 SLC3A1Q07837 685 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 OCLNQ16625 522 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 ZNF684Q5T5D7 378 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 UBE2UQ5VVX9 321 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 NXNL2Q5VZ03 156 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 ALKBH2Q6NS38 261 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 METAP1DQ6UB28 335 aaPredicted RBP6.43□□□□□ -1.38
GDNF-202ENST00000344622 TUBA1AQ71U36 451 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 DPY19L4Q7Z388 723 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 ZNF584Q8IVC4 421 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 NANOGP1Q8N7R0 232 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 SCAIQ8N9R8 606 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 INTS12Q96CB8 462 aaKnown RBP6.43□□□□□ -1.38
GDNF-202ENST00000344622 KCNS3Q9BQ31 491 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 YTHDF1Q9BYJ9 559 aaKnown RBP6.43□□□□□ -1.38
GDNF-202ENST00000344622 CRLF2Q9HC73 371 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 ERVK13-1Q9NX77 482 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 ABI3Q9P2A4 366 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 ERGIC3Q9Y282 383 aa6.43□□□□□ -1.38
GDNF-202ENST00000344622 RAB36O95755 333 aa6.42□□□□□ -1.38
GDNF-202ENST00000344622 BCL10O95999 233 aa6.42□□□□□ -1.38
GDNF-202ENST00000344622 HLA-DQA2P01906 255 aa6.42□□□□□ -1.38
GDNF-202ENST00000344622 ITGA5P08648 1049 aa6.42□□□□□ -1.38
GDNF-202ENST00000344622 ZNF3P17036 446 aa6.42□□□□□ -1.38
GDNF-202ENST00000344622 CLK1P49759 484 aaKnown RBP6.42□□□□□ -1.38
GDNF-202ENST00000344622 RASGEF1BQ0VAM2 473 aa6.42□□□□□ -1.38
GDNF-202ENST00000344622 ASPHD2Q6ICH7 369 aa6.42□□□□□ -1.38
GDNF-202ENST00000344622 MEPCEQ7L2J0 689 aaKnown RBP6.42□□□□□ -1.38
GDNF-202ENST00000344622 SLC7A5P1Q8MH63 180 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms