RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 HLXQ14774 488 aaPredicted RBP13.72□□□□□ -0.21
DDX56-201ENST00000258772 SMUG1Q53HV7 270 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 SFRP5Q5T4F7 317 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 ARHGAP40Q5TG30 622 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 KCTD18Q6PI47 426 aaPredicted RBP13.72□□□□□ -0.21
DDX56-201ENST00000258772 TMEM65Q6PI78 240 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 KRT77Q7Z794 578 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 OR1J4Q8NGS1 313 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 FAM174AQ8TBP5 190 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 GPX8Q8TED1 209 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 ASB5Q8WWX0 329 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 DVL3Q92997 716 aaPredicted RBP13.72□□□□□ -0.21
DDX56-201ENST00000258772 WBP1Q96G27 269 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 NKX3-1Q99801 234 aaPredicted RBP13.72□□□□□ -0.21
DDX56-201ENST00000258772 ATG5Q9H1Y0 275 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 DHCR7Q9UBM7 475 aaKnown RBP13.72□□□□□ -0.21
DDX56-201ENST00000258772 DHDHQ9UQ10 334 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 TMED7-TICAM2A0A0A6YYA0 188 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 ARPC5O15511 151 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 WNT11O96014 354 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 LBX1P52954 281 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 UBE2MP61081 183 aaKnown RBP13.72□□□□□ -0.21
DDX56-201ENST00000258772 ADAM8P78325 824 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 SSBP1Q04837 148 aaKnown RBP13.72□□□□□ -0.21
DDX56-201ENST00000258772 MFGE8Q08431 387 aaPredicted RBP13.72□□□□□ -0.21
DDX56-201ENST00000258772 TMEM225Q6GV28 225 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 NDUFAF7Q7L592 441 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 GLRX5Q86SX6 157 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 OR8S1Q8NH09 359 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 SLC25A28Q96A46 364 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 TMED7Q9Y3B3 224 aa13.72□□□□□ -0.21
DDX56-201ENST00000258772 CPAMD8Q8IZJ3 1885 aa13.71□□□□□ -0.21
DDX56-201ENST00000258772 TCRBV16S1A1N1A0A5B0 115 aa13.71□□□□□ -0.21
DDX56-201ENST00000258772 TO15178 435 aa13.71□□□□□ -0.21
DDX56-201ENST00000258772 ZNF35P13682 527 aa13.71□□□□□ -0.21
DDX56-201ENST00000258772 POU3F2P20265 443 aaPredicted RBP13.71□□□□□ -0.21
DDX56-201ENST00000258772 HOXD11P31277 338 aaPredicted RBP13.71□□□□□ -0.21
DDX56-201ENST00000258772 POLR2HP52434 150 aaKnown RBP13.71□□□□□ -0.21
DDX56-201ENST00000258772 PLCXD2Q0VAA5 305 aa13.71□□□□□ -0.21
DDX56-201ENST00000258772 PRAMEF17Q5VTA0 474 aa13.71□□□□□ -0.21
DDX56-201ENST00000258772 GLT8D1Q68CQ7 371 aa13.71□□□□□ -0.21
DDX56-201ENST00000258772 OR7E24Q6IFN5 339 aa13.71□□□□□ -0.21
DDX56-201ENST00000258772 STEAP1BQ6NZ63 245 aa13.71□□□□□ -0.21
DDX56-201ENST00000258772 TMUB2Q71RG4 321 aa13.71□□□□□ -0.21
DDX56-201ENST00000258772 GPAT4Q86UL3 456 aa13.71□□□□□ -0.21
DDX56-201ENST00000258772 C17orf82Q86X59 251 aaPredicted RBP13.71□□□□□ -0.21
DDX56-201ENST00000258772 DEFB119Q8N690 84 aa13.71□□□□□ -0.21
DDX56-201ENST00000258772 ZDHHC12Q96GR4 267 aa13.71□□□□□ -0.21
DDX56-201ENST00000258772 ABHD6Q9BV23 337 aa13.71□□□□□ -0.21
DDX56-201ENST00000258772 CHST6Q9GZX3 395 aa13.71□□□□□ -0.21
DDX56-201ENST00000258772 APMAPQ9HDC9 416 aa13.71□□□□□ -0.21
DDX56-201ENST00000258772 hCG_1807616A0A1W2PRN6 198 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 SLC22A23A1A5C7 686 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 A8MVM7 634 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 F5H5P2 479 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 GOSR2O14653 212 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 ACSM4P0C7M7 580 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 MAP2K6P52564 334 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 RIDAP52758 137 aaKnown RBP13.7□□□□□ -0.22
DDX56-201ENST00000258772 EIF2B1Q14232 305 aaKnown RBP13.7□□□□□ -0.22
DDX56-201ENST00000258772 TOMM20Q15388 145 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 VWA2Q5GFL6 755 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 C1orf140Q5VVS0 124 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 MDGA2Q7Z553 956 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 CATSPERDQ86XM0 798 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 REG4Q9BYZ8 158 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 EXO5Q9H790 373 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 COL5A1P20908 1838 aaPredicted RBP13.7□□□□□ -0.22
DDX56-201ENST00000258772 A0A1W2PPC1 479 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 CD2P06729 351 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 HTR2CP28335 458 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 PNLIPRP2P54317 469 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 NSDHLQ15738 373 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 RAB30Q15771 203 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 DCAF12L2Q5VW00 463 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 B3GNTL1Q67FW5 361 aaPredicted RBP13.7□□□□□ -0.22
DDX56-201ENST00000258772 GABRG1Q8N1C3 465 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 TNFAIP8L1Q8WVP5 186 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 DAZLQ92904 295 aaKnown RBP13.7□□□□□ -0.22
DDX56-201ENST00000258772 SEH1LQ96EE3 360 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 MVB12AQ96EY5 273 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 WWTR1Q9GZV5 400 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 ALX4Q9H161 411 aaPredicted RBP13.7□□□□□ -0.22
DDX56-201ENST00000258772 TMEM138Q9NPI0 162 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 CKLFQ9UBR5 152 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 LRP12Q9Y561 859 aa13.7□□□□□ -0.22
DDX56-201ENST00000258772 UNC13CQ8NB66 2214 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 FXYD6-FXYD2A0A087WZ82 144 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 PLPP3O14495 311 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 RP2O75695 350 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 ITGB2P05107 769 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 CD37P11049 281 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 IGFBP3P17936 291 aaPredicted RBP13.69□□□□□ -0.22
DDX56-201ENST00000258772 ABCD3P28288 659 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 CD38P28907 300 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 ACTBP60709 375 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 ACTG1P63261 375 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 MPPED2Q15777 294 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 DEFB133Q30KQ1 61 aa13.69□□□□□ -0.22
DDX56-201ENST00000258772 GLYATL3Q5SZD4 288 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms