RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 CTHP32929 405 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 POU3F4P49335 361 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 GPM6BQ13491 265 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 ATP6V1FQ16864 119 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 TP53I3Q53FA7 332 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 APCDD1Q8J025 514 aa5.27□□□□□ -1.57
VCAN-201ENST00000265077 SMG9Q9H0W8 520 aaKnown RBP5.27□□□□□ -1.57
VCAN-201ENST00000265077 ZNF43P17038 809 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 ADRA1AP35348 466 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 PJVKQ0ZLH3 352 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 RAB6CQ53S08 254 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 LGALS14Q8TCE9 139 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 NEIL2Q969S2 332 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 GPR78Q96P69 363 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 RAB6CQ9H0N0 254 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 A4GALTQ9NPC4 353 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 EXOGQ9Y2C4 368 aaKnown RBP5.26□□□□□ -1.57
VCAN-201ENST00000265077 SIGLEC5O15389 551 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 ZNF207O43670 478 aaKnown RBP5.26□□□□□ -1.57
VCAN-201ENST00000265077 CR2P20023 1033 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 FBLP22087 321 aaKnown RBP5.26□□□□□ -1.57
VCAN-201ENST00000265077 HTR6P50406 440 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 DAPP51397 102 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 POLR2HP52434 150 aaKnown RBP5.26□□□□□ -1.57
VCAN-201ENST00000265077 ENTPD8Q5MY95 495 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 PHF19Q5T6S3 580 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 ZNF534Q76KX8 674 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 SIGLECL1Q8N7X8 197 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 ACVR1CQ8NER5 493 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 ABHD4Q8TB40 342 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 FAM122AQ96E09 287 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 TEX101Q9BY14 249 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 SMIM3Q9BZL3 60 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 SLC25A18Q9H1K4 315 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 SPHK2Q9NRA0 654 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 NDRG4Q9ULP0 352 aaKnown RBP5.26□□□□□ -1.57
VCAN-201ENST00000265077 ZNF443Q9Y2A4 671 aaPredicted RBP5.26□□□□□ -1.57
VCAN-201ENST00000265077 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.26□□□□□ -1.57
VCAN-201ENST00000265077 A0A1W2PQU0 124 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 TMEM129A0AVI4 362 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 CLN5O75503 358 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 DVL1P1P54792 670 aaPredicted RBP5.26□□□□□ -1.57
VCAN-201ENST00000265077 OR1Q1Q15612 314 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 UBTD2Q8WUN7 234 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 KIRREL1Q96J84 757 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 NICN1Q9BSH3 213 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 TAS2R5Q9NYW4 299 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 SOCS7O14512 581 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 C1orf105O95561 183 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 ECI1P42126 302 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 EVX1P49640 407 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 WNT7BP56706 349 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 SURF2Q15527 256 aaPredicted RBP5.26□□□□□ -1.57
VCAN-201ENST00000265077 ADIRFQ15847 76 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 SEZ6L2Q6UXD5 910 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 ACOT4Q8N9L9 421 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 ST6GALNAC5Q9BVH7 336 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 IL21RQ9HBE5 538 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 ASCL3Q9NQ33 180 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 EXOSC3Q9NQT5 275 aaKnown RBP5.26□□□□□ -1.57
VCAN-201ENST00000265077 MMP24Q9Y5R2 645 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 SBF1O95248 1867 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 HELZP42694 1942 aaKnown RBP5.26□□□□□ -1.57
VCAN-201ENST00000265077 NPIPB15A6NHN6 443 aaPredicted RBP5.26□□□□□ -1.57
VCAN-201ENST00000265077 F6UZH7 168 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 HLA-HP01893 362 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 SLC6A1P30531 599 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 ARRB2P32121 409 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 MTNR1BP49286 362 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 CXADRP78310 365 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 HSF1Q00613 529 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 SYT17Q9BSW7 474 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 GABARAPL3Q9BY60 117 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 OR52D1Q9H346 318 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 POFUT1Q9H488 388 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 TXNRD2Q9NNW7 524 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 MYOTQ9UBF9 498 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 SUSD2Q9UGT4 822 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 ADAM29Q9UKF5 820 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 FEZF1A0PJY2 475 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 ZNF593O00488 134 aaPredicted RBP5.26□□□□□ -1.57
VCAN-201ENST00000265077 TAAR5O14804 337 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 HNRNPA1P09651 372 aaKnown RBP eCLIP5.26□□□□□ -1.57
VCAN-201ENST00000265077 SULT1A2P50226 295 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 HBA1P69905 142 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 KCTD11Q693B1 232 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 BAP18Q8IXM2 172 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 OR5M9Q8NGP3 310 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 FAM213BQ8TBF2 198 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 CWH43Q9H720 699 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 ZDHHC11Q9H8X9 412 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 TAF9BQ9HBM6 251 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 TNFRSF1BP20333 461 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 RAD52P43351 418 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 MFGE8Q08431 387 aaPredicted RBP5.26□□□□□ -1.57
VCAN-201ENST00000265077 CEBPEQ15744 281 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 ACOT6Q3I5F7 207 aaPredicted RBP5.26□□□□□ -1.57
VCAN-201ENST00000265077 CARD17Q5XLA6 110 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 OR5M10Q6IEU7 315 aa5.26□□□□□ -1.57
VCAN-201ENST00000265077 SLC35G3Q8N808 338 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms