RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 ACHEP22303 614 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 HTR2CP28335 458 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 LBX1P52954 281 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 HSD17B7P56937 341 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 ZNF584Q8IVC4 421 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 PRSS35Q8N3Z0 413 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 ZNF454Q8N9F8 522 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 STEAP2Q8NFT2 490 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 CCDC107Q8WV48 283 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 TCTN2Q96GX1 697 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 LRFN5Q96NI6 719 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 CUTCQ9NTM9 273 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 MTFP1Q9UDX5 166 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 NPIPA1Q9UND3 350 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 LTBP2Q14767 1821 aa11.65□□□□□ -0.54
HMGCS1-201ENST00000325110 C5orf51A6NDU8 294 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 ZNF736B4DX44 427 aaPredicted RBP11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 P2RY10O00398 339 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 HLA-AP01891 365 aaKnown RBP11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 IGFBP4P22692 258 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 CXADRP78310 365 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 SKP2Q13309 424 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 OR7A5Q15622 319 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 GPAT4Q86UL3 456 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 ARMC10Q8N2F6 343 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 SLC43A2Q8N370 569 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 C12orf45Q8N5I9 185 aaPredicted RBP11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 SPERTQ8NA61 448 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 TTC9Q92623 222 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 CMBLQ96DG6 245 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 NMNAT2Q9BZQ4 307 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 RTN4RQ9BZR6 473 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 UPB1Q9UBR1 384 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 ZNF432O94892 652 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 PNPP00491 289 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 IGF2P01344 180 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 DCNP07585 359 aaKnown RBP11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 POU2F2P09086 479 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 KIR3DL2P43630 455 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 MFGE8Q08431 387 aaPredicted RBP11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 IL10RAQ13651 578 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 LINC00114Q6XXX2 140 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 RHOUQ7L0Q8 258 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 NUP54Q7Z3B4 507 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 GABRG1Q8N1C3 465 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 TSTD1Q8NFU3 115 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 OTOSQ8NHW6 89 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 ZNF524Q96C55 264 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 IFT46Q9NQC8 304 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 TAS2R3Q9NYW6 316 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 PIPOXQ9P0Z9 390 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 TMED7-TICAM2A0A0A6YYA0 188 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 LOC100289279A0A1B0GTE1 492 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 TMEM269A0A1B0GVZ9 245 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 ZNF749O43361 778 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 IGHV4-34P06331 123 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 LPLP06858 475 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 ACTBP60709 375 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 ACTG1P63261 375 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 POU3F1Q03052 451 aaPredicted RBP11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 SLC17A1Q14916 467 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 ELFN2Q5R3F8 820 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 CARD17Q5XLA6 110 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 CDC20BQ86Y33 519 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 OR6M1Q8NGM8 313 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 OR1J4Q8NGS1 313 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 RADILQ96JH8 1075 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 MRI1Q9BV20 369 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 SLC19A3Q9BZV2 496 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 MED29Q9NX70 200 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 OPN4Q9UHM6 478 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 ZNF230Q9UIE0 474 aaPredicted RBP11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 TMED7Q9Y3B3 224 aa11.64□□□□□ -0.55
HMGCS1-201ENST00000325110 TEX51A0A1B0GUA7 166 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 KANTRA0A1W2PQU2 76 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 FAM221BA6H8Z2 402 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 SHISA8B8ZZ34 492 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 NPIPB9F8W1W9 429 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 H2BFMP0C1H6 154 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 SLC2A1P11166 492 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 CD34P28906 385 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 AKR1C2P52895 323 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 AKR1C1Q04828 323 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 TUSC1Q2TAM9 212 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 PRTGQ2VWP7 1150 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 RNASE10Q5GAN6 216 aaKnown RBP11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 KIAA0895LQ68EN5 471 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 FAM122BQ7Z309 247 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 HDDC2Q7Z4H3 204 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 LRRTM1Q86UE6 522 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 EID2Q8N6I1 236 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 ABHD6Q9BV23 337 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 NUDT9Q9BW91 350 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 ELL3Q9HB65 397 aaPredicted RBP11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 APMAPQ9HDC9 416 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 EPHA6Q9UF33 1036 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 LAMA1P25391 3075 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 ALOX12BO75342 701 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 PPP3CBP16298 524 aa11.63□□□□□ -0.55
HMGCS1-201ENST00000325110 MST1P26927 711 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms