RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 NOX4Q9NPH5 578 aa13.65□□□□□ -0.22
NECTIN1-202ENST00000340882 PNPOQ9NVS9 261 aa13.65□□□□□ -0.22
NECTIN1-202ENST00000340882 EIF3KQ9UBQ5 218 aaKnown RBP13.65□□□□□ -0.22
NECTIN1-202ENST00000340882 IGKV1D-43A0A0B4J1Z2 117 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 KIR2DS1A0A191URI9 304 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 TMEM178BH3BS89 294 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 SDHDO14521 159 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 RNF13O43567 381 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 TYROBPO43914 113 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 TIMM8AO60220 97 aaPredicted RBP13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 OR6A2O95222 327 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 ANP32DO95626 131 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 FGF12P61328 243 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 PSG4Q00888 419 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 PDCD1Q15116 288 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 FAM189A2Q15884 450 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 NRN1LQ496H8 165 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 CEP85LQ5SZL2 805 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 SAMD5Q5TGI4 173 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 DHRS4L2Q6PKH6 230 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 LINC00114Q6XXX2 140 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 KLBQ86Z14 1044 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 TMEM86BQ8N661 226 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 OR2Z1Q8NG97 314 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 SLC30A2Q9BRI3 323 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 MRPL13Q9BYD1 178 aaKnown RBP13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 TMEM27Q9HBJ8 222 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 TMEM165Q9HC07 324 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 CGGBP1Q9UFW8 167 aaPredicted RBP13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 PPP1R3CQ9UQK1 317 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 UGT2A1Q9Y4X1 527 aa13.64□□□□□ -0.23
NECTIN1-202ENST00000340882 TMEM247A6NEH6 219 aa13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 GPR137BO60478 399 aa13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 ERLIN1O75477 346 aa13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 SLC2A10O95528 541 aa13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 CH25HO95992 272 aa13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 MT-ATP6P00846 226 aa13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 SERPINE1P05121 402 aa13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 VSIG8P0DPA2 414 aa13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 BMP2P12643 396 aa13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 ETS2P15036 469 aa13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 RPS2P15880 293 aaKnown RBP13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 GDI2P50395 445 aaKnown RBP13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 MMP16P51512 607 aa13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 CLRN1P58418 232 aa13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 GNB2P62879 340 aa13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 ERVK-25P63136 954 aa13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 ZNF74Q16587 644 aa13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 FITM2Q8N6M3 262 aa13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 NFKBIDQ8NI38 313 aa13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 ZNF420Q8TAQ5 688 aaPredicted RBP13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 NUDT16L1Q9BRJ7 211 aaKnown RBP13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 CDADC1Q9BWV3 514 aa13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 WNT5BQ9H1J7 359 aa13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 WDR55Q9H6Y2 383 aaPredicted RBP13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 SELENONQ9NZV5 590 aa13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.63□□□□□ -0.23
NECTIN1-202ENST00000340882 NOTCH3Q9UM47 2321 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 IGHV4-59P01825 116 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 IGHG1P01857 330 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 THY1P04216 161 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 SFTPBP07988 381 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 SLC1A6P48664 564 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 ERFP50548 548 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 ZNF84P51523 738 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 RGS8P57771 180 aaPredicted RBP13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 RUNDC3AQ59EK9 446 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 Q6ZSV7 163 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 C1orf174Q8IYL3 243 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 NOXO1Q8NFA2 376 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 DYRK2Q92630 601 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 THOC1Q96FV9 657 aaKnown RBP13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 OR2V2Q96R30 315 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 ZBTB18Q99592 522 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 SEPHS2Q99611 448 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 TMEM246Q9BRR3 403 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 SLC19A3Q9BZV2 496 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 SIAEQ9HAT2 523 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 GCM1Q9NP62 436 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 CCNB1IP1Q9NPC3 277 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 THUMPD1Q9NXG2 353 aaKnown RBP13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 HAO1Q9UJM8 370 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 POMT1Q9Y6A1 747 aa13.62□□□□□ -0.23
NECTIN1-202ENST00000340882 TNFRSF13BO14836 293 aaPredicted RBP13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 ICMTO60725 284 aa13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 TRMUO75648 421 aaKnown RBP13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 LYPD3O95274 346 aa13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 CYB5R3P00387 301 aaPredicted RBP13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 IL6P05231 212 aa13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 CSF1P09603 554 aa13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 HOXB9P17482 250 aaPredicted RBP13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 TNFRSF1AP19438 455 aa13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 ZNF133P52736 654 aaPredicted RBP13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 PCBP3P57721 371 aaKnown RBP13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 NCALDP61601 193 aa13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 MRPS34P82930 218 aaKnown RBP13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 FMODQ06828 376 aa13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 C2orf68Q2NKX9 166 aa13.61□□□□□ -0.23
NECTIN1-202ENST00000340882 ZMAT1Q5H9K5 638 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms