RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 SMARCD2Q92925 531 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 LMF1Q96S06 567 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 SEMA6CQ9H3T2 930 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 POLE3Q9NRF9 147 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 FAM96BQ9Y3D0 163 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 ELOA3DA6NLF2 546 aaPredicted RBP13.55□□□□□ -0.24
XRCC1-201ENST00000262887 BLOC1S5-TXNDC5H3BN57 136 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 P2RX6O15547 441 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 FGF17O60258 216 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 DCNP07585 359 aaKnown RBP13.55□□□□□ -0.24
XRCC1-201ENST00000262887 ZBTB25P24278 435 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 CFPP27918 469 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 ABCD3P28288 659 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 CCKBRP32239 447 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 ELOA3BQ3SY89 546 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 ELOA3Q8NG57 546 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 OR4K17Q8NGC6 315 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 OR13C8Q8NGS7 320 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 FOXRED1Q96CU9 486 aaPredicted RBP13.55□□□□□ -0.24
XRCC1-201ENST00000262887 SELENOIQ9C0D9 397 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 SRA1Q9HD15 236 aaKnown RBP13.55□□□□□ -0.24
XRCC1-201ENST00000262887 SMCO4Q9NRQ5 59 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 CREBZFQ9NS37 354 aa13.55□□□□□ -0.24
XRCC1-201ENST00000262887 TVP23AA6NH52 213 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 ARGFXA6NJG6 315 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 SLC17A2O00624 439 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 SDHAP31040 664 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 PBX2P40425 430 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 NAAAQ02083 359 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 ISXQ2M1V0 245 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 OR2B11Q5JQS5 317 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 ACER2Q5QJU3 275 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 TMEM200AQ86VY9 491 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 TMEFF1Q8IYR6 380 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 MCHR2Q969V1 340 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 SLC6A7Q99884 636 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 TEX101Q9BY14 249 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 ZBP1Q9H171 429 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 ZDHHC4Q9NPG8 344 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 MSRAQ9UJ68 235 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 VSIG4Q9Y279 399 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 SPTBP11277 2137 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 SPEGQ15772 3267 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 TEX13DA0A0J9YY54 714 aaPredicted RBP13.54□□□□□ -0.24
XRCC1-201ENST00000262887 GRXCR1A8MXD5 290 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 ADH1AP07327 375 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 CT62P0C5K7 136 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 ZNF28P17035 718 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 AQP2P41181 271 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 RPS27P42677 84 aaKnown RBP13.54□□□□□ -0.24
XRCC1-201ENST00000262887 PRPS1P60891 318 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 ACTR1AP61163 376 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 PPP1R1AQ13522 171 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 RBM39Q14498 530 aaKnown RBP13.54□□□□□ -0.24
XRCC1-201ENST00000262887 TOMM20Q15388 145 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 SLC25A42Q86VD7 318 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 SHISA5Q8N114 240 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 C15orf54Q8N8G6 183 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 OR4E2Q8NGC2 313 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 OR6N2Q8NGY6 317 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 TMEM41AQ96HV5 264 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 PFDN5Q99471 154 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 PHB2Q99623 299 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 A0A0B4J2A0 478 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 DBX1A6NMT0 343 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 EEF1E1-BLOC1S5C9J1V9 151 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 RHOP08100 348 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 AVPR2P30518 371 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 MAP3K8P41279 467 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 FAM53BQ14153 422 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 PRICKLE4Q2TBC4 344 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 MST1LQ2TV78 715 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 RHOUQ7L0Q8 258 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 ZNF550Q7Z398 422 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 CDC20BQ86Y33 519 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 PRSS35Q8N3Z0 413 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 PAQR4Q8N4S7 273 aaPredicted RBP13.54□□□□□ -0.24
XRCC1-201ENST00000262887 WDSUB1Q8N9V3 476 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 PLPP7Q8NBV4 271 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 NT5CQ8TCD5 201 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 MITD1Q8WV92 249 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 DCUN1D4Q92564 292 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 SLCO5A1Q9H2Y9 848 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 ZMAT3Q9HA38 289 aaKnown RBP13.54□□□□□ -0.24
XRCC1-201ENST00000262887 RHOFQ9HBH0 211 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 SHPKQ9UHJ6 478 aa13.54□□□□□ -0.24
XRCC1-201ENST00000262887 LOC100509620A0A075B734 347 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 GPR89AB7ZAQ6 455 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 GPR37O15354 613 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 GPR89BP0CG08 455 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 FAM157CP0CG43 387 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 MUC1P15941 1255 aaPredicted RBP13.53□□□□□ -0.24
XRCC1-201ENST00000262887 PPT1P50897 306 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 RASGEF1BQ0VAM2 473 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 NKPD1Q17RQ9 610 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 C9orf152Q5JTZ5 239 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 C14orf79Q96F83 325 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 EGLN1Q9GZT9 426 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 CSAG2Q9Y5P2 127 aa13.53□□□□□ -0.24
XRCC1-201ENST00000262887 A0A087WUJ7 227 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms