RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 TPPP2P59282 170 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 ZP2Q05996 745 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 BAMBIQ13145 260 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 ZNF528Q3MIS6 628 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 RTP2Q5QGT7 225 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 GDF7Q7Z4P5 450 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 MMP21Q8N119 569 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 OR51H1Q8NH63 302 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 TSLPQ969D9 159 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 K7EQM0 130 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 ALOX5APP20292 161 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 CASP6P55212 293 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 CLDN2P57739 230 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 MOGAT2Q3SYC2 334 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 TTC9BQ8N6N2 239 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 SLC6A18Q96N87 628 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 ZNF355PQ9NSJ1 428 aa13.68□□□□□ -0.22
SCN3B-201ENST00000299333 RAB29O14966 203 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 CSF3P09919 207 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 SPNP16150 400 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 ETFDHQ16134 617 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 FAM209BQ5JX69 171 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 PRR27Q6MZM9 219 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 NKAIN3Q8N8D7 197 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 OR6K3Q8NGY3 331 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 ZFPM2Q8WW38 1151 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 HHIPQ96QV1 700 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 CTDSP1Q9GZU7 261 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 AQP7P3A6NL99 342 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 GPR75O95800 540 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 CD37P11049 281 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 CSF2RBP32927 897 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 NR0B2Q15466 257 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 PHYHIPQ92561 330 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 C11orf49Q9H6J7 331 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 PCDHB10Q9UN67 800 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 LAMP3Q9UQV4 416 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 ENTPD2Q9Y5L3 495 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 TPOP07202 933 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 PVRP15151 417 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 KIR2DS3Q14952 304 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 Q6ZSR9 355 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 CLEC14AQ86T13 490 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 THNSL2Q86YJ6 484 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 HLA-CQ95604 372 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 AMDHD1Q96NU7 426 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 LYSMD1Q96S90 227 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 SMIM7Q9BQ49 75 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 CHST8Q9H2A9 424 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 CXorf36Q9H7Y0 433 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 GABRQQ9UN88 632 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 RPL12P30050 165 aaKnown RBP13.67□□□□□ -0.22
SCN3B-201ENST00000299333 TMEM268Q5VZI3 342 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 RPL7L1Q6DKI1 246 aaKnown RBP13.67□□□□□ -0.22
SCN3B-201ENST00000299333 PAQR6Q6TCH4 344 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 TMEM104Q8NE00 496 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 CMBLQ96DG6 245 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 AKR1E2Q96JD6 320 aa13.67□□□□□ -0.22
SCN3B-201ENST00000299333 ZC3H12DA2A288 527 aaKnown RBP13.66□□□□□ -0.22
SCN3B-201ENST00000299333 ANKRD61A6NGH8 418 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 FPR3P25089 353 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 OLIG3Q7RTU3 272 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 FUNDC1Q8IVP5 155 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 OR1J2Q8NGS2 313 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 SSUH2Q9Y2M2 353 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 PCDHGA9Q9Y5G4 932 aaKnown RBP13.66□□□□□ -0.22
SCN3B-201ENST00000299333 ROBO1Q9Y6N7 1651 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 P2RY2P41231 377 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 TMEM183BQ1AE95 376 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 SCD5Q86SK9 330 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 BAP18Q8IXM2 172 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 TMEFF1Q8IYR6 380 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 OR5AP2Q8NGF4 316 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 SEH1LQ96EE3 360 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 KIRREL1Q96J84 757 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 C16orf70Q9BSU1 422 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 PRSS16Q9NQE7 514 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 PRDM7Q9NQW5 492 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 TRBV11-1A0A0K0K1C0 115 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 ZBTB37Q5TC79 503 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 GABRG1Q8N1C3 465 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 PELI3Q8N2H9 469 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 TCTN2Q96GX1 697 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 PCED1AQ9H1Q7 454 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 ACOXLQ9NUZ1 547 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 MMP11P24347 488 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 TMEM176BQ3YBM2 270 aaPredicted RBP13.66□□□□□ -0.22
SCN3B-201ENST00000299333 SYT14P1Q58G82 188 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 DPY19L2P2Q6ZN68 376 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 GNPNAT1Q96EK6 184 aaPredicted RBP13.66□□□□□ -0.22
SCN3B-201ENST00000299333 CASD1Q96PB1 797 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 ANKRD12Q6UB98 2062 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 CHD2O14647 1828 aaKnown RBP13.66□□□□□ -0.22
SCN3B-201ENST00000299333 EFSO43281 561 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 SSSCA1O60232 199 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 EIF4EP06730 217 aaKnown RBP13.66□□□□□ -0.22
SCN3B-201ENST00000299333 HBQ1P09105 142 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 MGMTP16455 207 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 ZP3P21754 424 aa13.66□□□□□ -0.22
SCN3B-201ENST00000299333 TEAD1P28347 426 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms