RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 ZC3HAV1LQ96H79 300 aaKnown RBP6.78□□□□□ -1.32
IFT88-201ENST00000319980 JSRP1Q96MG2 331 aaPredicted RBP6.78□□□□□ -1.32
IFT88-201ENST00000319980 GNRHR2Q96P88 292 aa6.78□□□□□ -1.32
IFT88-201ENST00000319980 ZNF700Q9H0M5 742 aa6.78□□□□□ -1.32
IFT88-201ENST00000319980 B3GAT1Q9P2W7 334 aa6.78□□□□□ -1.32
IFT88-201ENST00000319980 NUFIP1Q9UHK0 495 aaKnown RBP6.78□□□□□ -1.32
IFT88-201ENST00000319980 PCDHGA9Q9Y5G4 932 aaKnown RBP6.78□□□□□ -1.32
IFT88-201ENST00000319980 SDK2Q58EX2 2172 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 ANXA2P2A6NMY6 339 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 FAM47E-STBD1D6RA91 191 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 GPR171O14626 319 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 STK17BO94768 372 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 ANXA2P07355 339 aaKnown RBP6.77□□□□□ -1.33
IFT88-201ENST00000319980 GP1BAP07359 652 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 CCL3P10147 92 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 ACP1P24666 158 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 FOLR3P41439 243 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 MMP15P51511 669 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 RIDAP52758 137 aaKnown RBP6.77□□□□□ -1.33
IFT88-201ENST00000319980 PRSS12P56730 875 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 CLDN6P56747 220 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 PITPNAQ00169 270 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 ROM1Q03395 351 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 TBRG1Q3YBR2 411 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 TEX30Q5JUR7 227 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 UBE2NLQ5JXB2 153 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 DCAF12Q5T6F0 453 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 STPG1Q5TH74 334 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 LRFN4Q6PJG9 635 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 CORO6Q6QEF8 472 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 DCXRQ7Z4W1 244 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 ZBTB44Q8NCP5 570 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 OR52N5Q8NH56 324 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 RNF128Q8TEB7 428 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 ADAMTS14Q8WXS8 1223 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 AKAP7Q9P0M2 348 aaPredicted RBP6.77□□□□□ -1.33
IFT88-201ENST00000319980 ZNF221Q9UK13 617 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 FBXL3Q9UKT7 428 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 LRP12Q9Y561 859 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 CELSR3Q9NYQ7 3312 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 TNRC6BQ9UPQ9 1833 aaKnown RBP6.77□□□□□ -1.33
IFT88-201ENST00000319980 LNP1A1A4G5 178 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 PMS2P1A4D2B8 440 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 HSPB2A8KAH6 182 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 H0YC42 278 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 DOK2O60496 412 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 ZNF432O94892 652 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 SCGB1D2O95969 90 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 RAF1P04049 648 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 DPP4P27487 766 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 NR4A2P43354 598 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 AGFG1P52594 562 aaKnown RBP6.77□□□□□ -1.33
IFT88-201ENST00000319980 MFGE8Q08431 387 aaPredicted RBP6.77□□□□□ -1.33
IFT88-201ENST00000319980 CAMK2DQ13557 499 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 HSPB2Q16082 182 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 ATAD3CQ5T2N8 411 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 RPS19BP1Q86WX3 136 aaKnown RBP6.77□□□□□ -1.33
IFT88-201ENST00000319980 PLCZ1Q86YW0 608 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 TOMM5Q8N4H5 51 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 GCDHQ92947 438 aaPredicted RBP6.77□□□□□ -1.33
IFT88-201ENST00000319980 YIPF5Q969M3 257 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 DMRTB1Q96MA1 342 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 RBP7Q96R05 134 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 BEX2Q9BXY8 128 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 CENPMQ9NSP4 180 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 DDX28Q9NUL7 540 aaKnown RBP6.77□□□□□ -1.33
IFT88-201ENST00000319980 PADI1Q9ULC6 663 aa6.77□□□□□ -1.33
IFT88-201ENST00000319980 PAIP2BQ9ULR5 123 aaKnown RBP6.77□□□□□ -1.33
IFT88-201ENST00000319980 CNTRLQ7Z7A1 2325 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 ZNF814B7Z6K7 855 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 EIF1AYO14602 144 aaKnown RBP6.76□□□□□ -1.33
IFT88-201ENST00000319980 RAMP1O60894 148 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 KHDRBS3O75525 346 aaKnown RBP6.76□□□□□ -1.33
IFT88-201ENST00000319980 SP9P0CG40 484 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 TCN2P20062 427 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 SLC6A1P30531 599 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 DDOSTP39656 456 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 SSR4P51571 173 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 CCR9P51686 369 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 SNTA1Q13424 505 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 SLC36A2Q495M3 483 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 NDUFAF7Q7L592 441 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 LINGO2Q7L985 606 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 LRRTM1Q86UE6 522 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 UEVLDQ8IX04 471 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 ZNF454Q8N9F8 522 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 FADS6Q8N9I5 356 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 SYNPRQ8TBG9 265 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 M1APQ8TC57 530 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 MCHR2Q969V1 340 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 SLC25A38Q96DW6 304 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 ST6GAL2Q96JF0 529 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 MARVELD1Q9BSK0 173 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 OR5V1Q9UGF6 321 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 CAMK2AQ9UQM7 478 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 EMC9Q9Y3B6 208 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 LOXL2Q9Y4K0 774 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 CACNG2Q9Y698 323 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 HMX3A6NHT5 357 aa6.76□□□□□ -1.33
IFT88-201ENST00000319980 NPIPB13A6NJU9 1138 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms