RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 LILRB3O75022 631 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 IGHA1P01876 353 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 OR4E1P0C645 316 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 CALCBP10092 127 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 ADH6P28332 368 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 CAV2P51636 162 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 CLVS2Q5SYC1 327 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 PAPD4Q6PIY7 484 aaKnown RBP11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 CMIPQ8IY22 773 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 TMEM52Q8NDY8 209 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 ZPLD1Q8TCW7 415 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 CA10Q9NS85 328 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 WDR87Q6ZQQ6 2873 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 TMED7-TICAM2A0A0A6YYA0 188 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 OR2T1O43869 369 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 MED6O75586 246 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 SDHAP31040 664 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 DOC2BQ14184 412 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 H3F3CQ6NXT2 135 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 GLDNQ6ZMI3 551 aaPredicted RBP11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 FAM57BQ71RH2 274 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 ZNF595Q8IYB9 648 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 OR51A4Q8NGJ6 313 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 DCBLD2Q96PD2 775 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 C20orf24Q9BUV8 137 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 TMED7Q9Y3B3 224 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 TRAV1-2A0A0B4J238 106 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 PRAMEF26H0Y7S4 382 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 TBX19O60806 448 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 OR8U9P0C7N5 309 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 CAMLGP49069 296 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 TMEM240Q5SV17 173 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 PRAMEF20Q5VT98 475 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 C1QL3Q5VWW1 255 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 DMKNQ6E0U4 476 aaPredicted RBP11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 LRRTM1Q86UE6 522 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 LRRC18Q8N456 261 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 IL17RCQ8NAC3 791 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 OR1J2Q8NGS2 313 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 PPP1R1CQ8WVI7 109 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 COX14Q96I36 57 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 FAM60AQ9NP50 221 aa11.3□□□□□ -0.6
SNRNP48-201ENST00000342415 FAM230AA0A1W2PPH8 454 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 H7C417 338 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 SULT1B1O43704 296 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 ZNF136P52737 540 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 BIDP55957 195 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 CCINQ13939 588 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 HNF4GQ14541 408 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 HLXQ14774 488 aaPredicted RBP11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 GRAMD2AQ8IUY3 354 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 ANGPTL6Q8NI99 470 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 BAHD1Q8TBE0 780 aaPredicted RBP11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 LPAR4Q99677 370 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 LYRM4Q9HD34 91 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 CUTCQ9NTM9 273 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 PLEKHJ1Q9NW61 149 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 MRPS17Q9Y2R5 130 aaKnown RBP11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 A0A0D9SG52 128 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 NUDT21O43809 227 aaKnown RBP11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 AKR1C3P42330 323 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 HERV-K104P61576 105 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 RPS27AP62979 156 aaKnown RBP11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 UBA52P62987 128 aaKnown RBP11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 MDGA2Q7Z553 956 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 SCMH1Q96GD3 660 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 PTGES2Q9H7Z7 377 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 LOC107986453A0A1B0GWG9 222 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 CELA2BP08218 269 aaPredicted RBP11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 MYF5P13349 255 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 CD1CP29017 333 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 GNRHRP30968 328 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 GFERP55789 205 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 RAB5BP61020 215 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 P4HA3Q7Z4N8 544 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 UEVLDQ8IX04 471 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 SVBPQ8N300 66 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 OR14A16Q8NHC5 309 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 SLAMF9Q96A28 289 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 LCORQ96JN0 433 aaPredicted RBP11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 ZNF681Q96N22 645 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 AIFM2Q9BRQ8 373 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 PELOQ9BRX2 385 aaKnown RBP11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 GHITMQ9H3K2 345 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 SLC2A4RGQ9NR83 387 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 OR52A1Q9UKL2 312 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 ETV7Q9Y603 341 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 DOCK4Q8N1I0 1966 aa11.29□□□□□ -0.6
SNRNP48-201ENST00000342415 AKR7A3O95154 331 aa11.28□□□□□ -0.6
SNRNP48-201ENST00000342415 PET100P0DJ07 73 aa11.28□□□□□ -0.6
SNRNP48-201ENST00000342415 EEF1A1P68104 462 aaKnown RBP11.28□□□□□ -0.6
SNRNP48-201ENST00000342415 ETFDHQ16134 617 aa11.28□□□□□ -0.6
SNRNP48-201ENST00000342415 TUSC1Q2TAM9 212 aa11.28□□□□□ -0.6
SNRNP48-201ENST00000342415 TMEM81Q6P7N7 255 aa11.28□□□□□ -0.6
SNRNP48-201ENST00000342415 C16orf47Q6ZP98 133 aaPredicted RBP11.28□□□□□ -0.6
SNRNP48-201ENST00000342415 RADILQ96JH8 1075 aa11.28□□□□□ -0.6
SNRNP48-201ENST00000342415 ZNF649Q9BS31 505 aa11.28□□□□□ -0.6
SNRNP48-201ENST00000342415 TRAF4Q9BUZ4 470 aaPredicted RBP11.28□□□□□ -0.6
SNRNP48-201ENST00000342415 PBX4Q9BYU1 374 aa11.28□□□□□ -0.6
SNRNP48-201ENST00000342415 ZNF442Q9H7R0 627 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms