RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 FFAR4Q5NUL3 377 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 MRPL2Q5T653 305 aaKnown RBP12.38□□□□□ -0.43
TRIM56-201ENST00000306085 KDM4DQ6B0I6 523 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 RXFP4Q8TDU9 374 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 GHSRQ92847 366 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 BOD1Q96IK1 185 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 WTIPA6NIX2 430 aaPredicted RBP12.38□□□□□ -0.43
TRIM56-201ENST00000306085 ZNF354AO60765 605 aaPredicted RBP12.38□□□□□ -0.43
TRIM56-201ENST00000306085 IAPPP10997 89 aa12.38□□□□□ -0.43
TRIM56-201ENST00000306085 FYTTD1Q96QD9 318 aaKnown RBP12.38□□□□□ -0.43
TRIM56-201ENST00000306085 SRP9P49458 86 aaKnown RBP12.38□□□□□ -0.43
TRIM56-201ENST00000306085 OR51S1Q8NGJ8 323 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 FAM3DQ96BQ1 224 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 DDOQ99489 341 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 ST6GALNAC4Q9H4F1 302 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 J3KTA2 159 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 SOCS7O14512 581 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 OR1D4P47884 311 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 PMS2P11Q13670 270 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 SLC35E4Q6ICL7 350 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 PQLC3Q8N755 202 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 PIGTQ969N2 578 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 CMTM3Q96MX0 182 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 A0A0J9YY10 115 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 OR6K3Q8NGY3 331 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 EGLN1Q9GZT9 426 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 SIAEQ9HAT2 523 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 JTBO76095 146 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 UBL3O95164 117 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 TCRBP04435 133 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 BCL2L2Q92843 193 aaPredicted RBP12.37□□□□□ -0.43
TRIM56-201ENST00000306085 TMEM221A6NGB7 291 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 GYPAP02724 150 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 SPINT3P49223 89 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 KCTD12Q96CX2 325 aaKnown RBP12.37□□□□□ -0.43
TRIM56-201ENST00000306085 CAPNS2Q96L46 248 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 SIGLEC10Q96LC7 697 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 PRO1933Q9H354 126 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 GALR2O43603 387 aaPredicted RBP12.37□□□□□ -0.43
TRIM56-201ENST00000306085 DEFB133Q30KQ1 61 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 GTDC1Q4AE62 458 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 NAXDQ8IW45 347 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 OR5AS1Q8N127 324 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 LHX4Q969G2 390 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 UFC1Q9Y3C8 167 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 UBE2L5PA0A1B0GUS4 154 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 M0QZ24 198 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 MAN2B1O00754 1011 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 AQP8O94778 261 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 AIFM1O95831 613 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 SLC25A4P12235 298 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 CD40P25942 277 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 OR8G1Q15617 311 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 Q3ZCU0 254 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 LYSMD4Q5XG99 296 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 PLXDC2Q6UX71 529 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 CYHR1Q6ZMK1 362 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 Q6ZN92 141 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 OR4C12Q96R67 309 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 SLC23A1Q9UHI7 598 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 ZNF785A8K8V0 405 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 CDK2AP1O14519 115 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 PCBP4P57723 403 aaKnown RBP12.37□□□□□ -0.43
TRIM56-201ENST00000306085 OR5D13Q8NGL4 314 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 MRPL13Q9BYD1 178 aaKnown RBP12.37□□□□□ -0.43
TRIM56-201ENST00000306085 MSL2Q9HCI7 577 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 WASHC3Q9Y3C0 194 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 SRMP19623 302 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 MTMR14Q8NCE2 650 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 TIMD4Q96H15 378 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 DMAC2Q9NW81 257 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 DUOX1Q9NRD9 1551 aa12.37□□□□□ -0.43
TRIM56-201ENST00000306085 NACAE9PAV3 2078 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 A0A0A6YYC8 382 aaPredicted RBP12.36□□□□□ -0.43
TRIM56-201ENST00000306085 I3L1I5 382 aaPredicted RBP12.36□□□□□ -0.43
TRIM56-201ENST00000306085 SLC35B4Q969S0 331 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 AAMDCQ9H7C9 122 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 CNN1P51911 297 aaKnown RBP12.36□□□□□ -0.43
TRIM56-201ENST00000306085 HBA1P69905 142 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 ERV3-1Q14264 604 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 RHBDD1Q8TEB9 315 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 SLC7A6Q92536 515 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 L3HYPDHQ96EM0 354 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 C11orf54Q9H0W9 315 aaPredicted RBP12.36□□□□□ -0.43
TRIM56-201ENST00000306085 RAB22AQ9UL26 194 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 NEURL1O76050 574 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 ZNF85Q03923 595 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 TMEM135Q86UB9 458 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 PRSS35Q8N3Z0 413 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 HES7Q9BYE0 225 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 ACSS1Q9NUB1 689 aaPredicted RBP12.36□□□□□ -0.43
TRIM56-201ENST00000306085 LAMP3Q9UQV4 416 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 MFAP5Q13361 173 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 TMEM230Q96A57 120 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 GJB5O95377 273 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 GLI4P10075 376 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 PIPP12273 146 aaPredicted RBP12.36□□□□□ -0.43
TRIM56-201ENST00000306085 TGIF2LXQ8IUE1 241 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 KLRG1Q96E93 195 aa12.36□□□□□ -0.43
TRIM56-201ENST00000306085 CSNK1G2P78368 415 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms