RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 RAB6CQ53S08 254 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 HSD11B1LQ7Z5J1 315 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 RAB6CQ9H0N0 254 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 TAS2R5Q9NYW4 299 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 PIAS3Q9Y6X2 628 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 COL2A1P02458 1487 aaPredicted RBP15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 TOGARAM1Q9Y4F4 1720 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 CRYM-AS1A6NIL9 109 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 CIDEAO60543 219 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 NKX2-1P43699 371 aaPredicted RBP15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 OR5B3Q8NH48 314 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 VAMP8Q9BV40 100 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 NKX2-4Q9H2Z4 354 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 ZMAT3Q9HA38 289 aaKnown RBP15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 GDE1Q9NZC3 331 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 SCN4AP35499 1836 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 H3BQ06 376 aaPredicted RBP15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 CISD2Q8N5K1 135 aaKnown RBP15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 GAREM1Q9H706 876 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 B3GALT5Q9Y2C3 310 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 SERINC4A6NH21 518 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 RTL8BQ17RB0 113 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 UQCC3Q6UW78 93 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 CHRDL1Q9BU40 450 aa15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 LIN7CQ9NUP9 197 aaKnown RBP15.55■□□□□ 0.08
SMCHD1-201ENST00000320876 ZNF732B4DXR9 585 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 CSF3P09919 207 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 ZNF26P17031 533 aaPredicted RBP15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 RAB38P57729 211 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 SLC17A1Q14916 467 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 NXT1Q9UKK6 140 aaKnown RBP15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 ZNF816-ZNF321PA0A0X1KG74 233 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 DEGS1O15121 323 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 CNIH1O95406 144 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 MT-ATP6P00846 226 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 GLB1P16278 677 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 WNT7BP56706 349 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 C17orf67Q0P5P2 114 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 ZNF321PQ8N8H1 164 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 ZFP62Q8NB50 900 aaPredicted RBP15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 CLRN3Q8NCR9 226 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 GJC3Q8NFK1 279 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 EMG1Q92979 244 aaKnown RBP15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 NDFIP1Q9BT67 221 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 LYRM2Q9NU23 88 aaPredicted RBP15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 GABRQQ9UN88 632 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 GLCEO94923 617 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 CHRM2P08172 466 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 MGMTP16455 207 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 CRMP1Q14194 572 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 ACOT6Q3I5F7 207 aaPredicted RBP15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 BPIFB3P59826 476 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 CDC20Q12834 499 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 GDF7Q7Z4P5 450 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 TP53INP2Q8IXH6 220 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 E5RGE8 158 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 CSNK1DP48730 415 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 P2RX3P56373 397 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 TPPP2P59282 170 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 NMES1Q9C002 83 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 ACTR3CQ9C0K3 210 aaPredicted RBP15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 KCNG2Q9UJ96 466 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 SH3BGRL2Q9UJC5 107 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 NSG2Q9Y328 171 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 ARSGQ96EG1 525 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 ZNF845Q96IR2 970 aaPredicted RBP15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 DNMT3BQ9UBC3 853 aaKnown RBP15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 ANKRD36A6QL64 1941 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 HOXC13P31276 330 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 SSBP1Q04837 148 aaKnown RBP15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 HNRNPA1L2Q32P51 320 aaKnown RBP15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 CLEC9AQ6UXN8 241 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 GRINAQ7Z429 371 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 CACFD1Q9UGQ2 172 aa15.54■□□□□ 0.08
SMCHD1-201ENST00000320876 P2RY10O00398 339 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 SSR4P51571 173 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 GLIPR1L1Q6UWM5 242 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 TMEM255BQ8WV15 326 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 NOSIPQ9Y314 301 aaKnown RBP15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 ZNF727A8MUV8 499 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 IQCF3P0C7M6 154 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 PTGER1P34995 402 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 RPS19P39019 145 aaKnown RBP15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 SLC35E1Q96K37 410 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 PSMB6P28072 239 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 MAP2K6P52564 334 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 TBC1D28Q2M2D7 210 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 RPL7L1Q6DKI1 246 aaKnown RBP15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 USP51Q70EK9 711 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 OR13D1Q8NGV5 346 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 BOLA1Q9Y3E2 137 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 LIPAP38571 399 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 RBPJQ06330 500 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 OXA1LQ15070 435 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 GPR171O14626 319 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 ENPP1P22413 925 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 MRPL19P49406 292 aaKnown RBP15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 THNSL2Q86YJ6 484 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 NANOGP1Q8N7R0 232 aa15.53■□□□□ 0.08
SMCHD1-201ENST00000320876 ZBTB44Q8NCP5 570 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms