RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 OR10X1Q8NGY0 326 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 SAT2Q96F10 170 aaPredicted RBP12.49□□□□□ -0.41
SIX4-201ENST00000216513 Q96M85 177 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 NIPSNAP1Q9BPW8 284 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 RAB1BQ9H0U4 201 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 ASF1BQ9NVP2 202 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 RPH3ALQ9UNE2 315 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 A0A1B0GTH9 108 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 SLC34A2O95436 690 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 FAM87AP0C7U9 286 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 FGFBP1Q14512 234 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 DPY19L2P2Q6ZN68 376 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 SLC25A45Q8N413 288 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 CCL17Q92583 94 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 CLDN24A6NM45 220 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 HNF1AP20823 631 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 FZD5Q13467 585 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 SLC22A18ASQ8N1D0 253 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 DENRO43583 198 aaKnown RBP12.49□□□□□ -0.41
SIX4-201ENST00000216513 CD14P08571 375 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 ACP2P11117 423 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 SNRPBP14678 240 aaKnown RBP12.49□□□□□ -0.41
SIX4-201ENST00000216513 RNPS1Q15287 305 aaKnown RBP12.49□□□□□ -0.41
SIX4-201ENST00000216513 CEACAM16Q2WEN9 425 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 ACSM3Q53FZ2 586 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 RNASE10Q5GAN6 216 aaKnown RBP12.49□□□□□ -0.41
SIX4-201ENST00000216513 SPARTQ8N0X7 666 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 TMEM171Q8WVE6 324 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 SLAMF9Q96A28 289 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 SYT3Q9BQG1 590 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 ASH2LQ9UBL3 628 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 IFNA17P01571 189 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 RPS27P42677 84 aaKnown RBP12.49□□□□□ -0.41
SIX4-201ENST00000216513 CAV2P51636 162 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 RPS25P62851 125 aaKnown RBP12.49□□□□□ -0.41
SIX4-201ENST00000216513 PMP22Q01453 160 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 RHEBQ15382 184 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 USP51Q70EK9 711 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 FAM71CQ8NEG0 241 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 OR2Z1Q8NG97 314 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 COX14Q96I36 57 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 MMP27Q9H306 513 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 TNFRSF12AQ9NP84 129 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 SIDT1Q9NXL6 827 aaKnown RBP12.49□□□□□ -0.41
SIX4-201ENST00000216513 MEX3AA1L020 520 aaKnown RBP12.48□□□□□ -0.41
SIX4-201ENST00000216513 DEGS1O15121 323 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 SRP9P49458 86 aaKnown RBP12.48□□□□□ -0.41
SIX4-201ENST00000216513 FOXL2P58012 376 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 TSPAN31Q12999 210 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 FBXW12Q6X9E4 464 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 CMSS1Q9BQ75 279 aaKnown RBP12.48□□□□□ -0.41
SIX4-201ENST00000216513 CACNG6Q9BXT2 260 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 KIAA1217Q5T5P2 1943 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 LINC01387J3KSC0 135 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 CTDSP2O14595 271 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 GRB2P62993 217 aaKnown RBP12.48□□□□□ -0.41
SIX4-201ENST00000216513 HFEQ30201 348 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 GGHQ92820 318 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 ZNF346Q9UL40 294 aaKnown RBP12.48□□□□□ -0.41
SIX4-201ENST00000216513 IFNA5P01569 189 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 NID1P14543 1247 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 PRKACAP17612 351 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 UGT2B10P36537 528 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 ZNF547Q8IVP9 402 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 CCDC71LQ8N9Z2 235 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 FAM210AQ96ND0 272 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 NIPAL2Q9H841 368 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 GPR173Q9NS66 373 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 ADAMTS7Q9UKP4 1686 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 DOCK5Q9H7D0 1870 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 SLC9A3R2Q15599 337 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 DCUN1D4Q92564 292 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 BARHL1Q9BZE3 327 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 MAB21L2Q9Y586 359 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 B4E171 279 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 FCMRO60667 390 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 ETHE1O95571 254 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 TSPAN7P41732 249 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 ARL6IP1Q15041 203 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 ZNF385BQ569K4 471 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 UGT2A3Q6UWM9 527 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 OR10D3Q8NH80 312 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 TMEM163Q8TC26 289 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 MED17Q9NVC6 651 aa12.48□□□□□ -0.41
SIX4-201ENST00000216513 SPINT2O43291 252 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 SLC16A9Q7RTY1 509 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 ERRFI1Q9UJM3 462 aaPredicted RBP12.47□□□□□ -0.41
SIX4-201ENST00000216513 PPIL1Q9Y3C6 166 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 DOCK3Q8IZD9 2030 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 IL7P13232 177 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 KLRB1Q12918 225 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 PAN3Q58A45 887 aaKnown RBP12.47□□□□□ -0.41
SIX4-201ENST00000216513 CMTM4Q8IZR5 234 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 TMEM99Q8N816 258 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 STEAP2Q8NFT2 490 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 PLEKHA3Q9HB20 300 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 NOX3Q9HBY0 568 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 CLEC2DQ9UHP7 191 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 MOKQ9UQ07 419 aa12.47□□□□□ -0.41
SIX4-201ENST00000216513 A0A087WV62 115 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms