RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 ADCYAP1P18509 176 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 IL11P20809 199 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 PRSS12P56730 875 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 HYAL1Q12794 435 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 CEBPEQ15744 281 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 CA13Q8N1Q1 262 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 BPIFB2Q8N4F0 458 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 TSPAN32Q96QS1 320 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 C12orf57Q99622 126 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 KIR3DX1Q9H7L2 352 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 MBD2Q9UBB5 411 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 MUC22E2RYF6 1773 aaPredicted RBP11.73□□□□□ -0.53
SNX1-201ENST00000261889 KRBOX1C9JBD0 128 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 GLCEO94923 617 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 RPS4Y1P22090 263 aaKnown RBP11.73□□□□□ -0.53
SNX1-201ENST00000261889 MPGP29372 298 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 MAP3K8P41279 467 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 CXADRP78310 365 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 MED25Q71SY5 747 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 ABHD13Q7L211 337 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 LINC00518Q8N0U6 118 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 SYS1Q8N2H4 156 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 SPICQ8N5J4 248 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 FAM160A2Q8N612 972 aaPredicted RBP11.73□□□□□ -0.53
SNX1-201ENST00000261889 TEX19Q8NA77 164 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 NUBPLQ8TB37 319 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 DPYSL5Q9BPU6 564 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 C7orf50Q9BRJ6 194 aaKnown RBP11.73□□□□□ -0.53
SNX1-201ENST00000261889 HDAC8Q9BY41 377 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 S1PR5Q9H228 398 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 HRH4Q9H3N8 390 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 TREM1Q9NP99 234 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 AKAP7Q9P0M2 348 aaPredicted RBP11.73□□□□□ -0.53
SNX1-201ENST00000261889 EPHA6Q9UF33 1036 aa11.73□□□□□ -0.53
SNX1-201ENST00000261889 SHISA8B8ZZ34 492 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 CD34P28906 385 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 GMFBP60983 142 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 RUNX3Q13761 415 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 ZNHIT3Q15649 155 aaPredicted RBP11.72□□□□□ -0.53
SNX1-201ENST00000261889 ATPAF1Q5TC12 328 aaPredicted RBP11.72□□□□□ -0.53
SNX1-201ENST00000261889 GLT8D1Q68CQ7 371 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 HAGHLQ6PII5 290 aaPredicted RBP11.72□□□□□ -0.53
SNX1-201ENST00000261889 OVCH2Q7RTZ1 564 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 GALNTL5Q7Z4T8 443 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 POMGNT2Q8NAT1 580 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 OR1J4Q8NGS1 313 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 ELP5Q8TE02 316 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 FGF14Q92915 247 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 CST11Q9H112 138 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 TMEM184BQ9Y519 407 aaPredicted RBP11.72□□□□□ -0.53
SNX1-201ENST00000261889 B4DGG1 531 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 ABCD4O14678 606 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 HCRTR2O43614 444 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 ZNF254O75437 659 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 B3GALNT1O75752 331 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 ACTL6AO96019 429 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 AKAIN1P0CW23 69 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 GAAP10253 952 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 HLA-DOBP13765 273 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 GNALP38405 381 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 EGR4Q05215 589 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 POU4F2Q12837 409 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 PPP1R1AQ13522 171 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 SLC9A3R2Q15599 337 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 NUDT18Q6ZVK8 323 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 LDLRAD3Q86YD5 345 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 ARMC10Q8N2F6 343 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 BCORP1Q8N888 145 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 CLRN3Q8NCR9 226 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.72□□□□□ -0.53
SNX1-201ENST00000261889 TAAR8Q969N4 342 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 ZNF576Q9H609 170 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 ESRP2Q9H6T0 727 aaKnown RBP11.72□□□□□ -0.53
SNX1-201ENST00000261889 THAP10Q9P2Z0 257 aaPredicted RBP11.72□□□□□ -0.53
SNX1-201ENST00000261889 SERTAD3Q9UJW9 196 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 SLC17A4Q9Y2C5 497 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 EMC9Q9Y3B6 208 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 ZFHX4Q86UP3 3567 aa11.72□□□□□ -0.53
SNX1-201ENST00000261889 KANTRA0A1W2PQU2 76 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 OR6A2O95222 327 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 PGAM2P15259 253 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 TACR3P29371 465 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 NPBWR1P48145 328 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 KLHL26Q53HC5 615 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 UNQ9370/PRO34162Q6UXP9 181 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 FLVCR1-AS1Q8TAF5 88 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 NPRL2Q8WTW4 380 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 NUDT22Q9BRQ3 303 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 SOX7Q9BT81 388 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 HAO2Q9NYQ3 351 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 KLK13Q9UKR3 277 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 MTCH2Q9Y6C9 303 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 A0A1W2PP11 408 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 CTDSPLO15194 276 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 XRCC3O43542 346 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 ADAP1O75689 374 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 PMP2P02689 132 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 CT45A8P0DMV1 189 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 CT45A9P0DMV2 189 aa11.71□□□□□ -0.53
SNX1-201ENST00000261889 GNB3P16520 340 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms