RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 SLC22A31A6NKX4 558 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 TNFSF13O75888 250 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 PDGFBP01127 241 aaPredicted RBP7.84□□□□□ -1.15
TDP1-201ENST00000335725 OR5H8P0DN80 308 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 PRDX3P30048 256 aaKnown RBP7.84□□□□□ -1.15
TDP1-201ENST00000335725 SULT1A2P50226 295 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 UBE2MP61081 183 aaKnown RBP7.84□□□□□ -1.15
TDP1-201ENST00000335725 CRMP1Q14194 572 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 TRNP1Q6NT89 227 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 MPZL3Q6UWV2 235 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 LINC00116Q8NCU8 138 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 SLC17A9Q9BYT1 436 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 MAGT1Q9H0U3 335 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 DPEP2Q9H4A9 486 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 ST3GAL6Q9Y274 331 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 SPACA6W5XKT8 324 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 SHANK3Q9BYB0 1731 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 TGIF2-C20orf24A0A0A6YYL0 155 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 A0A1B0GTL3 188 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 CLEC3BP05452 202 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 CKMP06732 381 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 C8AP07357 584 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 FOLR1P15328 257 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 SLC6A9P48067 706 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 TGM3Q08188 693 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 NOGQ13253 232 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 SOHLH1Q5JUK2 328 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 LY6G6FQ5SQ64 297 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 PRAMEF17Q5VTA0 474 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 MRNIPQ6NTE8 343 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 DNM1P34Q6PK57 102 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 LCTLQ6UWM7 567 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 CHST13Q8NET6 341 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 OR4D5Q8NGN0 318 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 C11orf40Q8WZ69 217 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 MOB3AQ96BX8 217 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 PANX1Q96RD7 426 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 GPR21Q99679 349 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 CCDC3Q9BQI4 270 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 POLR2J3Q9H1A7 115 aaKnown RBP7.84□□□□□ -1.15
TDP1-201ENST00000335725 POLR3KQ9Y2Y1 108 aaPredicted RBP7.84□□□□□ -1.15
TDP1-201ENST00000335725 NHSQ6T4R5 1651 aa7.84□□□□□ -1.15
TDP1-201ENST00000335725 A0A0B4J2A0 478 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 A0A1B0GTI1 187 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 AQP7P3A6NL99 342 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 ZNF705FA8MVS1 300 aaPredicted RBP7.83□□□□□ -1.16
TDP1-201ENST00000335725 H3BRB1 525 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 H7BY64 318 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 ERAL1O75616 437 aaKnown RBP7.83□□□□□ -1.16
TDP1-201ENST00000335725 ZNF705DP0CH99 300 aaPredicted RBP7.83□□□□□ -1.16
TDP1-201ENST00000335725 ZNF705BP0CI00 300 aaPredicted RBP7.83□□□□□ -1.16
TDP1-201ENST00000335725 HOXB2P14652 356 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 PGAM2P15259 253 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 ATF1P18846 271 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 EMP2P54851 167 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 HIST1H3AP68431 136 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 TMEM183BQ1AE95 376 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 ZNF699Q32M78 642 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 HNRNPA1L2Q32P51 320 aaKnown RBP7.83□□□□□ -1.16
TDP1-201ENST00000335725 ZNF585AQ6P3V2 769 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 PODNL1Q6PEZ8 512 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 TMEM207Q6UWW9 146 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 ABHD15Q6UXT9 468 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 GLT6D1Q7Z4J2 308 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 CMTM1Q8IZ96 169 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 AMER3Q8N944 861 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 ZNF485Q8NCK3 441 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 OR52M1Q8NGK5 317 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 OR4S2Q8NH73 311 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 ACY3Q96HD9 319 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 CIB3Q96Q77 187 aaPredicted RBP7.83□□□□□ -1.16
TDP1-201ENST00000335725 SPXQ9BT56 116 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 MS4A8Q9BY19 250 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 SEMA4GQ9NTN9 838 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 GALPQ9UBC7 116 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 SHPKQ9UHJ6 478 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 COX11Q9Y6N1 276 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 QSER1Q2KHR3 1735 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 PDYNP01213 254 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 TUBG1P23258 451 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 FCARP24071 287 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 CD34P28906 385 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 SOX18P35713 384 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 KIR3DL1P43629 444 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 LPAR6P43657 344 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 SURF1Q15526 300 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 AMHR2Q16671 573 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 TMPPEQ6ZT21 453 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 SCD5Q86SK9 330 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 HASPINQ8TF76 798 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 TMEM176AQ96HP8 235 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 Q9N2J8 555 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 TUBG2Q9NRH3 451 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 OR5AC2Q9NZP5 309 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 ZNF337Q9Y3M9 751 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 INSL6Q9Y581 213 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 WDR81Q562E7 1941 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 BRCA1P38398 1863 aaKnown RBP7.83□□□□□ -1.16
TDP1-201ENST00000335725 MAGEB17A8MXT2 336 aa7.83□□□□□ -1.16
TDP1-201ENST00000335725 RAMP3O60896 148 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms