RNA–Protein interactions for RNA: ENST00000639949.1

PFKFB3-218, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, human

TSL 4

Gene PFKFB3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKFB3-218	ENST00000639949	ARFGEF1	Q9Y6D6	1849 aa		11.27	□□□□□ -0.61
PFKFB3-218	ENST00000639949	XDH	P47989	1333 aa		11.27	□□□□□ -0.61
PFKFB3-218	ENST00000639949	C6orf229	H3BNL8	230 aa		11.26	□□□□□ -0.61
PFKFB3-218	ENST00000639949	UFL1	O94874	794 aa		11.26	□□□□□ -0.61
PFKFB3-218	ENST00000639949	ATP2B4	P23634	1241 aa		11.26	□□□□□ -0.61
PFKFB3-218	ENST00000639949	IARS	P41252	1262 aa	Known RBP	11.26	□□□□□ -0.61
PFKFB3-218	ENST00000639949	ATP8B2	P98198	1209 aa		11.26	□□□□□ -0.61
PFKFB3-218	ENST00000639949	PTPN12	Q05209	780 aa	Known RBP	11.26	□□□□□ -0.61
PFKFB3-218	ENST00000639949	CHRND	Q07001	517 aa		11.26	□□□□□ -0.61
PFKFB3-218	ENST00000639949	C9orf131	Q5VYM1	1079 aa		11.26	□□□□□ -0.61
PFKFB3-218	ENST00000639949	KLHDC4	Q8TBB5	520 aa		11.26	□□□□□ -0.61
PFKFB3-218	ENST00000639949	TBC1D16	Q8TBP0	767 aa		11.26	□□□□□ -0.61
PFKFB3-218	ENST00000639949	CRBN	Q96SW2	442 aa		11.26	□□□□□ -0.61
PFKFB3-218	ENST00000639949	EYA3	Q99504	573 aa		11.26	□□□□□ -0.61
PFKFB3-218	ENST00000639949	PUS3	Q9BZE2	481 aa	Known RBP	11.26	□□□□□ -0.61
PFKFB3-218	ENST00000639949	VPS33B	Q9H267	617 aa		11.26	□□□□□ -0.61
PFKFB3-218	ENST00000639949	RNF181	Q9P0P0	153 aa		11.26	□□□□□ -0.61
PFKFB3-218	ENST00000639949	FBXO3	Q9UK99	471 aa		11.26	□□□□□ -0.61
PFKFB3-218	ENST00000639949	MROH5	Q6ZUA9	1318 aa		11.26	□□□□□ -0.61
PFKFB3-218	ENST00000639949	SRCAP	Q6ZRS2	3230 aa		11.26	□□□□□ -0.61
PFKFB3-218	ENST00000639949	PNMA6E	A0A0J9YXQ4	647 aa		11.25	□□□□□ -0.61
PFKFB3-218	ENST00000639949	EYA2	O00167	538 aa		11.25	□□□□□ -0.61
PFKFB3-218	ENST00000639949	CIAO1	O76071	339 aa		11.25	□□□□□ -0.61
PFKFB3-218	ENST00000639949	PRELP	P51888	382 aa		11.25	□□□□□ -0.61
PFKFB3-218	ENST00000639949	POLA2	Q14181	598 aa		11.25	□□□□□ -0.61
PFKFB3-218	ENST00000639949	LRRC24	Q50LG9	513 aa		11.25	□□□□□ -0.61
PFKFB3-218	ENST00000639949	CEP85	Q6P2H3	762 aa		11.25	□□□□□ -0.61
PFKFB3-218	ENST00000639949	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.25	□□□□□ -0.61
PFKFB3-218	ENST00000639949	COPRS	Q9NQ92	184 aa		11.25	□□□□□ -0.61
PFKFB3-218	ENST00000639949	POLL	Q9UGP5	575 aa		11.25	□□□□□ -0.61
PFKFB3-218	ENST00000639949	LEMD3	Q9Y2U8	911 aa		11.25	□□□□□ -0.61
PFKFB3-218	ENST00000639949	RIPOR2	Q9Y4F9	1068 aa		11.25	□□□□□ -0.61
PFKFB3-218	ENST00000639949	LRRC37A	A6NMS7	1700 aa		11.25	□□□□□ -0.61
PFKFB3-218	ENST00000639949	PPIP5K2	O43314	1243 aa		11.24	□□□□□ -0.61
PFKFB3-218	ENST00000639949	CENPB	P07199	599 aa	Predicted RBP	11.24	□□□□□ -0.61
PFKFB3-218	ENST00000639949	KCNJ4	P48050	445 aa		11.24	□□□□□ -0.61
PFKFB3-218	ENST00000639949	KIAA2012	Q0VF49	1180 aa		11.24	□□□□□ -0.61
PFKFB3-218	ENST00000639949	AOC3	Q16853	763 aa		11.24	□□□□□ -0.61
PFKFB3-218	ENST00000639949	WASHC4	Q2M389	1173 aa		11.24	□□□□□ -0.61
PFKFB3-218	ENST00000639949	METTL24	Q5JXM2	366 aa		11.24	□□□□□ -0.61
PFKFB3-218	ENST00000639949	LARGE2	Q8N3Y3	721 aa		11.24	□□□□□ -0.61
PFKFB3-218	ENST00000639949	HELB	Q8NG08	1087 aa	Predicted RBP	11.24	□□□□□ -0.61
PFKFB3-218	ENST00000639949	SSH3	Q8TE77	659 aa		11.24	□□□□□ -0.61
PFKFB3-218	ENST00000639949	SIL1	Q9H173	461 aa		11.24	□□□□□ -0.61
PFKFB3-218	ENST00000639949	PA2G4	Q9UQ80	394 aa	Known RBP	11.24	□□□□□ -0.61
PFKFB3-218	ENST00000639949	MYH3	P11055	1940 aa		11.23	□□□□□ -0.61
PFKFB3-218	ENST00000639949	HMMR	O75330	724 aa		11.23	□□□□□ -0.61
PFKFB3-218	ENST00000639949	TAF5L	O75529	589 aa		11.23	□□□□□ -0.61
PFKFB3-218	ENST00000639949	IL15	P40933	162 aa	Predicted RBP	11.23	□□□□□ -0.61
PFKFB3-218	ENST00000639949	AAMP	Q13685	434 aa		11.23	□□□□□ -0.61
PFKFB3-218	ENST00000639949	NIM1K	Q8IY84	436 aa		11.23	□□□□□ -0.61
PFKFB3-218	ENST00000639949	JDP2	Q8WYK2	163 aa		11.23	□□□□□ -0.61
PFKFB3-218	ENST00000639949	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.23	□□□□□ -0.61
PFKFB3-218	ENST00000639949	ZNF804B	A4D1E1	1349 aa		11.23	□□□□□ -0.61
PFKFB3-218	ENST00000639949	ZC3H4	Q9UPT8	1303 aa	Known RBP	11.23	□□□□□ -0.61
PFKFB3-218	ENST00000639949	DUOX1	Q9NRD9	1551 aa		11.23	□□□□□ -0.61
PFKFB3-218	ENST00000639949	CACNA1S	Q13698	1873 aa		11.23	□□□□□ -0.61
PFKFB3-218	ENST00000639949		G3V3G9	751 aa		11.22	□□□□□ -0.61
PFKFB3-218	ENST00000639949	RIMBP2	O15034	1052 aa		11.22	□□□□□ -0.61
PFKFB3-218	ENST00000639949	PDE8B	O95263	885 aa		11.22	□□□□□ -0.61
PFKFB3-218	ENST00000639949	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
PFKFB3-218	ENST00000639949	UBE4A	Q14139	1066 aa		11.22	□□□□□ -0.61
PFKFB3-218	ENST00000639949	DCAF8	Q5TAQ9	597 aa		11.22	□□□□□ -0.61
PFKFB3-218	ENST00000639949	ATG9A	Q7Z3C6	839 aa		11.22	□□□□□ -0.61
PFKFB3-218	ENST00000639949	GPR101	Q96P66	508 aa	Predicted RBP	11.22	□□□□□ -0.61
PFKFB3-218	ENST00000639949	CEP126	Q9P2H0	1117 aa		11.22	□□□□□ -0.61
PFKFB3-218	ENST00000639949	MED23	Q9ULK4	1368 aa		11.22	□□□□□ -0.61
PFKFB3-218	ENST00000639949	SURF6	O75683	361 aa	Known RBP	11.21	□□□□□ -0.61
PFKFB3-218	ENST00000639949	YY1	P25490	414 aa		11.21	□□□□□ -0.61
PFKFB3-218	ENST00000639949	C15orf52	Q6ZUT6	534 aa	Known RBP	11.21	□□□□□ -0.61
PFKFB3-218	ENST00000639949	SIRT2	Q8IXJ6	389 aa		11.21	□□□□□ -0.61
PFKFB3-218	ENST00000639949	VGLL2	Q8N8G2	317 aa		11.21	□□□□□ -0.61
PFKFB3-218	ENST00000639949	NOP58	Q9Y2X3	529 aa	Known RBP	11.21	□□□□□ -0.61
PFKFB3-218	ENST00000639949	FER1L6	Q2WGJ9	1857 aa		11.21	□□□□□ -0.62
PFKFB3-218	ENST00000639949	WTIP	A6NIX2	430 aa	Predicted RBP	11.2	□□□□□ -0.62
PFKFB3-218	ENST00000639949	EIF6	P56537	245 aa	Known RBP	11.2	□□□□□ -0.62
PFKFB3-218	ENST00000639949	OS9	Q13438	667 aa	Predicted RBP	11.2	□□□□□ -0.62
PFKFB3-218	ENST00000639949	PUM3	Q15397	648 aa	Known RBP	11.2	□□□□□ -0.62
PFKFB3-218	ENST00000639949	HSP90AB4P	Q58FF6	505 aa		11.2	□□□□□ -0.62
PFKFB3-218	ENST00000639949	EXOC6	Q8TAG9	804 aa		11.2	□□□□□ -0.62
PFKFB3-218	ENST00000639949	ZNRF3	Q9ULT6	936 aa		11.2	□□□□□ -0.62
PFKFB3-218	ENST00000639949	TAF1	P21675	1872 aa		11.2	□□□□□ -0.62
PFKFB3-218	ENST00000639949	LTBP1	Q14766	1721 aa		11.2	□□□□□ -0.62
PFKFB3-218	ENST00000639949	FZD9	O00144	591 aa		11.19	□□□□□ -0.62
PFKFB3-218	ENST00000639949	SNAP23	O00161	211 aa		11.19	□□□□□ -0.62
PFKFB3-218	ENST00000639949	ECE2	O60344	883 aa		11.19	□□□□□ -0.62
PFKFB3-218	ENST00000639949	IFIT1	P09914	478 aa	Known RBP	11.19	□□□□□ -0.62
PFKFB3-218	ENST00000639949	SLC5A1	P13866	664 aa		11.19	□□□□□ -0.62
PFKFB3-218	ENST00000639949	KLRK1	P26718	216 aa		11.19	□□□□□ -0.62
PFKFB3-218	ENST00000639949	TFCP2	Q12800	502 aa		11.19	□□□□□ -0.62
PFKFB3-218	ENST00000639949	DOK7	Q18PE1	504 aa		11.19	□□□□□ -0.62
PFKFB3-218	ENST00000639949	DPY19L2	Q6NUT2	758 aa		11.19	□□□□□ -0.62
PFKFB3-218	ENST00000639949	ERC1	Q8IUD2	1116 aa		11.19	□□□□□ -0.62
PFKFB3-218	ENST00000639949	LPIN2	Q92539	896 aa		11.19	□□□□□ -0.62
PFKFB3-218	ENST00000639949	COA1	Q9GZY4	146 aa		11.19	□□□□□ -0.62
PFKFB3-218	ENST00000639949	DBNDD1	Q9H9R9	158 aa		11.19	□□□□□ -0.62
PFKFB3-218	ENST00000639949	AKAP2	Q9Y2D5	859 aa		11.19	□□□□□ -0.62
PFKFB3-218	ENST00000639949	IRS2	Q9Y4H2	1338 aa		11.18	□□□□□ -0.62
PFKFB3-218	ENST00000639949	FGFR2	P21802	821 aa		11.18	□□□□□ -0.62
PFKFB3-218	ENST00000639949	IRX6	P78412	446 aa	Predicted RBP	11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms