RNA–Protein interactions for RNA: ENST00000642072.1

LINC00339-212, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-212ENST00000642072 RIMBP2O15034 1052 aa11.23□□□□□ -0.61
LINC00339-212ENST00000642072 SLC10A3P09131 477 aa11.23□□□□□ -0.61
LINC00339-212ENST00000642072 DOK7Q18PE1 504 aa11.23□□□□□ -0.61
LINC00339-212ENST00000642072 HDGFL1Q5TGJ6 251 aa11.23□□□□□ -0.61
LINC00339-212ENST00000642072 CCDC102AQ96A19 550 aa11.23□□□□□ -0.61
LINC00339-212ENST00000642072 RNF186Q9NXI6 227 aa11.23□□□□□ -0.61
LINC00339-212ENST00000642072 GGA3Q9NZ52 723 aa11.23□□□□□ -0.61
LINC00339-212ENST00000642072 POLR2AP24928 1970 aaKnown RBP11.23□□□□□ -0.61
LINC00339-212ENST00000642072 C6orf229H3BNL8 230 aa11.22□□□□□ -0.61
LINC00339-212ENST00000642072 IRS4O14654 1257 aaPredicted RBP11.22□□□□□ -0.61
LINC00339-212ENST00000642072 ZNF157P51786 506 aaPredicted RBP11.22□□□□□ -0.61
LINC00339-212ENST00000642072 ZNF280AP59817 542 aaPredicted RBP11.22□□□□□ -0.61
LINC00339-212ENST00000642072 RPS8P62241 208 aaKnown RBP11.22□□□□□ -0.61
LINC00339-212ENST00000642072 KIF4BQ2VIQ3 1234 aa11.22□□□□□ -0.61
LINC00339-212ENST00000642072 RBM26Q5T8P6 1007 aaKnown RBP11.22□□□□□ -0.61
LINC00339-212ENST00000642072 C2orf69Q8N8R5 385 aa11.22□□□□□ -0.61
LINC00339-212ENST00000642072 DCPSQ96C86 337 aaKnown RBP11.22□□□□□ -0.61
LINC00339-212ENST00000642072 CDCA5Q96FF9 252 aa11.22□□□□□ -0.61
LINC00339-212ENST00000642072 CFAP44Q96MT7 982 aa11.22□□□□□ -0.61
LINC00339-212ENST00000642072 CSRNP1Q96S65 589 aa11.22□□□□□ -0.61
LINC00339-212ENST00000642072 EYA3Q99504 573 aa11.22□□□□□ -0.61
LINC00339-212ENST00000642072 DBF4Q9UBU7 674 aaPredicted RBP11.22□□□□□ -0.61
LINC00339-212ENST00000642072 TRPA1O75762 1119 aa11.21□□□□□ -0.61
LINC00339-212ENST00000642072 GMLQ99445 158 aa11.21□□□□□ -0.61
LINC00339-212ENST00000642072 CENPFP49454 3210 aa11.2□□□□□ -0.62
LINC00339-212ENST00000642072 RALBP1Q15311 655 aa11.2□□□□□ -0.62
LINC00339-212ENST00000642072 RTL5Q5HYW3 569 aaPredicted RBP11.2□□□□□ -0.62
LINC00339-212ENST00000642072 RASAL3Q86YV0 1011 aa11.2□□□□□ -0.62
LINC00339-212ENST00000642072 SULF1Q8IWU6 871 aa11.2□□□□□ -0.62
LINC00339-212ENST00000642072 CCDC146Q8IYE0 955 aa11.2□□□□□ -0.62
LINC00339-212ENST00000642072 ZBTB38Q8NAP3 1195 aaPredicted RBP11.2□□□□□ -0.62
LINC00339-212ENST00000642072 ZC3H12CQ9C0D7 883 aaKnown RBP11.2□□□□□ -0.62
LINC00339-212ENST00000642072 SEC31BQ9NQW1 1179 aa11.2□□□□□ -0.62
LINC00339-212ENST00000642072 HYPKQ9NX55 129 aa11.2□□□□□ -0.62
LINC00339-212ENST00000642072 PCDH10Q9P2E7 1040 aa11.2□□□□□ -0.62
LINC00339-212ENST00000642072 PSME4Q14997 1843 aa11.2□□□□□ -0.62
LINC00339-212ENST00000642072 BRCA2P51587 3418 aa11.2□□□□□ -0.62
LINC00339-212ENST00000642072 PAPPA2Q9BXP8 1791 aa11.19□□□□□ -0.62
LINC00339-212ENST00000642072 UFL1O94874 794 aa11.19□□□□□ -0.62
LINC00339-212ENST00000642072 SOX10P56693 466 aa11.19□□□□□ -0.62
LINC00339-212ENST00000642072 NEUROD2Q15784 382 aa11.19□□□□□ -0.62
LINC00339-212ENST00000642072 ANGEL2Q5VTE6 544 aaKnown RBP11.19□□□□□ -0.62
LINC00339-212ENST00000642072 RSBN1LQ6PCB5 846 aaPredicted RBP11.19□□□□□ -0.62
LINC00339-212ENST00000642072 AGBL3Q8NEM8 1001 aa11.19□□□□□ -0.62
LINC00339-212ENST00000642072 PITPNM2Q9BZ72 1349 aa11.18□□□□□ -0.62
LINC00339-212ENST00000642072 ZNF853P0CG23 659 aa11.18□□□□□ -0.62
LINC00339-212ENST00000642072 FKBP1BP68106 108 aa11.18□□□□□ -0.62
LINC00339-212ENST00000642072 SCARF1Q14162 830 aa11.18□□□□□ -0.62
LINC00339-212ENST00000642072 DUSP27Q5VZP5 1158 aa11.18□□□□□ -0.62
LINC00339-212ENST00000642072 CTU1Q7Z7A3 348 aaKnown RBP11.18□□□□□ -0.62
LINC00339-212ENST00000642072 REM2Q8IYK8 340 aaPredicted RBP11.18□□□□□ -0.62
LINC00339-212ENST00000642072 RUNDC1Q96C34 613 aa11.18□□□□□ -0.62
LINC00339-212ENST00000642072 MBIPQ9NS73 344 aa11.18□□□□□ -0.62
LINC00339-212ENST00000642072 GGA1Q9UJY5 639 aa11.18□□□□□ -0.62
LINC00339-212ENST00000642072 ZNF646O15015 1829 aaPredicted RBP11.18□□□□□ -0.62
LINC00339-212ENST00000642072 PHAXQ9H814 394 aaKnown RBP11.17□□□□□ -0.62
LINC00339-212ENST00000642072 MYOZ2Q9NPC6 264 aa11.17□□□□□ -0.62
LINC00339-212ENST00000642072 ANKIB1Q9P2G1 1089 aa11.17□□□□□ -0.62
LINC00339-212ENST00000642072 LAS1LQ9Y4W2 734 aaKnown RBP11.17□□□□□ -0.62
LINC00339-212ENST00000642072 AKAP11Q9UKA4 1901 aa11.17□□□□□ -0.62
LINC00339-212ENST00000642072 XDHP47989 1333 aa11.16□□□□□ -0.62
LINC00339-212ENST00000642072 MYBBP1AQ9BQG0 1328 aaKnown RBP11.16□□□□□ -0.62
LINC00339-212ENST00000642072 WTIPA6NIX2 430 aaPredicted RBP11.16□□□□□ -0.62
LINC00339-212ENST00000642072 PCCAP05165 728 aaPredicted RBP11.16□□□□□ -0.62
LINC00339-212ENST00000642072 USP17L8P0C7I0 530 aa11.16□□□□□ -0.62
LINC00339-212ENST00000642072 MOB2Q70IA6 237 aa11.16□□□□□ -0.62
LINC00339-212ENST00000642072 CCDC191Q8NCU4 936 aa11.16□□□□□ -0.62
LINC00339-212ENST00000642072 HPS5Q9UPZ3 1129 aa11.16□□□□□ -0.62
LINC00339-212ENST00000642072 PDE8AO60658 829 aa11.15□□□□□ -0.62
LINC00339-212ENST00000642072 GOLGA2Q08379 1002 aa11.15□□□□□ -0.62
LINC00339-212ENST00000642072 CCDC152Q4G0S7 254 aa11.15□□□□□ -0.62
LINC00339-212ENST00000642072 RIC3Q7Z5B4 369 aa11.15□□□□□ -0.62
LINC00339-212ENST00000642072 PODNQ7Z5L7 613 aa11.15□□□□□ -0.62
LINC00339-212ENST00000642072 MYD88Q99836 296 aa11.15□□□□□ -0.62
LINC00339-212ENST00000642072 ADAMTS8Q9UP79 889 aa11.15□□□□□ -0.62
LINC00339-212ENST00000642072 SCAF8Q9UPN6 1271 aaKnown RBP11.15□□□□□ -0.62
LINC00339-212ENST00000642072 MED23Q9ULK4 1368 aa11.15□□□□□ -0.63
LINC00339-212ENST00000642072 USP17L3A6NCW0 530 aa11.14□□□□□ -0.63
LINC00339-212ENST00000642072 USP17L4A6NCW7 530 aa11.14□□□□□ -0.63
LINC00339-212ENST00000642072 HSP90B1P14625 803 aaKnown RBP11.14□□□□□ -0.63
LINC00339-212ENST00000642072 NBPF9Q3BBW0 867 aa11.14□□□□□ -0.63
LINC00339-212ENST00000642072 NOM1Q5C9Z4 860 aaKnown RBP11.14□□□□□ -0.63
LINC00339-212ENST00000642072 DACT2Q5SW24 774 aa11.14□□□□□ -0.63
LINC00339-212ENST00000642072 PRPF38BQ5VTL8 546 aaKnown RBP11.14□□□□□ -0.63
LINC00339-212ENST00000642072 USP17L1Q7RTZ2 530 aa11.14□□□□□ -0.63
LINC00339-212ENST00000642072 ZNF296Q8WUU4 475 aaPredicted RBP11.14□□□□□ -0.63
LINC00339-212ENST00000642072 JARID2Q92833 1246 aaPredicted RBP11.14□□□□□ -0.63
LINC00339-212ENST00000642072 CCDC85AQ96PX6 553 aaPredicted RBP11.14□□□□□ -0.63
LINC00339-212ENST00000642072 UBE2Q2LH0YL09 131 aa11.13□□□□□ -0.63
LINC00339-212ENST00000642072 ATP2B4P23634 1241 aa11.13□□□□□ -0.63
LINC00339-212ENST00000642072 TM4SF4P48230 202 aa11.13□□□□□ -0.63
LINC00339-212ENST00000642072 PRAMEF18Q5VWM3 479 aa11.13□□□□□ -0.63
LINC00339-212ENST00000642072 ANKRD18AQ8IVF6 992 aa11.13□□□□□ -0.63
LINC00339-212ENST00000642072 METTL22Q9BUU2 404 aaPredicted RBP11.13□□□□□ -0.63
LINC00339-212ENST00000642072 MXD3Q9BW11 206 aa11.13□□□□□ -0.63
LINC00339-212ENST00000642072 CFHR5Q9BXR6 569 aa11.13□□□□□ -0.63
LINC00339-212ENST00000642072 IFT57Q9NWB7 429 aa11.13□□□□□ -0.63
LINC00339-212ENST00000642072 CWC25Q9NXE8 425 aaPredicted RBP11.13□□□□□ -0.63
LINC00339-212ENST00000642072 G3V3G9 751 aa11.12□□□□□ -0.63
LINC00339-212ENST00000642072 WNT10BO00744 389 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms