RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 ST7LQ8TDW4 575 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 PPP1R1CQ8WVI7 109 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 RADILQ96JH8 1075 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 ADGRL4Q9HBW9 690 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 SPTAN1Q13813 2472 aaKnown RBP12.52□□□□□ -0.41
NFKB1-201ENST00000226574 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 PLPP2O43688 288 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 F10P00742 488 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 MYF5P13349 255 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 ZNF93P35789 620 aaPredicted RBP12.52□□□□□ -0.41
NFKB1-201ENST00000226574 RPS27AP62979 156 aaKnown RBP12.52□□□□□ -0.41
NFKB1-201ENST00000226574 UBA52P62987 128 aaKnown RBP12.52□□□□□ -0.41
NFKB1-201ENST00000226574 MEF2DQ14814 521 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 FAM189A2Q15884 450 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 ZNF770Q6IQ21 691 aaPredicted RBP12.52□□□□□ -0.41
NFKB1-201ENST00000226574 STK35Q8TDR2 534 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 FBLIM1Q8WUP2 373 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 PIGTQ969N2 578 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 ZNF304Q9HCX3 659 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 POLE3Q9NRF9 147 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 GLS2Q9UI32 602 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 MOKQ9UQ07 419 aa12.52□□□□□ -0.41
NFKB1-201ENST00000226574 QSER1Q2KHR3 1735 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 ZNF638Q14966 1978 aaKnown RBP12.51□□□□□ -0.41
NFKB1-201ENST00000226574 DUX1O43812 170 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 OR4E1P0C645 316 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 C14orf28Q4W4Y0 310 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 EXOSC6Q5RKV6 272 aaKnown RBP12.51□□□□□ -0.41
NFKB1-201ENST00000226574 ZNF595Q8IYB9 648 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 RFLNBQ8N5W9 214 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 OR10AC1Q8NH08 325 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 CXorf58Q96LI9 332 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 SORCS2Q96PQ0 1159 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 SIGLEC11Q96RL6 698 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 SULT4A1Q9BR01 284 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 OR52A1Q9UKL2 312 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 TBX21Q9UL17 535 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 LOC107986453A0A1B0GWG9 222 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 EML2O95834 649 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 PRTGQ2VWP7 1150 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 Q5BKY6 102 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 COMTD1Q86VU5 262 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 SLC2A12Q8TD20 617 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 MARC2Q969Z3 335 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 LCORQ96JN0 433 aaPredicted RBP12.51□□□□□ -0.41
NFKB1-201ENST00000226574 DCBLD2Q96PD2 775 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 OR5V1Q9UGF6 321 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 NRXN2Q9P2S2 1712 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 RPS10-NUDT3A0A1W2PQS6 291 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 FAM221AA4D161 298 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 BRINP1O60477 761 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 ATG12O94817 140 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 CD80P33681 288 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 RPS10P46783 165 aaKnown RBP12.51□□□□□ -0.41
NFKB1-201ENST00000226574 SLC6A8P48029 635 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 HNRNPKP61978 463 aaKnown RBP eCLIP12.51□□□□□ -0.41
NFKB1-201ENST00000226574 IAH1Q2TAA2 248 aaPredicted RBP12.51□□□□□ -0.41
NFKB1-201ENST00000226574 TMEM196Q5HYL7 178 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 MUC20Q8N307 709 aaPredicted RBP12.51□□□□□ -0.41
NFKB1-201ENST00000226574 KTI12Q96EK9 354 aaPredicted RBP12.51□□□□□ -0.41
NFKB1-201ENST00000226574 PRMT8Q9NR22 394 aaPredicted RBP12.51□□□□□ -0.41
NFKB1-201ENST00000226574 TAS2R5Q9NYW4 299 aa12.51□□□□□ -0.41
NFKB1-201ENST00000226574 SNRNP200O75643 2136 aaKnown RBP12.5□□□□□ -0.41
NFKB1-201ENST00000226574 TMIGD3P0DMS9 266 aaPredicted RBP12.5□□□□□ -0.41
NFKB1-201ENST00000226574 CD1CP29017 333 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 SNTB1Q13884 538 aaKnown RBP12.5□□□□□ -0.41
NFKB1-201ENST00000226574 CLINT1Q14677 625 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 SYS1Q8N2H4 156 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 MARCH1Q8TCQ1 289 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 LINC00052Q96N35 136 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 STACQ99469 402 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 MRPS28Q9Y2Q9 187 aaKnown RBP12.5□□□□□ -0.41
NFKB1-201ENST00000226574 CSAG2Q9Y5P2 127 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 URGCP-MRPS24S4R325 110 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 SHISA3A0PJX4 238 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 C9J4A7 227 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 HRKO00198 91 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 LILRB3O75022 631 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 SNAPC5O75971 98 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 IL33O95760 270 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 GNB3P16520 340 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 CDKN2AP42771 156 aaKnown RBP12.5□□□□□ -0.41
NFKB1-201ENST00000226574 GFERP55789 205 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 GLIPR1L1Q6UWM5 242 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 C16orf47Q6ZP98 133 aaPredicted RBP12.5□□□□□ -0.41
NFKB1-201ENST00000226574 PLXDC1Q8IUK5 500 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 OR1J2Q8NGS2 313 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 FGF14Q92915 247 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 KCNS2Q9ULS6 477 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 LSM2Q9Y333 95 aaKnown RBP12.5□□□□□ -0.41
NFKB1-201ENST00000226574 OR7C1O76099 320 aaPredicted RBP12.5□□□□□ -0.41
NFKB1-201ENST00000226574 SNAPINO95295 136 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 PMS2P2O95744 297 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 CFDP00746 253 aaPredicted RBP12.5□□□□□ -0.41
NFKB1-201ENST00000226574 CXCL10P02778 98 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 FOSL2P15408 326 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 RPA2P15927 270 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 ALOX5APP20292 161 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 SDHAP31040 664 aa12.5□□□□□ -0.41
NFKB1-201ENST00000226574 DRD3P35462 400 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms