RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 LDOC1O95751 146 aaPredicted RBP7.4□□□□□ -1.22
VAMP3-201ENST00000054666 TCRBP04435 133 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 ADRB1P08588 477 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 GSTT2BP0CG30 244 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 ZNF28P17035 718 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 ADRA2CP18825 462 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 FKBP2P26885 142 aaKnown RBP7.4□□□□□ -1.22
VAMP3-201ENST00000054666 BTCP35070 178 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 AGFG1P52594 562 aaKnown RBP7.4□□□□□ -1.22
VAMP3-201ENST00000054666 BIDP55957 195 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 CLRN1P58418 232 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 MAB21L1Q13394 359 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 SNTA1Q13424 505 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 SNTB2Q13425 540 aaKnown RBP7.4□□□□□ -1.22
VAMP3-201ENST00000054666 PRSS45Q7RTY3 260 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 DCXRQ7Z4W1 244 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.4□□□□□ -1.22
VAMP3-201ENST00000054666 BMPERQ8N8U9 685 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 FCAMRQ8WWV6 532 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 MCHR2Q969V1 340 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 DACT3Q96B18 629 aaPredicted RBP7.4□□□□□ -1.22
VAMP3-201ENST00000054666 PHF21AQ96BD5 680 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 ZBTB8AQ96BR9 441 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 FYTTD1Q96QD9 318 aaKnown RBP7.4□□□□□ -1.22
VAMP3-201ENST00000054666 OR5B2Q96R09 309 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 TMEM185BQ9H7F4 350 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 PLEKHA1Q9HB21 404 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 FANCFQ9NPI8 374 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 ANKRD10Q9NXR5 420 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 FOXJ3Q9UPW0 622 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 POLR1DQ9Y2S0 133 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 FREM3P0C091 2139 aa7.4□□□□□ -1.22
VAMP3-201ENST00000054666 NAP1L6A6NFF2 107 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 ACOT7O00154 380 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 IGHG1P01857 330 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 HRGP04196 525 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 STOMP27105 288 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 GIFP27352 417 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 ADH6P28332 368 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 PTGS2P35354 604 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 FOLR3P41439 243 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 MC2RQ01718 297 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 MFGE8Q08431 387 aaPredicted RBP7.4□□□□□ -1.23
VAMP3-201ENST00000054666 KLF9Q13886 244 aaPredicted RBP7.4□□□□□ -1.23
VAMP3-201ENST00000054666 RAB11BQ15907 218 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 PRAMEF20Q5VT98 475 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 SLC23A3Q6PIS1 610 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 KLHL24Q6TFL4 600 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 CATSPERDQ86XM0 798 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 LINC00346Q8IVM7 164 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 SERPINA12Q8IW75 414 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 GLB1L2Q8IW92 636 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 NOXO1Q8NFA2 376 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 POC1BQ8TC44 478 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 ITFG2Q969R8 447 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 CACNG6Q9BXT2 260 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 ACTR6Q9GZN1 396 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 MED28Q9H204 178 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 TP63Q9H3D4 680 aaPredicted RBP7.4□□□□□ -1.23
VAMP3-201ENST00000054666 AKIRIN1Q9H9L7 192 aaPredicted RBP7.4□□□□□ -1.23
VAMP3-201ENST00000054666 SLC39A1Q9NY26 324 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 STMN3Q9NZ72 180 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 FBXL2Q9UKC9 423 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 HHLA2Q9UM44 414 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 SLC22A13Q9Y226 551 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 RCE1Q9Y256 329 aa7.4□□□□□ -1.23
VAMP3-201ENST00000054666 A0A087WZY1 265 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 NSG1A0A0A6YYJ2 146 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 TTLL8A6PVC2 850 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 GDF9O60383 454 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 TPPPO94811 219 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 MPZL1O95297 269 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 PNPP00491 289 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 MT-ND4P03905 459 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 H2BFMP0C1H6 154 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 UBCP0CG48 685 aaKnown RBP7.39□□□□□ -1.23
VAMP3-201ENST00000054666 COX6A1P12074 109 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 CCL4P13236 92 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 ACHEP22303 614 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 CDK2P24941 298 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 ERP29P30040 261 aaKnown RBP7.39□□□□□ -1.23
VAMP3-201ENST00000054666 MNDAP41218 407 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 DNASE1L1P49184 302 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 TAS2R20P59543 309 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 GPR85P60893 370 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 ZFP36L1Q07352 338 aaKnown RBP7.39□□□□□ -1.23
VAMP3-201ENST00000054666 NDUFA5Q16718 116 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 GLT8D1Q68CQ7 371 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 DEGS2Q6QHC5 323 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 ZNF704Q6ZNC4 412 aaPredicted RBP7.39□□□□□ -1.23
VAMP3-201ENST00000054666 GPAT4Q86UL3 456 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 CDH24Q86UP0 819 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 MAML2Q8IZL2 1156 aaPredicted RBP7.39□□□□□ -1.23
VAMP3-201ENST00000054666 FADS6Q8N9I5 356 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 OR13C3Q8NGS6 347 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 OR2Y1Q8NGV0 311 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 OR52I2Q8NH67 350 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 M1APQ8TC57 530 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 ZNF700Q9H0M5 742 aa7.39□□□□□ -1.23
VAMP3-201ENST00000054666 PAQR5Q9NXK6 330 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms