RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 NIT2Q9NQR4 276 aa16.51■□□□□ 0.23
COL5A3-201ENST00000264828 LAMB1P07942 1786 aa16.51■□□□□ 0.23
COL5A3-201ENST00000264828 SOD1P00441 154 aa16.51■□□□□ 0.23
COL5A3-201ENST00000264828 CD14P08571 375 aa16.51■□□□□ 0.23
COL5A3-201ENST00000264828 PAQR6Q6TCH4 344 aa16.51■□□□□ 0.23
COL5A3-201ENST00000264828 C5orf46Q6UWT4 87 aa16.51■□□□□ 0.23
COL5A3-201ENST00000264828 DBX2Q6ZNG2 339 aa16.51■□□□□ 0.23
COL5A3-201ENST00000264828 LGI3Q8N145 548 aa16.51■□□□□ 0.23
COL5A3-201ENST00000264828 TOX2Q96NM4 488 aa16.51■□□□□ 0.23
COL5A3-201ENST00000264828 GINS3Q9BRX5 216 aa16.51■□□□□ 0.23
COL5A3-201ENST00000264828 DEGS1O15121 323 aa16.51■□□□□ 0.23
COL5A3-201ENST00000264828 GLI4P10075 376 aa16.51■□□□□ 0.23
COL5A3-201ENST00000264828 SNRPGP62308 76 aaKnown RBP16.51■□□□□ 0.23
COL5A3-201ENST00000264828 DGCR2P98153 550 aa16.51■□□□□ 0.23
COL5A3-201ENST00000264828 RABEPKQ7Z6M1 372 aa16.51■□□□□ 0.23
COL5A3-201ENST00000264828 A0A0A6YYJ9 748 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 ZNF724A8MTY0 619 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 ACKR3P25106 362 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 LURAP1Q96LR2 239 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 MED9Q9NWA0 146 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 ZNF732B4DXR9 585 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 RAD52P43351 418 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 LIM2P55344 173 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 CSNK1G2P78368 415 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 FAM71E1Q6IPT2 247 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 TMEM207Q6UWW9 146 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 FAM185AQ8N0U4 392 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 OR1J2Q8NGS2 313 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 C1QTNF3Q9BXJ4 246 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 F6UZH7 168 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 CD63P08962 238 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 SLC35D3Q5M8T2 416 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 LRFN5Q96NI6 719 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 TWSG1Q9GZX9 223 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 AK3Q9UIJ7 227 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 LRP5LA4QPB2 252 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 SOCS7O14512 581 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 SLC31A2O15432 143 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 CSF3P09919 207 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 RD3LP0DJH9 198 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 CTRB1P17538 263 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 PRTGQ2VWP7 1150 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 C1orf140Q5VVS0 124 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 CTRB2Q6GPI1 263 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 HIST2H3AQ71DI3 136 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 PRELID3BQ9Y3B1 194 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 DCTN6O00399 190 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 GNB1P62873 340 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 TEKQ02763 1124 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 TAZQ16635 292 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 SYT14P1Q58G82 188 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 SLC7A6Q92536 515 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 ARSGQ96EG1 525 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 SLC46A1Q96NT5 459 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 EMC6Q9BV81 110 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 SLCO5A1Q9H2Y9 848 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 SEMA6CQ9H3T2 930 aa16.5■□□□□ 0.23
COL5A3-201ENST00000264828 TMEM202A6NGA9 273 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 SYT5O00445 386 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 JUNBP17275 347 aaPredicted RBP16.49■□□□□ 0.23
COL5A3-201ENST00000264828 GLCCI1Q86VQ1 547 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 OR10J5Q8NHC4 309 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 ZC3HAV1LQ96H79 300 aaKnown RBP16.49■□□□□ 0.23
COL5A3-201ENST00000264828 KIRREL1Q96J84 757 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 SLC22A12Q96S37 553 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 ISYNA1Q9NPH2 558 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 WSB2Q9NYS7 404 aaPredicted RBP16.49■□□□□ 0.23
COL5A3-201ENST00000264828 PPP1R3CQ9UQK1 317 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 ANKRD61A6NGH8 418 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 SLC35E2P0CK97 266 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 ALOX5APP20292 161 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 GP2P55259 537 aaKnown RBP16.49■□□□□ 0.23
COL5A3-201ENST00000264828 NUMBLQ9Y6R0 609 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 IGHV3-64DA0A0J9YX35 117 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 NKX6-3A6NJ46 265 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 SPINT2O43291 252 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 H2BFWTQ7Z2G1 175 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 TMEM104Q8NE00 496 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 NAT6Q93015 286 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 LTB4R2Q9NPC1 389 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 HS3ST2Q9Y278 367 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 HCFC2Q9Y5Z7 792 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 PLPP1O14494 284 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 ICAM2P13598 275 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 NPPBP16860 134 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 MZB1Q8WU39 189 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 ZDHHC11BP0C7U3 371 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 ECI1P42126 302 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 GRB2P62993 217 aaKnown RBP16.49■□□□□ 0.23
COL5A3-201ENST00000264828 TAGLNQ01995 201 aaKnown RBP16.49■□□□□ 0.23
COL5A3-201ENST00000264828 ADAMTSL4Q6UY14 1074 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 GOT1L1Q8NHS2 421 aaPredicted RBP16.49■□□□□ 0.23
COL5A3-201ENST00000264828 MED30Q96HR3 178 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 DCBLD2Q96PD2 775 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 MARCH5Q9NX47 278 aa16.49■□□□□ 0.23
COL5A3-201ENST00000264828 SCN7AQ01118 1682 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 N4BP2Q86UW6 1770 aaPredicted RBP16.48■□□□□ 0.23
COL5A3-201ENST00000264828 MT-ND4LP03901 98 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 OR2B11Q5JQS5 317 aa16.48■□□□□ 0.23
COL5A3-201ENST00000264828 ABHD17CQ6PCB6 329 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms