RNA–Protein interactions for RNA: ENST00000637052.1

SYNGAP1-219, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-219ENST00000637052 GGA3Q9NZ52 723 aa9.5□□□□□ -0.89
SYNGAP1-219ENST00000637052 ATP5J2-PTCD1G3V325 749 aa9.49□□□□□ -0.89
SYNGAP1-219ENST00000637052 NEFMP07197 916 aa9.49□□□□□ -0.89
SYNGAP1-219ENST00000637052 VIL1P09327 827 aaKnown RBP9.49□□□□□ -0.89
SYNGAP1-219ENST00000637052 SCARF1Q14162 830 aa9.49□□□□□ -0.89
SYNGAP1-219ENST00000637052 HSP90AB3PQ58FF7 597 aa9.49□□□□□ -0.89
SYNGAP1-219ENST00000637052 PRPF38BQ5VTL8 546 aaKnown RBP9.49□□□□□ -0.89
SYNGAP1-219ENST00000637052 PRAMEF18Q5VWM3 479 aa9.49□□□□□ -0.89
SYNGAP1-219ENST00000637052 TBC1D16Q8TBP0 767 aa9.49□□□□□ -0.89
SYNGAP1-219ENST00000637052 UBE2Q2LH0YL09 131 aa9.48□□□□□ -0.89
SYNGAP1-219ENST00000637052 RPS12P25398 132 aaKnown RBP9.48□□□□□ -0.89
SYNGAP1-219ENST00000637052 RIPK4P57078 832 aa9.48□□□□□ -0.89
SYNGAP1-219ENST00000637052 SF3B3Q15393 1217 aaKnown RBP9.48□□□□□ -0.89
SYNGAP1-219ENST00000637052 ANGEL2Q5VTE6 544 aaKnown RBP9.48□□□□□ -0.89
SYNGAP1-219ENST00000637052 SULF1Q8IWU6 871 aa9.48□□□□□ -0.89
SYNGAP1-219ENST00000637052 ZNF296Q8WUU4 475 aaPredicted RBP9.48□□□□□ -0.89
SYNGAP1-219ENST00000637052 ISCA1Q9BUE6 129 aa9.48□□□□□ -0.89
SYNGAP1-219ENST00000637052 R3HDMLQ9H3Y0 253 aa9.48□□□□□ -0.89
SYNGAP1-219ENST00000637052 SEC31BQ9NQW1 1179 aa9.48□□□□□ -0.89
SYNGAP1-219ENST00000637052 WTIPA6NIX2 430 aaPredicted RBP9.47□□□□□ -0.89
SYNGAP1-219ENST00000637052 RPS8P62241 208 aaKnown RBP9.47□□□□□ -0.89
SYNGAP1-219ENST00000637052 MKRN3Q13064 507 aaKnown RBP9.47□□□□□ -0.89
SYNGAP1-219ENST00000637052 TMC4Q7Z404 712 aa9.47□□□□□ -0.89
SYNGAP1-219ENST00000637052 CHPF2Q9P2E5 772 aa9.47□□□□□ -0.89
SYNGAP1-219ENST00000637052 ZNF280AP59817 542 aaPredicted RBP9.46□□□□□ -0.9
SYNGAP1-219ENST00000637052 RSBN1LQ6PCB5 846 aaPredicted RBP9.46□□□□□ -0.9
SYNGAP1-219ENST00000637052 JARID2Q92833 1246 aaPredicted RBP9.46□□□□□ -0.9
SYNGAP1-219ENST00000637052 GMLQ99445 158 aa9.46□□□□□ -0.9
SYNGAP1-219ENST00000637052 EYA3Q99504 573 aa9.46□□□□□ -0.9
SYNGAP1-219ENST00000637052 ZC3H12CQ9C0D7 883 aaKnown RBP9.46□□□□□ -0.9
SYNGAP1-219ENST00000637052 HDAC9Q9UKV0 1011 aa9.46□□□□□ -0.9
SYNGAP1-219ENST00000637052 MAPK8IP3Q9UPT6 1336 aa9.46□□□□□ -0.9
SYNGAP1-219ENST00000637052 MKI67P46013 3256 aaKnown RBP9.45□□□□□ -0.9
SYNGAP1-219ENST00000637052 IRS4O14654 1257 aaPredicted RBP9.45□□□□□ -0.9
SYNGAP1-219ENST00000637052 UFL1O94874 794 aa9.45□□□□□ -0.9
SYNGAP1-219ENST00000637052 TMPOP42166 694 aaKnown RBP9.45□□□□□ -0.9
SYNGAP1-219ENST00000637052 ANKRD13DQ6ZTN6 518 aa9.45□□□□□ -0.9
SYNGAP1-219ENST00000637052 PLBD2Q8NHP8 589 aa9.45□□□□□ -0.9
SYNGAP1-219ENST00000637052 CCDC85AQ96PX6 553 aaPredicted RBP9.45□□□□□ -0.9
SYNGAP1-219ENST00000637052 MXD3Q9BW11 206 aa9.45□□□□□ -0.9
SYNGAP1-219ENST00000637052 LAS1LQ9Y4W2 734 aaKnown RBP9.45□□□□□ -0.9
SYNGAP1-219ENST00000637052 PSME4Q14997 1843 aa9.45□□□□□ -0.9
SYNGAP1-219ENST00000637052 G3V3G9 751 aa9.44□□□□□ -0.9
SYNGAP1-219ENST00000637052 GPR25O00155 361 aa9.44□□□□□ -0.9
SYNGAP1-219ENST00000637052 CHL1O00533 1208 aa9.44□□□□□ -0.9
SYNGAP1-219ENST00000637052 TM4SF4P48230 202 aa9.44□□□□□ -0.9
SYNGAP1-219ENST00000637052 NEUROD2Q15784 382 aa9.44□□□□□ -0.9
SYNGAP1-219ENST00000637052 NBPF9Q3BBW0 867 aa9.44□□□□□ -0.9
SYNGAP1-219ENST00000637052 DCAF8Q5TAQ9 597 aa9.44□□□□□ -0.9
SYNGAP1-219ENST00000637052 MYOZ2Q9NPC6 264 aa9.44□□□□□ -0.9
SYNGAP1-219ENST00000637052 BABAM1Q9NWV8 329 aa9.44□□□□□ -0.9
SYNGAP1-219ENST00000637052 PODXL2Q9NZ53 605 aa9.44□□□□□ -0.9
SYNGAP1-219ENST00000637052 PAPPA2Q9BXP8 1791 aa9.44□□□□□ -0.9
SYNGAP1-219ENST00000637052 USP17L8P0C7I0 530 aa9.43□□□□□ -0.9
SYNGAP1-219ENST00000637052 PRKG1Q13976 671 aa9.43□□□□□ -0.9
SYNGAP1-219ENST00000637052 PKN2Q16513 984 aaKnown RBP9.43□□□□□ -0.9
SYNGAP1-219ENST00000637052 HDGFL1Q5TGJ6 251 aa9.43□□□□□ -0.9
SYNGAP1-219ENST00000637052 CCDC146Q8IYE0 955 aa9.43□□□□□ -0.9
SYNGAP1-219ENST00000637052 REM2Q8IYK8 340 aaPredicted RBP9.43□□□□□ -0.9
SYNGAP1-219ENST00000637052 AGBL3Q8NEM8 1001 aa9.43□□□□□ -0.9
SYNGAP1-219ENST00000637052 ANKIB1Q9P2G1 1089 aa9.43□□□□□ -0.9
SYNGAP1-219ENST00000637052 GGA1Q9UJY5 639 aa9.43□□□□□ -0.9
SYNGAP1-219ENST00000637052 FZD1Q9UP38 647 aa9.43□□□□□ -0.9
SYNGAP1-219ENST00000637052 FKBP1BP68106 108 aa9.42□□□□□ -0.9
SYNGAP1-219ENST00000637052 PTPN12Q05209 780 aaKnown RBP9.42□□□□□ -0.9
SYNGAP1-219ENST00000637052 TTLL12Q14166 644 aaPredicted RBP9.42□□□□□ -0.9
SYNGAP1-219ENST00000637052 FBXO46Q6PJ61 603 aaPredicted RBP9.42□□□□□ -0.9
SYNGAP1-219ENST00000637052 PNNQ9H307 717 aaKnown RBP9.42□□□□□ -0.9
SYNGAP1-219ENST00000637052 PHAXQ9H814 394 aaKnown RBP9.42□□□□□ -0.9
SYNGAP1-219ENST00000637052 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.42□□□□□ -0.9
SYNGAP1-219ENST00000637052 TRIM35Q9UPQ4 493 aa9.42□□□□□ -0.9
SYNGAP1-219ENST00000637052 CENPFP49454 3210 aa9.42□□□□□ -0.9
SYNGAP1-219ENST00000637052 HTTP42858 3142 aa9.41□□□□□ -0.9
SYNGAP1-219ENST00000637052 PITPNM2Q9BZ72 1349 aa9.41□□□□□ -0.9
SYNGAP1-219ENST00000637052 ZNF646O15015 1829 aaPredicted RBP9.41□□□□□ -0.9
SYNGAP1-219ENST00000637052 POTEFA5A3E0 1075 aa9.41□□□□□ -0.9
SYNGAP1-219ENST00000637052 USP17L3A6NCW0 530 aa9.41□□□□□ -0.9
SYNGAP1-219ENST00000637052 USP17L4A6NCW7 530 aa9.41□□□□□ -0.9
SYNGAP1-219ENST00000637052 TRIM28Q13263 835 aaKnown RBP9.41□□□□□ -0.9
SYNGAP1-219ENST00000637052 USP17L1Q7RTZ2 530 aa9.41□□□□□ -0.9
SYNGAP1-219ENST00000637052 ZBTB38Q8NAP3 1195 aaPredicted RBP9.41□□□□□ -0.9
SYNGAP1-219ENST00000637052 MYD88Q99836 296 aa9.41□□□□□ -0.9
SYNGAP1-219ENST00000637052 WNT10BO00744 389 aa9.4□□□□□ -0.9
SYNGAP1-219ENST00000637052 FKTNO75072 461 aa9.4□□□□□ -0.9
SYNGAP1-219ENST00000637052 SASH1O94885 1247 aa9.4□□□□□ -0.9
SYNGAP1-219ENST00000637052 HABP4Q5JVS0 413 aaKnown RBP9.4□□□□□ -0.9
SYNGAP1-219ENST00000637052 RIC3Q7Z5B4 369 aa9.4□□□□□ -0.9
SYNGAP1-219ENST00000637052 TXNRD3Q86VQ6 643 aa9.4□□□□□ -0.9
SYNGAP1-219ENST00000637052 DBF4Q9UBU7 674 aaPredicted RBP9.4□□□□□ -0.9
SYNGAP1-219ENST00000637052 ZNF609O15014 1411 aa9.39□□□□□ -0.91
SYNGAP1-219ENST00000637052 KIAA0100Q14667 2235 aaKnown RBP9.39□□□□□ -0.91
SYNGAP1-219ENST00000637052 ATP2B4P23634 1241 aa9.39□□□□□ -0.91
SYNGAP1-219ENST00000637052 CAP1Q01518 475 aa9.39□□□□□ -0.91
SYNGAP1-219ENST00000637052 DACT2Q5SW24 774 aa9.39□□□□□ -0.91
SYNGAP1-219ENST00000637052 DUSP27Q5VZP5 1158 aa9.39□□□□□ -0.91
SYNGAP1-219ENST00000637052 PODNQ7Z5L7 613 aa9.39□□□□□ -0.91
SYNGAP1-219ENST00000637052 FBXW7Q969H0 707 aa9.39□□□□□ -0.91
SYNGAP1-219ENST00000637052 HYPKQ9NX55 129 aa9.39□□□□□ -0.91
SYNGAP1-219ENST00000637052 SPEF2Q9C093 1822 aa9.39□□□□□ -0.91
SYNGAP1-219ENST00000637052 XDHP47989 1333 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms