RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 EIF2S3P41091 472 aaKnown RBP11.55□□□□□ -0.56
CCDC60-201ENST00000327554 MAP3K8P41279 467 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 CCR2P41597 374 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 SLC6A9P48067 706 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 SSTP61278 116 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 IL13RA1P78552 427 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 CDNFQ49AH0 187 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 ZNF614Q8N883 585 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 CDRT4Q8N9R6 151 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 OR4S1Q8NGB4 309 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 ADAMTS17Q8TE56 1095 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 STACQ99469 402 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 GAL3ST1Q99999 423 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 MICU1Q9BPX6 476 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 TMEM74BQ9NUR3 256 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 ZNF107Q9UII5 783 aaPredicted RBP11.55□□□□□ -0.56
CCDC60-201ENST00000327554 IKZF2Q9UKS7 526 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 HEATR5AQ86XA9 2040 aa11.55□□□□□ -0.56
CCDC60-201ENST00000327554 MSGN1A6NI15 193 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 DBX1A6NMT0 343 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 MFNGO00587 321 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 PPIHO43447 177 aaKnown RBP11.54□□□□□ -0.56
CCDC60-201ENST00000327554 PRNPP04156 253 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 PRKAR2AP13861 404 aaKnown RBP11.54□□□□□ -0.56
CCDC60-201ENST00000327554 ADRB3P13945 408 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 PMELP40967 661 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 CSNK1EP49674 416 aaKnown RBP11.54□□□□□ -0.56
CCDC60-201ENST00000327554 SKP1P63208 163 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 TGIF1Q15583 401 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 AKIRIN2Q53H80 203 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 OR52W1Q6IF63 320 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 ZNF425Q6IV72 752 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 PAPD4Q6PIY7 484 aaKnown RBP11.54□□□□□ -0.56
CCDC60-201ENST00000327554 DHRS11Q6UWP2 260 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 ADAMTSL4Q6UY14 1074 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 KCTD9Q7L273 389 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 VN1R4Q7Z5H5 301 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 SAMD14Q8IZD0 417 aaPredicted RBP11.54□□□□□ -0.56
CCDC60-201ENST00000327554 CASTOR1Q8WTX7 329 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 GAL3ST3Q96A11 431 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 ZMAT3Q9HA38 289 aaKnown RBP11.54□□□□□ -0.56
CCDC60-201ENST00000327554 MKKSQ9NPJ1 570 aaPredicted RBP11.54□□□□□ -0.56
CCDC60-201ENST00000327554 TIMM10BQ9Y5J6 103 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 DMRT1Q9Y5R6 373 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 LOC100509620A0A075B734 347 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 A6NLC8 198 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 ELOA3DA6NLF2 546 aaPredicted RBP11.54□□□□□ -0.56
CCDC60-201ENST00000327554 DCTN6O00399 190 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 PHYHO14832 338 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 FCGR3AP08637 254 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 NQO2P16083 231 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 ZNF14P17017 642 aaPredicted RBP11.54□□□□□ -0.56
CCDC60-201ENST00000327554 TACR3P29371 465 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 LPAR6P43657 344 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 SLC25A1P53007 311 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 RPS4XP62701 263 aaKnown RBP11.54□□□□□ -0.56
CCDC60-201ENST00000327554 HTRA3P83110 453 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 ELOA3BQ3SY89 546 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 MOGAT2Q3SYC2 334 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 CD163Q86VB7 1156 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 WDSUB1Q8N9V3 476 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 PLPP7Q8NBV4 271 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 ELOA3Q8NG57 546 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 C4orf45Q96LM5 186 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 RSRP1Q9BUV0 290 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 SLC17A9Q9BYT1 436 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 FANCMQ8IYD8 2048 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 TRPM6Q9BX84 2022 aa11.54□□□□□ -0.56
CCDC60-201ENST00000327554 TVP23AA6NH52 213 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 NPIPB9F8W1W9 429 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 PRAMEF26H0Y7S4 382 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 LATO43561 262 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 KLK3P07288 261 aaPredicted RBP11.53□□□□□ -0.56
CCDC60-201ENST00000327554 ACKR3P25106 362 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 GABRA3P34903 492 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 SERPINF1P36955 418 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 GPX4P36969 197 aaPredicted RBP11.53□□□□□ -0.56
CCDC60-201ENST00000327554 RPS27P42677 84 aaKnown RBP11.53□□□□□ -0.56
CCDC60-201ENST00000327554 CDK3Q00526 305 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 EXOSC7Q15024 291 aaKnown RBP11.53□□□□□ -0.56
CCDC60-201ENST00000327554 WDR38Q5JTN6 314 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 C9orf152Q5JTZ5 239 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 ULK3Q6PHR2 472 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 SHISA5Q8N114 240 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 ZDHHC22Q8N966 263 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 ADAD2Q8NCV1 583 aaKnown RBP11.53□□□□□ -0.56
CCDC60-201ENST00000327554 TSEN15Q8WW01 171 aaKnown RBP11.53□□□□□ -0.56
CCDC60-201ENST00000327554 TCTEX1D2Q8WW35 142 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 TAAR9Q96RI9 348 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 GPX7Q96SL4 187 aaPredicted RBP11.53□□□□□ -0.56
CCDC60-201ENST00000327554 PRRT1Q99946 306 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 C5orf51A6NDU8 294 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 EIF1AYO14602 144 aaKnown RBP11.53□□□□□ -0.56
CCDC60-201ENST00000327554 FBXO24O75426 580 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 PCCBP05166 539 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 RD3LP0DJH9 198 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 MPZP25189 248 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 CCKBRP32239 447 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 CD80P33681 288 aa11.53□□□□□ -0.56
CCDC60-201ENST00000327554 EIF1AXP47813 144 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms