RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 ZNF227Q86WZ6 799 aa18.56■□□□□ 0.56
SNX3-201ENST00000230085 PM20D2Q8IYS1 436 aa18.56■□□□□ 0.56
SNX3-201ENST00000230085 ZNF433Q8N7K0 673 aaPredicted RBP18.56■□□□□ 0.56
SNX3-201ENST00000230085 OR5M1Q8NGP8 315 aa18.56■□□□□ 0.56
SNX3-201ENST00000230085 ZNRF4Q8WWF5 429 aa18.56■□□□□ 0.56
SNX3-201ENST00000230085 FBXW5Q969U6 566 aa18.56■□□□□ 0.56
SNX3-201ENST00000230085 GINS4Q9BRT9 223 aa18.56■□□□□ 0.56
SNX3-201ENST00000230085 APMAPQ9HDC9 416 aa18.56■□□□□ 0.56
SNX3-201ENST00000230085 NPIPA5A0A0B4J1W7 369 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 TLCD2A6NGC4 264 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 GGT3PA6NGU5 568 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 NPIPA7E9PJI5 369 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 PRAMEF2O60811 474 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 ADAM11O75078 769 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 DNAJB6O75190 326 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 NPIPA8P0DM63 369 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 CD37P11049 281 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 GABRA3P34903 492 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 ZNF169Q14929 603 aaPredicted RBP18.55■□□□□ 0.56
SNX3-201ENST00000230085 CFAP77Q6ZQR2 320 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 DGLUCYQ7Z3D6 616 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 FAM220AQ7Z4H9 259 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 SERPINA12Q8IW75 414 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 CLRN3Q8NCR9 226 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 OR5AK2Q8NH90 309 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 CCDC107Q8WV48 283 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 UPB1Q9UBR1 384 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 SCN3AQ9NY46 2000 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 DNASE2O00115 360 aaPredicted RBP18.55■□□□□ 0.56
SNX3-201ENST00000230085 P2RX6O15547 441 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 FGF17O60258 216 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 ZNF35P13682 527 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 ST6GAL1P15907 406 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 FGL1Q08830 312 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 ETFDHQ16134 617 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 DEFB134Q4QY38 66 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 FIGNL1Q6PIW4 674 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 UQCC3Q6UW78 93 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 OR4N5Q8IXE1 308 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 MUC20Q8N307 709 aaPredicted RBP18.55■□□□□ 0.56
SNX3-201ENST00000230085 GPR148Q8TDV2 347 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 MCHR2Q969V1 340 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 ALG12Q9BV10 488 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 ZNF416Q9BWM5 594 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 BARX1Q9HBU1 254 aaPredicted RBP18.55■□□□□ 0.56
SNX3-201ENST00000230085 GPR160Q9UJ42 338 aa18.55■□□□□ 0.56
SNX3-201ENST00000230085 TMEM212A6NML5 194 aa18.54■□□□□ 0.56
SNX3-201ENST00000230085 OR4C45A6NMZ5 311 aa18.54■□□□□ 0.56
SNX3-201ENST00000230085 PRR32B1ATL7 298 aa18.54■□□□□ 0.56
SNX3-201ENST00000230085 CDC123O75794 336 aaPredicted RBP18.54■□□□□ 0.56
SNX3-201ENST00000230085 CBX7O95931 251 aa18.54■□□□□ 0.56
SNX3-201ENST00000230085 ITPKBP27987 946 aa18.54■□□□□ 0.56
SNX3-201ENST00000230085 CCKBRP32239 447 aa18.54■□□□□ 0.56
SNX3-201ENST00000230085 SNRPNP63162 240 aaKnown RBP18.54■□□□□ 0.56
SNX3-201ENST00000230085 EGR3Q06889 387 aa18.54■□□□□ 0.56
SNX3-201ENST00000230085 PCGF3Q3KNV8 242 aa18.54■□□□□ 0.56
SNX3-201ENST00000230085 LRFN4Q6PJG9 635 aa18.54■□□□□ 0.56
SNX3-201ENST00000230085 KIRREL2Q6UWL6 708 aa18.54■□□□□ 0.56
SNX3-201ENST00000230085 TMPRSS7Q7RTY8 843 aa18.54■□□□□ 0.56
SNX3-201ENST00000230085 ZAR1Q86SH2 424 aa18.54■□□□□ 0.56
SNX3-201ENST00000230085 CDC20BQ86Y33 519 aa18.54■□□□□ 0.56
SNX3-201ENST00000230085 CLEC1AQ8NC01 280 aa18.54■□□□□ 0.56
SNX3-201ENST00000230085 PXT1Q8NFP0 134 aa18.54■□□□□ 0.56
SNX3-201ENST00000230085 WDR89Q96FK6 387 aaPredicted RBP18.54■□□□□ 0.56
SNX3-201ENST00000230085 NMNAT3Q96T66 252 aa18.54■□□□□ 0.56
SNX3-201ENST00000230085 SLC25A21Q9BQT8 299 aaPredicted RBP18.54■□□□□ 0.56
SNX3-201ENST00000230085 ZNF768Q9H5H4 540 aaKnown RBP18.54■□□□□ 0.56
SNX3-201ENST00000230085 PCDHB16Q9NRJ7 776 aa18.54■□□□□ 0.56
SNX3-201ENST00000230085 SEMA5BQ9P283 1151 aa18.54■□□□□ 0.56
SNX3-201ENST00000230085 HIF3AQ9Y2N7 669 aa18.54■□□□□ 0.56
SNX3-201ENST00000230085 A0A0J9YY10 115 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 TMEM272A0A1B0GTI8 110 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 TOX3O15405 576 aaPredicted RBP18.53■□□□□ 0.56
SNX3-201ENST00000230085 SLC35E2P0CK97 266 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 SLC25A4P12235 298 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 HLA-GP17693 338 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 EMDP50402 254 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 FOXC1Q12948 553 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 C2orf68Q2NKX9 166 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 EMC4Q5J8M3 183 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 PABPC1L2AQ5JQF8 200 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 CLVS2Q5SYC1 327 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 ZNF440Q8IYI8 595 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 DMRTA2Q96SC8 542 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 TTTY10Q9BZA0 68 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 MFFQ9GZY8 342 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 SCPEP1Q9HB40 452 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 MRM2Q9UI43 246 aaKnown RBP18.53■□□□□ 0.56
SNX3-201ENST00000230085 PRELID3BQ9Y3B1 194 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 ZNF175Q9Y473 711 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 A0A1B0GTI1 187 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 FOXS1O43638 330 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 CTAG2O75638 210 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 CLDN12P56749 244 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 ACTBP60709 375 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 ACTG1P63261 375 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 TRA2AQ13595 282 aaKnown RBP eCLIP18.53■□□□□ 0.56
SNX3-201ENST00000230085 FCRL6Q6DN72 434 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 FAM166AQ6J272 317 aa18.53■□□□□ 0.56
SNX3-201ENST00000230085 FAM122BQ7Z309 247 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms