RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 RPS18P62269 152 aaKnown RBP16.12■□□□□ 0.17
CDC42EP3-201ENST00000295324 ANKRD37Q7Z713 158 aa16.12■□□□□ 0.17
CDC42EP3-201ENST00000295324 KCNG2Q9UJ96 466 aa16.12■□□□□ 0.17
CDC42EP3-201ENST00000295324 WDR5BQ86VZ2 330 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 OR14A2Q96R54 314 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 HIPK2Q9H2X6 1198 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 LUZP4Q9P127 313 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 POLDIP2Q9Y2S7 368 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 COL4A1P02462 1669 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 EMDP50402 254 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 C1orf87Q8N0U7 546 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 ZNF808Q8N4W9 903 aaPredicted RBP16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 CEBPZOSA8MTT3 80 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 TBX19O60806 448 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 IFNA17P01571 189 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 HIST1H1CP16403 213 aaKnown RBP16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 AKR1C8PQ5T2L2 129 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 PWWP2BQ6NUJ5 590 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 LPCAT3Q6P1A2 487 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 EMG1Q92979 244 aaKnown RBP16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 UPRTQ96BW1 309 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 S1PR5Q9H228 398 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 M0R135 149 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 DHHO43323 396 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 OPRL1P41146 370 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 MRPL19P49406 292 aaKnown RBP16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 ZNF92Q03936 586 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 SH2D5Q6ZV89 423 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 OR5AS1Q8N127 324 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 GALNT16Q8N428 558 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 WDR34Q96EX3 536 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 ZNF799Q96GE5 643 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 SPACA1Q9HBV2 294 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 MED29Q9NX70 200 aa16.11■□□□□ 0.17
CDC42EP3-201ENST00000295324 NKX2-2O95096 273 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 SPI1P17947 270 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 TNK1Q13470 666 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 FGFBP1Q14512 234 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 AADACL3Q5VUY0 350 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 LIPNQ5VXI9 398 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 SPNS2Q8IVW8 549 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 PPP1R14DQ9NXH3 145 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 A0A096LPE4 126 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 A0A1W2PPZ6 126 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 ANKRD34BA5PLL1 514 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 A6NIN4 97 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 SHC1P29353 583 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 S100A7P31151 101 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 ETV6P41212 452 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 LUMP51884 338 aaPredicted RBP16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 ZNF616Q08AN1 781 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 NKG7Q16617 165 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 ZNF718Q3SXZ3 478 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 BCDIN3DQ7Z5W3 292 aaKnown RBP16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 DCLRE1CQ96SD1 692 aaKnown RBP16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 SLC5A6Q9Y289 635 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 PRSS37A4D1T9 235 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 BTBD17A6NE02 478 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 SNRPBP14678 240 aaKnown RBP16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 NDUFB7P17568 137 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 ARRB2P32121 409 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 DIO1P49895 249 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 CLDN12P56749 244 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 PCBP4P57723 403 aaKnown RBP16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 LSAMPQ13449 338 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 PAN3Q58A45 887 aaKnown RBP16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 OR2L13Q8N349 312 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 POC1BQ8TC44 478 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 OSGIN1Q9UJX0 560 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 ARPC4-TTLL3A0A0A6YYG9 625 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 F5H5P2 479 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 GUSBP08236 651 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 WIPI1Q5MNZ9 446 aaPredicted RBP16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 ZNF793Q6ZN11 406 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 SCCPDHQ8NBX0 429 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 OR52H1Q8NGJ2 320 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 ROBO4Q8WZ75 1007 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 LOXL4Q96JB6 756 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 SAV1Q9H4B6 383 aaPredicted RBP16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 CPNE5Q9HCH3 593 aa16.1■□□□□ 0.17
CDC42EP3-201ENST00000295324 BRWD1Q9NSI6 2320 aa16.09■□□□□ 0.17
CDC42EP3-201ENST00000295324 ZNF26P17031 533 aaPredicted RBP16.09■□□□□ 0.17
CDC42EP3-201ENST00000295324 RBP2P50120 134 aa16.09■□□□□ 0.17
CDC42EP3-201ENST00000295324 SLC38A1Q9H2H9 487 aa16.09■□□□□ 0.17
CDC42EP3-201ENST00000295324 RAB22AQ9UL26 194 aa16.09■□□□□ 0.17
CDC42EP3-201ENST00000295324 GPR55Q9Y2T6 319 aaPredicted RBP16.09■□□□□ 0.17
CDC42EP3-201ENST00000295324 ETV7Q9Y603 341 aa16.09■□□□□ 0.17
CDC42EP3-201ENST00000295324 A0A1B0GTL3 188 aa16.09■□□□□ 0.17
CDC42EP3-201ENST00000295324 A0A1W2PQF6 199 aa16.09■□□□□ 0.17
CDC42EP3-201ENST00000295324 XRCC2O43543 280 aa16.09■□□□□ 0.17
CDC42EP3-201ENST00000295324 UPK1BO75841 260 aa16.09■□□□□ 0.17
CDC42EP3-201ENST00000295324 PAHP00439 452 aa16.09■□□□□ 0.17
CDC42EP3-201ENST00000295324 ZNF133P52736 654 aaPredicted RBP16.09■□□□□ 0.17
CDC42EP3-201ENST00000295324 CLDN6P56747 220 aa16.09■□□□□ 0.17
CDC42EP3-201ENST00000295324 PMS2CLQ68D20 193 aa16.09■□□□□ 0.17
CDC42EP3-201ENST00000295324 KIRREL2Q6UWL6 708 aa16.09■□□□□ 0.17
CDC42EP3-201ENST00000295324 EGFL6Q8IUX8 553 aa16.09■□□□□ 0.17
CDC42EP3-201ENST00000295324 FAM26EQ8N5C1 309 aa16.09■□□□□ 0.17
CDC42EP3-201ENST00000295324 OR51A2Q8NGJ7 313 aa16.09■□□□□ 0.17
CDC42EP3-201ENST00000295324 ZNF419Q96HQ0 510 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms