RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 FAM71F1Q96KD3 344 aaPredicted RBP13.22□□□□□ -0.29
PTPN9-201ENST00000306726 EPHA6Q9UF33 1036 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 C19orf53Q9UNZ5 99 aaPredicted RBP13.22□□□□□ -0.29
PTPN9-201ENST00000306726 ROS1P08922 2347 aa13.22□□□□□ -0.29
PTPN9-201ENST00000306726 A0A1B0GW55 424 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 E9PQ18 207 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 LMX1BO60663 402 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 DUX4L2P0CJ85 424 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 DUX4L3P0CJ86 424 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 DUX4L4P0CJ87 422 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 DUX4L5P0CJ88 424 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 DUX4L6P0CJ89 424 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 DUX4L7P0CJ90 424 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 FRKP42685 505 aaPredicted RBP13.21□□□□□ -0.29
PTPN9-201ENST00000306726 DIO1P49895 249 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 AIMP2Q13155 320 aaKnown RBP13.21□□□□□ -0.29
PTPN9-201ENST00000306726 HNF4GQ14541 408 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 FAM199XQ6PEV8 388 aaPredicted RBP13.21□□□□□ -0.29
PTPN9-201ENST00000306726 BPIFCQ8NFQ6 507 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 ROBO4Q8WZ75 1007 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 DMRTA2Q96SC8 542 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 DUX4Q9UBX2 424 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 CYP8B1Q9UNU6 501 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 POLEQ07864 2286 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 JMJD7P0C870 316 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 IL12BP29460 328 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 NPY4RP50391 375 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 ATP1B3P54709 279 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 EFNB1P98172 346 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 TOMM20Q15388 145 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 TMEM71Q6P5X7 295 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 ZSCAN1Q8NBB4 408 aa13.21□□□□□ -0.29
PTPN9-201ENST00000306726 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.21□□□□□ -0.29
PTPN9-201ENST00000306726 C17orf105B2RV13 164 aa13.21□□□□□ -0.3
PTPN9-201ENST00000306726 M0R036 132 aa13.21□□□□□ -0.3
PTPN9-201ENST00000306726 MPIG6BO95866 241 aa13.21□□□□□ -0.3
PTPN9-201ENST00000306726 SERPINA5P05154 406 aa13.21□□□□□ -0.3
PTPN9-201ENST00000306726 AKAIN1P0CW23 69 aa13.21□□□□□ -0.3
PTPN9-201ENST00000306726 NME2P22392 152 aa13.21□□□□□ -0.3
PTPN9-201ENST00000306726 TRA2BP62995 288 aaKnown RBP13.21□□□□□ -0.3
PTPN9-201ENST00000306726 TRAM1Q15629 374 aa13.21□□□□□ -0.3
PTPN9-201ENST00000306726 KRBOX4Q5JUW0 171 aa13.21□□□□□ -0.3
PTPN9-201ENST00000306726 SLC35F3Q8IY50 421 aa13.21□□□□□ -0.3
PTPN9-201ENST00000306726 DND1Q8IYX4 353 aaKnown RBP13.21□□□□□ -0.3
PTPN9-201ENST00000306726 C16orf52Q8NHV5 167 aa13.21□□□□□ -0.3
PTPN9-201ENST00000306726 PPP1R1CQ8WVI7 109 aa13.21□□□□□ -0.3
PTPN9-201ENST00000306726 EDAQ92838 391 aa13.21□□□□□ -0.3
PTPN9-201ENST00000306726 AHCYL2Q96HN2 611 aaKnown RBP13.21□□□□□ -0.3
PTPN9-201ENST00000306726 SHOXO15266 292 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 PRAMEF2O60811 474 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 IL32P24001 234 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 FMODQ06828 376 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 RPL18Q07020 188 aaKnown RBP13.2□□□□□ -0.3
PTPN9-201ENST00000306726 ADAMTS18Q8TE60 1221 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 LINC00615Q96LM1 132 aaPredicted RBP13.2□□□□□ -0.3
PTPN9-201ENST00000306726 INTS14Q96SY0 518 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 MRPS33Q9Y291 106 aaKnown RBP13.2□□□□□ -0.3
PTPN9-201ENST00000306726 OR5H14A6NHG9 310 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 TXNL1O43396 289 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 HOXD4P09016 255 aaPredicted RBP13.2□□□□□ -0.3
PTPN9-201ENST00000306726 SNU13P55769 128 aaKnown RBP13.2□□□□□ -0.3
PTPN9-201ENST00000306726 HHEXQ03014 270 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 SLC51BQ86UW2 128 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 TSTD1Q8NFU3 115 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 SLC22A18Q96BI1 424 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 CYYR1Q96J86 154 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 MAP3K3Q99759 626 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 D6RAR5 112 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 ADPRHP54922 357 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 FGL1Q08830 312 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 CD226Q15762 336 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 NKAPLQ5M9Q1 402 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 BAIAP2L2Q6UXY1 529 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 OR1S2Q8NGQ3 325 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 SCARB1Q8WTV0 552 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 WDR92Q96MX6 357 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 CRB3Q9BUF7 120 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 MRM2Q9UI43 246 aaKnown RBP13.2□□□□□ -0.3
PTPN9-201ENST00000306726 SLC22A7Q9Y694 548 aa13.2□□□□□ -0.3
PTPN9-201ENST00000306726 KCNJ13O60928 360 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 IGLV3-19P01714 112 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 ITGA5P08648 1049 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 SAMD14Q8IZD0 417 aaPredicted RBP13.19□□□□□ -0.3
PTPN9-201ENST00000306726 SEMA6DQ8NFY4 1073 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 OR2G2Q8NGZ5 317 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 SLC37A2Q8TED4 501 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 ZNF701Q9NV72 531 aaPredicted RBP13.19□□□□□ -0.3
PTPN9-201ENST00000306726 MRPS18AQ9NVS2 196 aaKnown RBP13.19□□□□□ -0.3
PTPN9-201ENST00000306726 MBD2Q9UBB5 411 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 OPN4Q9UHM6 478 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 ZNHIT1O43257 154 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 OR4E1P0C645 316 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 SLC6A9P48067 706 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 PSG6Q00889 435 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 RGP1Q92546 391 aaPredicted RBP13.19□□□□□ -0.3
PTPN9-201ENST00000306726 TSLPQ969D9 159 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 OR2A5Q96R48 311 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 CMSS1Q9BQ75 279 aaKnown RBP13.19□□□□□ -0.3
PTPN9-201ENST00000306726 MED29Q9NX70 200 aa13.19□□□□□ -0.3
PTPN9-201ENST00000306726 TAS2R5Q9NYW4 299 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms