RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 NLRP5P59047 1200 aa21.85■■□□□ 1.09
CACNA1A-257ENST00000638009 XPCQ01831 940 aaPredicted RBP21.85■■□□□ 1.09
CACNA1A-257ENST00000638009 PDE4BQ07343 736 aa21.85■■□□□ 1.09
CACNA1A-257ENST00000638009 NBPF8Q3BBV2 869 aa21.85■■□□□ 1.09
CACNA1A-257ENST00000638009 IDH1O75874 414 aaKnown RBP21.85■■□□□ 1.09
CACNA1A-257ENST00000638009 KCNG4Q8TDN1 519 aa21.85■■□□□ 1.09
CACNA1A-257ENST00000638009 SAMM50Q9Y512 469 aa21.85■■□□□ 1.09
CACNA1A-257ENST00000638009 ABTB2Q8N961 1025 aa21.85■■□□□ 1.09
CACNA1A-257ENST00000638009 MYOM3Q5VTT5 1437 aa21.84■■□□□ 1.09
CACNA1A-257ENST00000638009 HS1BP3Q53T59 392 aa21.84■■□□□ 1.09
CACNA1A-257ENST00000638009 PSMA7O14818 248 aa21.84■■□□□ 1.09
CACNA1A-257ENST00000638009 HMG20BQ9P0W2 317 aa21.84■■□□□ 1.09
CACNA1A-257ENST00000638009 ZMYND15Q9H091 742 aa21.84■■□□□ 1.09
CACNA1A-257ENST00000638009 PHACTR2O75167 634 aa21.84■■□□□ 1.09
CACNA1A-257ENST00000638009 TAF7Q15545 349 aaPredicted RBP21.84■■□□□ 1.09
CACNA1A-257ENST00000638009 SPTY2D1Q68D10 685 aaPredicted RBP21.84■■□□□ 1.09
CACNA1A-257ENST00000638009 UTP11Q9Y3A2 253 aaKnown RBP21.84■■□□□ 1.09
CACNA1A-257ENST00000638009 MRVI1Q9Y6F6 885 aa21.84■■□□□ 1.09
CACNA1A-257ENST00000638009 RUFY3Q7L099 469 aa21.83■■□□□ 1.09
CACNA1A-257ENST00000638009 HSP90AA5PQ58FG0 334 aa21.83■■□□□ 1.09
CACNA1A-257ENST00000638009 RAPGEF2Q9Y4G8 1499 aa21.83■■□□□ 1.08
CACNA1A-257ENST00000638009 STARD3NLO95772 234 aa21.83■■□□□ 1.08
CACNA1A-257ENST00000638009 ZNF213O14771 459 aa21.83■■□□□ 1.08
CACNA1A-257ENST00000638009 VPS18Q9P253 973 aa21.83■■□□□ 1.08
CACNA1A-257ENST00000638009 STAT6P42226 847 aa21.83■■□□□ 1.08
CACNA1A-257ENST00000638009 ZFP91Q96JP5 570 aaPredicted RBP21.82■■□□□ 1.08
CACNA1A-257ENST00000638009 LARSQ9P2J5 1176 aaKnown RBP21.82■■□□□ 1.08
CACNA1A-257ENST00000638009 WDR46O15213 610 aaKnown RBP21.82■■□□□ 1.08
CACNA1A-257ENST00000638009 ITIH3Q06033 890 aa21.82■■□□□ 1.08
CACNA1A-257ENST00000638009 GSDMBQ8TAX9 411 aa21.82■■□□□ 1.08
CACNA1A-257ENST00000638009 KAT6AQ92794 2004 aa21.82■■□□□ 1.08
CACNA1A-257ENST00000638009 ARHGEF2Q92974 986 aaKnown RBP21.82■■□□□ 1.08
CACNA1A-257ENST00000638009 NAA16Q6N069 864 aaPredicted RBP21.82■■□□□ 1.08
CACNA1A-257ENST00000638009 KCNK9Q9NPC2 374 aa21.82■■□□□ 1.08
CACNA1A-257ENST00000638009 SPC25Q9HBM1 224 aa21.81■■□□□ 1.08
CACNA1A-257ENST00000638009 PLCB3Q01970 1234 aa21.81■■□□□ 1.08
CACNA1A-257ENST00000638009 RBBP5Q15291 538 aaKnown RBP21.81■■□□□ 1.08
CACNA1A-257ENST00000638009 LGSNQ5TDP6 509 aa21.81■■□□□ 1.08
CACNA1A-257ENST00000638009 DRC3Q9H069 523 aa21.81■■□□□ 1.08
CACNA1A-257ENST00000638009 RPAP2Q8IXW5 612 aaPredicted RBP21.81■■□□□ 1.08
CACNA1A-257ENST00000638009 IFIT1P09914 478 aaKnown RBP21.81■■□□□ 1.08
CACNA1A-257ENST00000638009 RNF8O76064 485 aa21.8■■□□□ 1.08
CACNA1A-257ENST00000638009 GOLGA8QA0A0J9YX86 632 aa21.8■■□□□ 1.08
CACNA1A-257ENST00000638009 GOLGA8OA6NCC3 632 aa21.8■■□□□ 1.08
CACNA1A-257ENST00000638009 GOLGA8NF8WBI6 632 aa21.8■■□□□ 1.08
CACNA1A-257ENST00000638009 SLC8A3P57103 927 aa21.8■■□□□ 1.08
CACNA1A-257ENST00000638009 CPLX3Q8WVH0 158 aa21.8■■□□□ 1.08
CACNA1A-257ENST00000638009 KIFAP3Q92845 792 aa21.8■■□□□ 1.08
CACNA1A-257ENST00000638009 DACT3Q96B18 629 aaPredicted RBP21.8■■□□□ 1.08
CACNA1A-257ENST00000638009 MYH11P35749 1972 aa21.8■■□□□ 1.08
CACNA1A-257ENST00000638009 SEL1L2Q5TEA6 688 aa21.8■■□□□ 1.08
CACNA1A-257ENST00000638009 RUFY4Q6ZNE9 571 aa21.8■■□□□ 1.08
CACNA1A-257ENST00000638009 SDCCAG3Q96C92 435 aa21.79■■□□□ 1.08
CACNA1A-257ENST00000638009 EEF2P13639 858 aaKnown RBP21.79■■□□□ 1.08
CACNA1A-257ENST00000638009 PPFIA3O75145 1194 aa21.79■■□□□ 1.08
CACNA1A-257ENST00000638009 SYKP43405 635 aa21.79■■□□□ 1.08
CACNA1A-257ENST00000638009 SPATS2Q86XZ4 545 aaKnown RBP21.79■■□□□ 1.08
CACNA1A-257ENST00000638009 AFAP1L1Q8TED9 768 aa21.79■■□□□ 1.08
CACNA1A-257ENST00000638009 INPP5BP32019 993 aa21.79■■□□□ 1.08
CACNA1A-257ENST00000638009 ABCF2Q9UG63 623 aa21.79■■□□□ 1.08
CACNA1A-257ENST00000638009 PALM3A6NDB9 673 aaPredicted RBP21.78■■□□□ 1.08
CACNA1A-257ENST00000638009 E7EVH7 732 aa21.78■■□□□ 1.08
CACNA1A-257ENST00000638009 CCDC124Q96CT7 223 aaKnown RBP21.78■■□□□ 1.08
CACNA1A-257ENST00000638009 MTHFSP49914 203 aa21.78■■□□□ 1.08
CACNA1A-257ENST00000638009 SMARCC2Q8TAQ2 1214 aa21.78■■□□□ 1.08
CACNA1A-257ENST00000638009 MINDY4BA8MYZ0 360 aa21.78■■□□□ 1.08
CACNA1A-257ENST00000638009 BAG3O95817 575 aa21.78■■□□□ 1.08
CACNA1A-257ENST00000638009 CNGA4Q8IV77 575 aa21.78■■□□□ 1.08
CACNA1A-257ENST00000638009 PPP1R1BQ9UD71 204 aaPredicted RBP21.78■■□□□ 1.08
CACNA1A-257ENST00000638009 XAB2Q9HCS7 855 aaKnown RBP21.78■■□□□ 1.08
CACNA1A-257ENST00000638009 NLRP6P59044 892 aa21.77■■□□□ 1.08
CACNA1A-257ENST00000638009 OGFRQ9NZT2 677 aa21.77■■□□□ 1.08
CACNA1A-257ENST00000638009 FLIIQ13045 1269 aa21.77■■□□□ 1.08
CACNA1A-257ENST00000638009 METTL24Q5JXM2 366 aa21.77■■□□□ 1.08
CACNA1A-257ENST00000638009 TCP11L2Q8N4U5 519 aa21.77■■□□□ 1.08
CACNA1A-257ENST00000638009 TERF1P54274 439 aa21.77■■□□□ 1.08
CACNA1A-257ENST00000638009 COG7P83436 770 aa21.77■■□□□ 1.08
CACNA1A-257ENST00000638009 PHLDB3Q6NSJ2 640 aa21.77■■□□□ 1.08
CACNA1A-257ENST00000638009 UBL4BQ8N7F7 174 aa21.77■■□□□ 1.08
CACNA1A-257ENST00000638009 ANKIB1Q9P2G1 1089 aa21.77■■□□□ 1.08
CACNA1A-257ENST00000638009 CCDC42Q96M95 316 aa21.77■■□□□ 1.08
CACNA1A-257ENST00000638009 UBLCP1Q8WVY7 318 aaPredicted RBP21.77■■□□□ 1.07
CACNA1A-257ENST00000638009 RBM42Q9BTD8 480 aaKnown RBP21.77■■□□□ 1.07
CACNA1A-257ENST00000638009 ANKFY1Q9P2R3 1169 aa21.77■■□□□ 1.07
CACNA1A-257ENST00000638009 TMTC2Q8N394 836 aa21.76■■□□□ 1.07
CACNA1A-257ENST00000638009 KRT3P12035 628 aa21.76■■□□□ 1.07
CACNA1A-257ENST00000638009 IDEP14735 1019 aa21.76■■□□□ 1.07
CACNA1A-257ENST00000638009 SOGA1O94964 1423 aa21.76■■□□□ 1.07
CACNA1A-257ENST00000638009 CKAP2LQ8IYA6 745 aa21.76■■□□□ 1.07
CACNA1A-257ENST00000638009 SKILP12757 684 aa21.76■■□□□ 1.07
CACNA1A-257ENST00000638009 NEK11Q8NG66 645 aa21.76■■□□□ 1.07
CACNA1A-257ENST00000638009 C1orf115Q9H7X2 142 aa21.76■■□□□ 1.07
CACNA1A-257ENST00000638009 RIOK3O14730 519 aaKnown RBP21.75■■□□□ 1.07
CACNA1A-257ENST00000638009 CHMP2AO43633 222 aa21.75■■□□□ 1.07
CACNA1A-257ENST00000638009 SYF2O95926 243 aaKnown RBP21.75■■□□□ 1.07
CACNA1A-257ENST00000638009 SLC5A1P13866 664 aa21.75■■□□□ 1.07
CACNA1A-257ENST00000638009 RBM27Q9P2N5 1060 aaKnown RBP21.75■■□□□ 1.07
CACNA1A-257ENST00000638009 AP1ARQ63HQ0 302 aa21.75■■□□□ 1.07
CACNA1A-257ENST00000638009 ARMC9Q7Z3E5 817 aa21.75■■□□□ 1.07
CACNA1A-257ENST00000638009 NKTRP30414 1462 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms