RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 C19orf47Q8N9M1 422 aaKnown RBP9.56□□□□□ -0.88
CLIP1-201ENST00000302528 OR10P1Q8NGE3 313 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 ANGPTL6Q8NI99 470 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 TSLPQ969D9 159 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 THOC3Q96J01 351 aaKnown RBP9.56□□□□□ -0.88
CLIP1-201ENST00000302528 VRTNQ9H8Y1 702 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 SPACA1Q9HBV2 294 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 EMC7Q9NPA0 242 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 ACSS1Q9NUB1 689 aaPredicted RBP9.56□□□□□ -0.88
CLIP1-201ENST00000302528 MRPS2Q9Y399 296 aaKnown RBP9.56□□□□□ -0.88
CLIP1-201ENST00000302528 ARNTLO00327 626 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 EN2P19622 333 aaPredicted RBP9.56□□□□□ -0.88
CLIP1-201ENST00000302528 TRIM23P36406 574 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 TAZQ16635 292 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 FA2HQ7L5A8 372 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 ANGPTL5Q86XS5 388 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 MFSD9Q8NBP5 474 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 GPR150Q8NGU9 434 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 GOT1L1Q8NHS2 421 aaPredicted RBP9.56□□□□□ -0.88
CLIP1-201ENST00000302528 LYSMD1Q96S90 227 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 PAAF1Q9BRP4 392 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 LAMA4Q16363 1823 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 CCSO14618 274 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 GASTP01350 101 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 FBP1P09467 338 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 CTXN2P0C2S0 81 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 TNFRSF17Q02223 184 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 ZNF85Q03923 595 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 DUSP6Q16828 381 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 VWA1Q6PCB0 445 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 RANBP10Q6VN20 620 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 TMEM18Q96B42 140 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 GNPNAT1Q96EK6 184 aaPredicted RBP9.56□□□□□ -0.88
CLIP1-201ENST00000302528 STACQ99469 402 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 P2RY12Q9H244 342 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 KCND3Q9UK17 655 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 CORINQ9Y5Q5 1042 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 LRRC3CA6NJW4 275 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 BMPR1BO00238 502 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 PIAS2O75928 621 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 SNAI1O95863 264 aaPredicted RBP9.56□□□□□ -0.88
CLIP1-201ENST00000302528 TACR1P25103 407 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 IL10RAQ13651 578 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 SMN1Q16637 294 aaKnown RBP9.56□□□□□ -0.88
CLIP1-201ENST00000302528 SLC5A12Q1EHB4 618 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 ZNF789Q5FWF6 425 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 TBPL2Q6SJ96 375 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 TFAP2EQ6VUC0 442 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 MBOAT2Q6ZWT7 520 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 PARS2Q7L3T8 475 aaKnown RBP9.56□□□□□ -0.88
CLIP1-201ENST00000302528 NLRC3Q7RTR2 1065 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 SLC7A6Q92536 515 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 RBM14Q96PK6 669 aaKnown RBP9.56□□□□□ -0.88
CLIP1-201ENST00000302528 ARHGDIGQ99819 225 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 ATP13A2Q9NQ11 1180 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 NPAP1Q9NZP6 1156 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 B3GALT5Q9Y2C3 310 aa9.56□□□□□ -0.88
CLIP1-201ENST00000302528 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 SMLR1H3BR10 107 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 AQP9O43315 295 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 C1orf105O95561 183 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 CA3P07451 260 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 TRNP1Q6NT89 227 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 ZNF620Q6ZNG0 422 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 TMEFF1Q8IYR6 380 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 OR2M3Q8NG83 312 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 OR2A1Q8NGT9 310 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 GPR119Q8TDV5 335 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 ZNF583Q96ND8 569 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 XYLT2Q9H1B5 865 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 DCTN6O00399 190 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 LALBAP00709 142 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 CTSCP53634 463 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 MYBPHQ13203 477 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 CMPK2Q5EBM0 449 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 DCXRQ7Z4W1 244 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 DEFB108BQ8NET1 73 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 ZNF480Q8WV37 535 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 LHX4Q969G2 390 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 LCORQ96JN0 433 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-201ENST00000302528 GPR78Q96P69 363 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 TEX50A0A1B0GTY4 177 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 PRSS44E7EML9 344 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 CDC34P49427 236 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-201ENST00000302528 TP53INP2Q8IXH6 220 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 DTWD2Q8NBA8 298 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 MRPS24Q96EL2 167 aaKnown RBP9.55□□□□□ -0.88
CLIP1-201ENST00000302528 CLMPQ9H6B4 373 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 C12orf10Q9HB07 376 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 GDE1Q9NZC3 331 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 POMT1Q9Y6A1 747 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 SLIT2O94813 1529 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 LOC102724200A0A096LPH7 203 aaPredicted RBP9.55□□□□□ -0.88
CLIP1-201ENST00000302528 RFPL4AA6NLU0 287 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 RFPL4AL1F8VTS6 287 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 SH2D1BO14796 132 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 YKT6O15498 198 aa9.55□□□□□ -0.88
CLIP1-201ENST00000302528 PLRG1O43660 514 aaKnown RBP9.55□□□□□ -0.88
CLIP1-201ENST00000302528 GATCO43716 136 aaKnown RBP9.55□□□□□ -0.88
CLIP1-201ENST00000302528 COX7A2P2O60397 106 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms