RNA–Protein interactions for RNA: ENST00000636905.1

SYNGAP1-218, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-218ENST00000636905 LAMA4Q16363 1823 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 A0A0G2JS52 829 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 SLC27A2O14975 620 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 KCNQ2O43526 872 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 TAF5LO75529 589 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 ZFYP08048 801 aaPredicted RBP6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 ITGA6P23229 1130 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 SSFA2P28290 1259 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 KRT32Q14532 448 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 TTC39AQ5SRH9 613 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 GORABQ5T7V8 394 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 VPS53Q5VIR6 699 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 SUSD4Q5VX71 490 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 CREB3L3Q68CJ9 461 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 PRPF40BQ6NWY9 871 aaKnown RBP6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 CERKQ8TCT0 537 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 XAGE2Q96GT9 111 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 DNAJC2Q99543 621 aaKnown RBP6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 GREM2Q9H772 168 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 FOXD4L1Q9NU39 408 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 LIMCH1Q9UPQ0 1083 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 CYP46A1Q9Y6A2 500 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 U3KPZ7 1027 aaPredicted RBP6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 UBN2Q6ZU65 1347 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 MROH5Q6ZUA9 1318 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 CNTNAP4Q9C0A0 1308 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 RTL9Q8NET4 1388 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 LRP5O75197 1615 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 SCN7AQ01118 1682 aa6.64□□□□□ -1.35
SYNGAP1-218ENST00000636905 RNF113AO15541 343 aaKnown RBP6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 ONECUT3O60422 494 aaPredicted RBP6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 PDE8BO95263 885 aa6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 UQCRFS1P1P0C7P4 283 aa6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 PDIA4P13667 645 aaKnown RBP6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 CASTP20810 708 aaKnown RBP6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 ANKRD1Q15327 319 aa6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 ATP2B3Q16720 1220 aa6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 RIC1Q4ADV7 1423 aa6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 METTL24Q5JXM2 366 aa6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 ZMYM1Q5SVZ6 1142 aa6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 RUFY3Q7L099 469 aa6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 SYNE4Q8N205 404 aa6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 EDC3Q96F86 508 aaKnown RBP6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 JAKMIP1Q96N16 626 aaKnown RBP6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 DSCC1Q9BVC3 393 aa6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 UPF3BQ9BZI7 483 aaKnown RBP6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 SH2B1Q9NRF2 756 aaPredicted RBP6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 CNNM1Q9NRU3 951 aa6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 PDRG1Q9NUG6 133 aa6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 MYO5AQ9Y4I1 1855 aaKnown RBP6.63□□□□□ -1.35
SYNGAP1-218ENST00000636905 TCHHQ07283 1943 aa6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 DOCK2Q92608 1830 aa6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 A0A1B0GUL6 1792 aa6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 RPAP1Q9BWH6 1393 aaPredicted RBP6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 GOLIM4O00461 696 aa6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 TRAK2O60296 914 aa6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 RPS6KA4O75676 772 aa6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 BAG4O95429 457 aaKnown RBP6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 NTSR2O95665 410 aa6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 AK2P54819 239 aa6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 TTF1Q15361 905 aaPredicted RBP6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 CCDC152Q4G0S7 254 aa6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 ZSCAN25Q6NSZ9 544 aa6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 BLOC1S2Q6QNY1 142 aa6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 DDX46Q7L014 1031 aaKnown RBP6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 ZNF589Q86UQ0 364 aaPredicted RBP6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 ZGPATQ8N5A5 531 aaKnown RBP6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 VGLL2Q8N8G2 317 aa6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 LINC00116Q8NCU8 138 aa6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 LPIN2Q92539 896 aa6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 GJD4Q96KN9 370 aaPredicted RBP6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 NIP7Q9Y221 180 aaKnown RBP eCLIP6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 COL24A1Q17RW2 1714 aa6.62□□□□□ -1.35
SYNGAP1-218ENST00000636905 ATRNO75882 1429 aa6.61□□□□□ -1.35
SYNGAP1-218ENST00000636905 BRD1O95696 1058 aa6.61□□□□□ -1.35
SYNGAP1-218ENST00000636905 HMGB1P09429 215 aaKnown RBP6.61□□□□□ -1.35
SYNGAP1-218ENST00000636905 FGFR2P21802 821 aa6.61□□□□□ -1.35
SYNGAP1-218ENST00000636905 RPS6KB1P23443 525 aa6.61□□□□□ -1.35
SYNGAP1-218ENST00000636905 HMGB2P26583 209 aaKnown RBP6.61□□□□□ -1.35
SYNGAP1-218ENST00000636905 ARID4AP29374 1257 aaPredicted RBP6.61□□□□□ -1.35
SYNGAP1-218ENST00000636905 IGHMBP2P38935 993 aaKnown RBP6.61□□□□□ -1.35
SYNGAP1-218ENST00000636905 SF3B3Q15393 1217 aaKnown RBP6.61□□□□□ -1.35
SYNGAP1-218ENST00000636905 PUM3Q15397 648 aaKnown RBP6.61□□□□□ -1.35
SYNGAP1-218ENST00000636905 ADCK5Q3MIX3 580 aa6.61□□□□□ -1.35
SYNGAP1-218ENST00000636905 SLC10A5Q5PT55 438 aa6.61□□□□□ -1.35
SYNGAP1-218ENST00000636905 MEX3CQ5U5Q3 659 aaKnown RBP6.61□□□□□ -1.35
SYNGAP1-218ENST00000636905 CCDC85AQ96PX6 553 aaPredicted RBP6.61□□□□□ -1.35
SYNGAP1-218ENST00000636905 MPHOSPH8Q99549 860 aa6.61□□□□□ -1.35
SYNGAP1-218ENST00000636905 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.61□□□□□ -1.35
SYNGAP1-218ENST00000636905 NYXQ9GZU5 481 aa6.61□□□□□ -1.35
SYNGAP1-218ENST00000636905 NARFQ9UHQ1 456 aa6.61□□□□□ -1.35
SYNGAP1-218ENST00000636905 TRPC5Q9UL62 973 aaPredicted RBP6.61□□□□□ -1.35
SYNGAP1-218ENST00000636905 AFF2P51816 1311 aa6.6□□□□□ -1.35
SYNGAP1-218ENST00000636905 WDR33Q9C0J8 1336 aaKnown RBP6.6□□□□□ -1.35
SYNGAP1-218ENST00000636905 SLC5A1P13866 664 aa6.6□□□□□ -1.35
SYNGAP1-218ENST00000636905 HCLS1P14317 486 aaPredicted RBP6.6□□□□□ -1.35
SYNGAP1-218ENST00000636905 ADORA1P30542 326 aa6.6□□□□□ -1.35
SYNGAP1-218ENST00000636905 FKBP4Q02790 459 aaKnown RBP eCLIP6.6□□□□□ -1.35
SYNGAP1-218ENST00000636905 NOL8Q76FK4 1167 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms