RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 RBMS2Q15434 407 aaKnown RBP12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 TMEM205Q6UW68 189 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 SLC29A4Q7RTT9 530 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 BPHLQ86WA6 291 aaPredicted RBP12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 LIPHQ8WWY8 451 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 TTC9Q92623 222 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 CCNL2Q96S94 520 aaPredicted RBP12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 MESP1Q9BRJ9 268 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 ARL6Q9H0F7 186 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 EMC3Q9P0I2 261 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 FARSAQ9Y285 508 aaKnown RBP12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 EMC9Q9Y3B6 208 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 NPTNQ9Y639 398 aa12.66□□□□□ -0.38
ATP2C1-201ENST00000328560 TRBV5-7A0A0A0MS05 114 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 IGLV3-19P01714 112 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 LIPCP11150 499 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 RAP2BP61225 183 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 ANKRD16Q6P6B7 361 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 BIVMQ86UB2 503 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 SLC38A6Q8IZM9 456 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 C15orf40Q8WUR7 153 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 SLC25A44Q96H78 314 aaPredicted RBP12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 MRPL22Q9NWU5 206 aaKnown RBP12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 CKLFQ9UBR5 152 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 FBXL3Q9UKT7 428 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 AHSA1O95433 338 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 CD2P06729 351 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 FBLP22087 321 aaKnown RBP12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 ABCD3P28288 659 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 DNASE1L1P49184 302 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 RIDAP52758 137 aaKnown RBP12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 FMODQ06828 376 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 C1orf140Q5VVS0 124 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 CORO6Q6QEF8 472 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 FAM198BQ6UWH4 519 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 ZNF679Q8IYX0 411 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 OR51A2Q8NGJ7 313 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 ABHD6Q9BV23 337 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 PHF7Q9BWX1 381 aaPredicted RBP12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 B3GNT4Q9C0J1 378 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 MED12Q93074 2177 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 SHISA7A6NL88 538 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 OPN1LWP04000 364 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 IGKV3-11P04433 115 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 GIPP09681 153 aaPredicted RBP12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 DMWDQ09019 674 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 ELAVL1Q15717 326 aaKnown RBP12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 SCGB2B2Q4G0G5 96 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 C14orf28Q4W4Y0 310 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 CLLU1Q5K131 121 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 PLXDC1Q8IUK5 500 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 MUC20Q8N307 709 aaPredicted RBP12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 OR1L3Q8NH93 324 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 DAZLQ92904 295 aaKnown RBP12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 VDAC3Q9Y277 283 aa12.65□□□□□ -0.38
ATP2C1-201ENST00000328560 KIF26BQ2KJY2 2108 aa12.65□□□□□ -0.39
ATP2C1-201ENST00000328560 LDOC1O95751 146 aaPredicted RBP12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 HOXD11P31277 338 aaPredicted RBP12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 AANATQ16613 207 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 KCTD18Q6PI47 426 aaPredicted RBP12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 OR1J4Q8NGS1 313 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 MCHR2Q969V1 340 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 NPAS1Q99742 590 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 WWTR1Q9GZV5 400 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 ZNF304Q9HCX3 659 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 THADAQ6YHU6 1953 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 CCDC85CA6NKD9 419 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 CSF1P09603 554 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 AKAIN1P0CW23 69 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 FOLR1P15328 257 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 C4BPBP20851 252 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 ARRB1P49407 418 aaPredicted RBP12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 DLX5P56178 289 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 H2BFSP57053 126 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 SMUG1Q53HV7 270 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 DCAF12L2Q5VW00 463 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 B3GNTL1Q67FW5 361 aaPredicted RBP12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 ZNF248Q8NDW4 579 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 RADILQ96JH8 1075 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 MMACHCQ9Y4U1 282 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 RNF215Q9Y6U7 377 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 LOC100289279A0A1B0GTE1 492 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 TMEM272A0A1B0GTI8 110 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 LMO7DNF2Z398 122 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 PHYHO14832 338 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 DUX1O43812 170 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 ZNF823P16415 610 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 HSD11B2P80365 405 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 SGCBQ16585 318 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 TMEM225Q6GV28 225 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 STEAP1BQ6NZ63 245 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 ADGRG3Q86Y34 549 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 OR13C3Q8NGS6 347 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 ZNF285Q96NJ3 590 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 ZNF275Q9NSD4 429 aaPredicted RBP12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 CTSFQ9UBX1 484 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 LRP12Q9Y561 859 aa12.64□□□□□ -0.39
ATP2C1-201ENST00000328560 PLSCR5A0PG75 271 aa12.63□□□□□ -0.39
ATP2C1-201ENST00000328560 FITM1A5D6W6 292 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms