RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 NUDT9Q9BW91 350 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 CHST6Q9GZX3 395 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 PRODH2Q9UF12 536 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 ZNF230Q9UIE0 474 aaPredicted RBP14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 IKZF2Q9UKS7 526 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 FOXJ3Q9UPW0 622 aa14.06□□□□□ -0.16
SHROOM1-201ENST00000319854 F5H5P2 479 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 CLPSP04118 112 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 IL12BP29460 328 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 RAB13P51153 203 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 KLHL26Q53HC5 615 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 ALG10Q5BKT4 473 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 OLFML2AQ68BL7 652 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 OR2AK2Q8NG84 335 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 C2CD4CQ8TF44 421 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 UTP23Q9BRU9 249 aaKnown RBP14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 LANCL2Q9NS86 450 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 ZNF337Q9Y3M9 751 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 LMO7DNF2Z398 122 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 ZNF264O43296 627 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 RLN1P04808 185 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 CDK2P24941 298 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 RBM34P42696 430 aaKnown RBP14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 SIRPAP78324 504 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 ZNF528Q3MIS6 628 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 C1orf216Q8TAB5 229 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 SYNPRQ8TBG9 265 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 ALG12Q9BV10 488 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 NCDNQ9UBB6 729 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 NDRG3Q9UGV2 375 aa14.05□□□□□ -0.16
SHROOM1-201ENST00000319854 CPED1A4D0V7 1026 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 EFCAB7A8K855 629 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 EIF4E2O60573 245 aaKnown RBP14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 AQP8O94778 261 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 HLA-DQA2P01906 255 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 FOSL1P15407 271 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 SRMP19623 302 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 KCNJ3P48549 501 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 TAS2R43P59537 309 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 LTBQ06643 244 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 FAM69BQ5VUD6 431 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 SLC35F3Q8IY50 421 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 ZSCAN1Q8NBB4 408 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 DNAAF1Q8NEP3 725 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 TMEM185AQ8NFB2 350 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 CMSS1Q9BQ75 279 aaKnown RBP14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 RASL12Q9NYN1 266 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 CACNA1EQ15878 2313 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 DOK2O60496 412 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 RORAP35398 523 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 AP3S2P59780 193 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 CDK5R1Q15078 307 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 HYAL4Q2M3T9 481 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 LINC00114Q6XXX2 140 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 ZNF75AQ96N20 296 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 LPAR4Q99677 370 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 SLC19A3Q9BZV2 496 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 SLC25A32Q9H2D1 315 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 NRIP3Q9NQ35 241 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 KLHDC2Q9Y2U9 406 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 TRAV14DV4A0A0A6YYC5 116 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 IFITM5A6NNB3 132 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 OGG1O15527 345 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 F12P00748 615 aaPredicted RBP14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 CSF2RBP32927 897 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 MECP2P51608 486 aaKnown RBP14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 EGR4Q05215 589 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 DMWDQ09019 674 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 FAM209BQ5JX69 171 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 TMEM69Q5SWH9 247 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 OVCH1Q7RTY7 1134 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 SMIM19Q96E16 107 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 TBL1XR1Q9BZK7 514 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 SYT4Q9H2B2 425 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 OR5V1Q9UGF6 321 aa14.04□□□□□ -0.16
SHROOM1-201ENST00000319854 ARL6IP5O75915 188 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 ADCYAP1P18509 176 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 ACTC1P68032 377 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 ACTA1P68133 377 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 ZNF117Q03924 483 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 SCRN3Q0VDG4 424 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 SKP2Q13309 424 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 BEX5Q5H9J7 111 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 WBP2NLQ6ICG8 309 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 DPY19L2P2Q6ZN68 376 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 ZFP82Q8N141 532 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 OR6N2Q8NGY6 317 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 TAAR8Q969N4 342 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 ULBP3Q9BZM4 244 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 AKAP7Q9P0M2 348 aaPredicted RBP14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 GRHPRQ9UBQ7 328 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 IGHV1OR21-1A0A087WYE8 117 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 PIAS2O75928 621 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 PSMD4P55036 377 aaKnown RBP14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 NANOS3P60323 173 aaKnown RBP14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 HSD11B2P80365 405 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 IGLV3-21P80748 117 aaPredicted RBP14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 RPL18Q07020 188 aaKnown RBP14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 PLCXD2Q0VAA5 305 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 PWWP2BQ6NUJ5 590 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms