RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 ANGPT1Q15389 498 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 OR7A5Q15622 319 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 ST3GAL2Q16842 350 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 ASPHD2Q6ICH7 369 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 PPP1R3BQ86XI6 285 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 KDM8Q8N371 416 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 OR11G2Q8NGC1 345 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 TSEN15Q8WW01 171 aaKnown RBP14.5□□□□□ -0.09
UBE3D-201ENST00000237186 FOXN4Q96NZ1 517 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 C20orf85Q9H1P6 137 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 RANBP3Q9H6Z4 567 aaPredicted RBP14.5□□□□□ -0.09
UBE3D-201ENST00000237186 ALKBH4Q9NXW9 302 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 NPIPA1Q9UND3 350 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 ING4Q9UNL4 249 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 LRP12Q9Y561 859 aa14.5□□□□□ -0.09
UBE3D-201ENST00000237186 A0A1W2PNV4 684 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 H0YC42 278 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 SLC17A2O00624 439 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 FABP7O15540 132 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 ZNF780AO75290 641 aaPredicted RBP14.49□□□□□ -0.09
UBE3D-201ENST00000237186 DKK1O94907 266 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 TGM6O95932 706 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 ISG15P05161 165 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 IFNGR1P15260 489 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 FSTP19883 344 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 CCKBRP32239 447 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 HSF1Q00613 529 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 TLE3Q04726 772 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 FOXF1Q12946 379 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 TOMM20Q15388 145 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 CLPPQ16740 277 aaPredicted RBP14.49□□□□□ -0.09
UBE3D-201ENST00000237186 HLA-BQ31612 363 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 OTPQ5XKR4 325 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 MRPL14Q6P1L8 145 aaKnown RBP14.49□□□□□ -0.09
UBE3D-201ENST00000237186 GIMAP1Q8WWP7 306 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 ASB5Q8WWX0 329 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 UTP23Q9BRU9 249 aaKnown RBP14.49□□□□□ -0.09
UBE3D-201ENST00000237186 KLHL13Q9P2N7 655 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 PISDQ9UG56 409 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 R4GMQ9 66 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 ALPK2Q86TB3 2170 aa14.49□□□□□ -0.09
UBE3D-201ENST00000237186 A0A1B0GVI7 797 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 YKT6O15498 198 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 EFNA2O43921 213 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 FBXO45P0C2W1 286 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 SULT1A3P0DMM9 295 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 SULT1A4P0DMN0 295 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 FGF5P12034 268 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 ANXA3P12429 323 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 ZNF823P16415 610 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 IGFBP3P17936 291 aaPredicted RBP14.48□□□□□ -0.09
UBE3D-201ENST00000237186 ZXDAP98168 799 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 ODF4Q2M2E3 257 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 TMEM255AQ5JRV8 349 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 CREB3L2Q70SY1 520 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 GLB1L2Q8IW92 636 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 ADPRHL1Q8NDY3 354 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 ST7LQ8TDW4 575 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 GCDHQ92947 438 aaPredicted RBP14.48□□□□□ -0.09
UBE3D-201ENST00000237186 MED30Q96HR3 178 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 CRB3Q9BUF7 120 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 DHDHQ9UQ10 334 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 VDAC3Q9Y277 283 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 RPH3AQ9Y2J0 694 aaPredicted RBP14.48□□□□□ -0.09
UBE3D-201ENST00000237186 MEIKINA0A087WXM9 373 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 SMLR1H3BR10 107 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 H7C417 338 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 KHDRBS3O75525 346 aaKnown RBP14.48□□□□□ -0.09
UBE3D-201ENST00000237186 CD2P06729 351 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 SYPP08247 313 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 ITGA5P08648 1049 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 MECP2P51608 486 aaKnown RBP14.48□□□□□ -0.09
UBE3D-201ENST00000237186 MFGE8Q08431 387 aaPredicted RBP14.48□□□□□ -0.09
UBE3D-201ENST00000237186 PLPPR5Q32ZL2 321 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 SFRP4Q6FHJ7 346 aaPredicted RBP14.48□□□□□ -0.09
UBE3D-201ENST00000237186 TMEM225Q6GV28 225 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 OR7E24Q6IFN5 339 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 LCN10Q6JVE6 187 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 SEZ6L2Q6UXD5 910 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 WDR5BQ86VZ2 330 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 POC1BQ8TC44 478 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 PPP1R14AQ96A00 147 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 PHF21AQ96BD5 680 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 ZFP64Q9NPA5 681 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 KLRF1Q9NZS2 232 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 PPP4R1LQ9P1A2 415 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 MTFP1Q9UDX5 166 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 HRH3Q9Y5N1 445 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 NPTNQ9Y639 398 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 SDK1Q7Z5N4 2213 aa14.48□□□□□ -0.09
UBE3D-201ENST00000237186 MEN1O00255 615 aa14.47□□□□□ -0.09
UBE3D-201ENST00000237186 CTAG2O75638 210 aa14.47□□□□□ -0.09
UBE3D-201ENST00000237186 MPZL1O95297 269 aa14.47□□□□□ -0.09
UBE3D-201ENST00000237186 TMIGD3P0DMS9 266 aaPredicted RBP14.47□□□□□ -0.09
UBE3D-201ENST00000237186 CXCL3P19876 107 aa14.47□□□□□ -0.09
UBE3D-201ENST00000237186 PLA2G7Q13093 441 aa14.47□□□□□ -0.09
UBE3D-201ENST00000237186 NDUFAF7Q7L592 441 aa14.47□□□□□ -0.09
UBE3D-201ENST00000237186 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.47□□□□□ -0.09
UBE3D-201ENST00000237186 C9orf62Q8N4C0 152 aa14.47□□□□□ -0.09
UBE3D-201ENST00000237186 OR51D1Q8NGF3 324 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms