RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 VEGFBP49765 207 aa10.08□□□□□ -0.8
PNKP-229ENST00000637897 CTSWP56202 376 aa10.08□□□□□ -0.8
PNKP-229ENST00000637897 GCKRQ14397 625 aa10.08□□□□□ -0.8
PNKP-229ENST00000637897 DOK7Q18PE1 504 aa10.08□□□□□ -0.8
PNKP-229ENST00000637897 EPHA10Q5JZY3 1008 aa10.08□□□□□ -0.8
PNKP-229ENST00000637897 CIAPIN1Q6FI81 312 aa10.08□□□□□ -0.8
PNKP-229ENST00000637897 TMC4Q7Z404 712 aa10.08□□□□□ -0.8
PNKP-229ENST00000637897 SUPT20HQ8NEM7 779 aa10.08□□□□□ -0.8
PNKP-229ENST00000637897 PLA2G12BQ9BX93 195 aa10.08□□□□□ -0.8
PNKP-229ENST00000637897 MYH3P11055 1940 aa10.07□□□□□ -0.8
PNKP-229ENST00000637897 CACNA1FO60840 1977 aa10.07□□□□□ -0.8
PNKP-229ENST00000637897 POLR2AP24928 1970 aaKnown RBP10.07□□□□□ -0.8
PNKP-229ENST00000637897 ECE2O60344 883 aa10.07□□□□□ -0.8
PNKP-229ENST00000637897 CSF1RP07333 972 aa10.07□□□□□ -0.8
PNKP-229ENST00000637897 HSPA1AP0DMV8 641 aaKnown RBP10.07□□□□□ -0.8
PNKP-229ENST00000637897 HSPA1BP0DMV9 641 aaKnown RBP10.07□□□□□ -0.8
PNKP-229ENST00000637897 KLRK1P26718 216 aa10.07□□□□□ -0.8
PNKP-229ENST00000637897 WASHC4Q2M389 1173 aa10.07□□□□□ -0.8
PNKP-229ENST00000637897 BEND3Q5T5X7 828 aa10.07□□□□□ -0.8
PNKP-229ENST00000637897 USP50Q70EL3 339 aaPredicted RBP10.07□□□□□ -0.8
PNKP-229ENST00000637897 UBE3BQ7Z3V4 1068 aa10.07□□□□□ -0.8
PNKP-229ENST00000637897 PNMA8AQ86V59 439 aaPredicted RBP10.07□□□□□ -0.8
PNKP-229ENST00000637897 TXNRD3Q86VQ6 643 aa10.07□□□□□ -0.8
PNKP-229ENST00000637897 TNS4Q8IZW8 715 aa10.07□□□□□ -0.8
PNKP-229ENST00000637897 DNAAF4Q8WXU2 420 aa10.07□□□□□ -0.8
PNKP-229ENST00000637897 ADARB2Q9NS39 739 aaKnown RBP10.07□□□□□ -0.8
PNKP-229ENST00000637897 CLEC11AQ9Y240 323 aa10.07□□□□□ -0.8
PNKP-229ENST00000637897 SPEF2Q9C093 1822 aa10.07□□□□□ -0.8
PNKP-229ENST00000637897 ASTN2O75129 1339 aaPredicted RBP10.07□□□□□ -0.8
PNKP-229ENST00000637897 IRS2Q9Y4H2 1338 aa10.07□□□□□ -0.8
PNKP-229ENST00000637897 RASSF10A6NK89 507 aa10.06□□□□□ -0.8
PNKP-229ENST00000637897 TMEM88BA6NKF7 163 aa10.06□□□□□ -0.8
PNKP-229ENST00000637897 C6orf229H3BNL8 230 aa10.06□□□□□ -0.8
PNKP-229ENST00000637897 SNAP23O00161 211 aa10.06□□□□□ -0.8
PNKP-229ENST00000637897 DDX58O95786 925 aaKnown RBP10.06□□□□□ -0.8
PNKP-229ENST00000637897 FOXO4P98177 505 aa10.06□□□□□ -0.8
PNKP-229ENST00000637897 CCDC152Q4G0S7 254 aa10.06□□□□□ -0.8
PNKP-229ENST00000637897 SAMD7Q7Z3H4 446 aa10.06□□□□□ -0.8
PNKP-229ENST00000637897 KAZALD1Q96I82 304 aa10.06□□□□□ -0.8
PNKP-229ENST00000637897 GMLQ99445 158 aa10.06□□□□□ -0.8
PNKP-229ENST00000637897 GLIS2Q9BZE0 524 aaPredicted RBP10.06□□□□□ -0.8
PNKP-229ENST00000637897 CNOT7Q9UIV1 285 aaKnown RBP10.06□□□□□ -0.8
PNKP-229ENST00000637897 MINPP1Q9UNW1 487 aa10.06□□□□□ -0.8
PNKP-229ENST00000637897 PSME4Q14997 1843 aa10.05□□□□□ -0.8
PNKP-229ENST00000637897 TRPM7Q96QT4 1865 aa10.05□□□□□ -0.8
PNKP-229ENST00000637897 UFL1O94874 794 aa10.05□□□□□ -0.8
PNKP-229ENST00000637897 VIL1P09327 827 aaKnown RBP10.05□□□□□ -0.8
PNKP-229ENST00000637897 FAM161AQ3B820 660 aa10.05□□□□□ -0.8
PNKP-229ENST00000637897 MICALL2Q8IY33 904 aa10.05□□□□□ -0.8
PNKP-229ENST00000637897 STK31Q9BXU1 1019 aa10.05□□□□□ -0.8
PNKP-229ENST00000637897 FOXN1O15353 648 aa10.04□□□□□ -0.8
PNKP-229ENST00000637897 LMOD1P29536 600 aaPredicted RBP10.04□□□□□ -0.8
PNKP-229ENST00000637897 FKBP5Q13451 457 aaPredicted RBP10.04□□□□□ -0.8
PNKP-229ENST00000637897 LINS1Q8NG48 757 aa10.04□□□□□ -0.8
PNKP-229ENST00000637897 DPF2Q92785 391 aa10.04□□□□□ -0.8
PNKP-229ENST00000637897 CDCA7LQ96GN5 454 aa10.04□□□□□ -0.8
PNKP-229ENST00000637897 MXD3Q9BW11 206 aa10.04□□□□□ -0.8
PNKP-229ENST00000637897 BSDC1Q9NW68 430 aaPredicted RBP10.04□□□□□ -0.8
PNKP-229ENST00000637897 THSD7BQ9C0I4 1608 aa10.04□□□□□ -0.8
PNKP-229ENST00000637897 A0A1B0GUL6 1792 aa10.03□□□□□ -0.8
PNKP-229ENST00000637897 ZNF609O15014 1411 aa10.03□□□□□ -0.8
PNKP-229ENST00000637897 ITGA6P23229 1130 aa10.03□□□□□ -0.8
PNKP-229ENST00000637897 TNIP1Q15025 636 aa10.03□□□□□ -0.8
PNKP-229ENST00000637897 TBC1D10BQ4KMP7 808 aaPredicted RBP10.03□□□□□ -0.8
PNKP-229ENST00000637897 ANKRD18AQ8IVF6 992 aa10.03□□□□□ -0.8
PNKP-229ENST00000637897 TRMT2AQ8IZ69 625 aaKnown RBP10.03□□□□□ -0.8
PNKP-229ENST00000637897 MRPL50Q8N5N7 158 aaKnown RBP10.03□□□□□ -0.8
PNKP-229ENST00000637897 ZIC5Q96T25 663 aa10.03□□□□□ -0.8
PNKP-229ENST00000637897 GGA1Q9UJY5 639 aa10.03□□□□□ -0.8
PNKP-229ENST00000637897 XDHP47989 1333 aa10.03□□□□□ -0.8
PNKP-229ENST00000637897 ZNF280AP59817 542 aaPredicted RBP10.02□□□□□ -0.81
PNKP-229ENST00000637897 SLFN5Q08AF3 891 aa10.02□□□□□ -0.81
PNKP-229ENST00000637897 BCL2L13Q9BXK5 485 aa10.02□□□□□ -0.81
PNKP-229ENST00000637897 TMX4Q9H1E5 349 aaPredicted RBP10.02□□□□□ -0.81
PNKP-229ENST00000637897 WBP1LQ9NX94 342 aa10.02□□□□□ -0.81
PNKP-229ENST00000637897 ANKIB1Q9P2G1 1089 aa10.02□□□□□ -0.81
PNKP-229ENST00000637897 TLL2Q9Y6L7 1015 aa10.02□□□□□ -0.81
PNKP-229ENST00000637897 ATP2B4P23634 1241 aa10.01□□□□□ -0.81
PNKP-229ENST00000637897 CCT4P50991 539 aaKnown RBP10.01□□□□□ -0.81
PNKP-229ENST00000637897 NEXNQ0ZGT2 675 aa10.01□□□□□ -0.81
PNKP-229ENST00000637897 DEFB115Q30KQ5 88 aa10.01□□□□□ -0.81
PNKP-229ENST00000637897 CYP4F22Q6NT55 531 aa10.01□□□□□ -0.81
PNKP-229ENST00000637897 SAPCD2Q86UD0 394 aa10.01□□□□□ -0.81
PNKP-229ENST00000637897 USP48Q86UV5 1035 aa10.01□□□□□ -0.81
PNKP-229ENST00000637897 ZC3H15Q8WU90 426 aaKnown RBP10.01□□□□□ -0.81
PNKP-229ENST00000637897 ZNF594Q96JF6 807 aaPredicted RBP10.01□□□□□ -0.81
PNKP-229ENST00000637897 EYA3Q99504 573 aa10.01□□□□□ -0.81
PNKP-229ENST00000637897 CHMP4AQ9BY43 222 aa10.01□□□□□ -0.81
PNKP-229ENST00000637897 ZC3H12CQ9C0D7 883 aaKnown RBP10.01□□□□□ -0.81
PNKP-229ENST00000637897 SCAF8Q9UPN6 1271 aaKnown RBP10.01□□□□□ -0.81
PNKP-229ENST00000637897 WDR33Q9C0J8 1336 aaKnown RBP10.01□□□□□ -0.81
PNKP-229ENST00000637897 MED23Q9ULK4 1368 aa10.01□□□□□ -0.81
PNKP-229ENST00000637897 ADM5C9JUS6 153 aa10□□□□□ -0.81
PNKP-229ENST00000637897 AOC2O75106 756 aa10□□□□□ -0.81
PNKP-229ENST00000637897 TAF5LO75529 589 aa10□□□□□ -0.81
PNKP-229ENST00000637897 CELF2O95319 508 aaKnown RBP10□□□□□ -0.81
PNKP-229ENST00000637897 NBPF7P0C2Y1 421 aaPredicted RBP10□□□□□ -0.81
PNKP-229ENST00000637897 DACT2Q5SW24 774 aa10□□□□□ -0.81
PNKP-229ENST00000637897 RBM26Q5T8P6 1007 aaKnown RBP10□□□□□ -0.81
PNKP-229ENST00000637897 RSBN1LQ6PCB5 846 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms