RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 CCDC191Q8NCU4 936 aa16.21■□□□□ 0.19
CTSD-208ENST00000636843 PHAXQ9H814 394 aaKnown RBP16.21■□□□□ 0.19
CTSD-208ENST00000636843 DBNDD1Q9H9R9 158 aa16.21■□□□□ 0.19
CTSD-208ENST00000636843 ELL2O00472 640 aaPredicted RBP16.2■□□□□ 0.18
CTSD-208ENST00000636843 RIMBP2O15034 1052 aa16.2■□□□□ 0.18
CTSD-208ENST00000636843 ZBTB12Q9Y330 459 aaPredicted RBP16.2■□□□□ 0.18
CTSD-208ENST00000636843 THSD7BQ9C0I4 1608 aa16.2■□□□□ 0.18
CTSD-208ENST00000636843 SHTN1A0MZ66 631 aa16.19■□□□□ 0.18
CTSD-208ENST00000636843 ECE2O60344 883 aa16.19■□□□□ 0.18
CTSD-208ENST00000636843 PCCAP05165 728 aaPredicted RBP16.19■□□□□ 0.18
CTSD-208ENST00000636843 CCDC152Q4G0S7 254 aa16.19■□□□□ 0.18
CTSD-208ENST00000636843 CCDC30Q5VVM6 783 aa16.19■□□□□ 0.18
CTSD-208ENST00000636843 TBC1D16Q8TBP0 767 aa16.19■□□□□ 0.18
CTSD-208ENST00000636843 MYD88Q99836 296 aa16.19■□□□□ 0.18
CTSD-208ENST00000636843 PODXL2Q9NZ53 605 aa16.19■□□□□ 0.18
CTSD-208ENST00000636843 PDE8AO60658 829 aa16.19■□□□□ 0.18
CTSD-208ENST00000636843 DDX58O95786 925 aaKnown RBP16.19■□□□□ 0.18
CTSD-208ENST00000636843 ZC3H12CQ9C0D7 883 aaKnown RBP16.19■□□□□ 0.18
CTSD-208ENST00000636843 CWC25Q9NXE8 425 aaPredicted RBP16.19■□□□□ 0.18
CTSD-208ENST00000636843 AOC2O75106 756 aa16.18■□□□□ 0.18
CTSD-208ENST00000636843 DOK7Q18PE1 504 aa16.18■□□□□ 0.18
CTSD-208ENST00000636843 SAMD7Q7Z3H4 446 aa16.18■□□□□ 0.18
CTSD-208ENST00000636843 USP48Q86UV5 1035 aa16.18■□□□□ 0.18
CTSD-208ENST00000636843 C8orf58Q8NAV2 365 aa16.18■□□□□ 0.18
CTSD-208ENST00000636843 METTL22Q9BUU2 404 aaPredicted RBP16.18■□□□□ 0.18
CTSD-208ENST00000636843 ZNF408Q9H9D4 720 aa16.18■□□□□ 0.18
CTSD-208ENST00000636843 SEC31BQ9NQW1 1179 aa16.18■□□□□ 0.18
CTSD-208ENST00000636843 CA12O43570 354 aa16.17■□□□□ 0.18
CTSD-208ENST00000636843 VIL1P09327 827 aaKnown RBP16.17■□□□□ 0.18
CTSD-208ENST00000636843 TBC1D10BQ4KMP7 808 aaPredicted RBP16.17■□□□□ 0.18
CTSD-208ENST00000636843 ANKIB1Q9P2G1 1089 aa16.17■□□□□ 0.18
CTSD-208ENST00000636843 GGA1Q9UJY5 639 aa16.17■□□□□ 0.18
CTSD-208ENST00000636843 G3V3G9 751 aa16.16■□□□□ 0.18
CTSD-208ENST00000636843 UFL1O94874 794 aa16.16■□□□□ 0.18
CTSD-208ENST00000636843 DCAF8Q5TAQ9 597 aa16.16■□□□□ 0.18
CTSD-208ENST00000636843 KCNQ5Q9NR82 932 aa16.16■□□□□ 0.18
CTSD-208ENST00000636843 RTL9Q8NET4 1388 aa16.16■□□□□ 0.18
CTSD-208ENST00000636843 BRPF1P55201 1214 aaPredicted RBP16.15■□□□□ 0.18
CTSD-208ENST00000636843 KRT26Q7Z3Y9 468 aa16.15■□□□□ 0.18
CTSD-208ENST00000636843 DCPSQ96C86 337 aaKnown RBP16.15■□□□□ 0.18
CTSD-208ENST00000636843 ABHD8Q96I13 439 aa16.15■□□□□ 0.18
CTSD-208ENST00000636843 COL4A1P02462 1669 aa16.15■□□□□ 0.18
CTSD-208ENST00000636843 ANKRD18AQ8IVF6 992 aa16.14■□□□□ 0.18
CTSD-208ENST00000636843 EGFRP00533 1210 aa16.14■□□□□ 0.17
CTSD-208ENST00000636843 HUNKP57058 714 aa16.14■□□□□ 0.17
CTSD-208ENST00000636843 NOGQ13253 232 aa16.14■□□□□ 0.17
CTSD-208ENST00000636843 RBM26Q5T8P6 1007 aaKnown RBP16.14■□□□□ 0.17
CTSD-208ENST00000636843 TSPYL6Q8N831 410 aa16.14■□□□□ 0.17
CTSD-208ENST00000636843 MAP3K2Q9Y2U5 619 aa16.14■□□□□ 0.17
CTSD-208ENST00000636843 XDHP47989 1333 aa16.13■□□□□ 0.17
CTSD-208ENST00000636843 KIF4BQ2VIQ3 1234 aa16.13■□□□□ 0.17
CTSD-208ENST00000636843 KSR2Q6VAB6 950 aa16.13■□□□□ 0.17
CTSD-208ENST00000636843 C2orf69Q8N8R5 385 aa16.13■□□□□ 0.17
CTSD-208ENST00000636843 AGBL3Q8NEM8 1001 aa16.13■□□□□ 0.17
CTSD-208ENST00000636843 JARID2Q92833 1246 aaPredicted RBP16.13■□□□□ 0.17
CTSD-208ENST00000636843 CDC5LQ99459 802 aaKnown RBP16.13■□□□□ 0.17
CTSD-208ENST00000636843 STK31Q9BXU1 1019 aa16.13■□□□□ 0.17
CTSD-208ENST00000636843 ATP2B4P23634 1241 aa16.12■□□□□ 0.17
CTSD-208ENST00000636843 CTSWP56202 376 aa16.12■□□□□ 0.17
CTSD-208ENST00000636843 CCDC85AQ96PX6 553 aaPredicted RBP16.12■□□□□ 0.17
CTSD-208ENST00000636843 GBA2Q9HCG7 927 aaPredicted RBP16.12■□□□□ 0.17
CTSD-208ENST00000636843 ZNF609O15014 1411 aa16.11■□□□□ 0.17
CTSD-208ENST00000636843 PI4KAP2A4QPH2 592 aa16.11■□□□□ 0.17
CTSD-208ENST00000636843 IGKV5-2P06315 115 aa16.11■□□□□ 0.17
CTSD-208ENST00000636843 ZNF280AP59817 542 aaPredicted RBP16.11■□□□□ 0.17
CTSD-208ENST00000636843 NEXNQ0ZGT2 675 aa16.11■□□□□ 0.17
CTSD-208ENST00000636843 CCDC27Q2M243 656 aa16.11■□□□□ 0.17
CTSD-208ENST00000636843 ERICH6BQ5W0A0 696 aa16.11■□□□□ 0.17
CTSD-208ENST00000636843 RSBN1LQ6PCB5 846 aaPredicted RBP16.11■□□□□ 0.17
CTSD-208ENST00000636843 SULF1Q8IWU6 871 aa16.11■□□□□ 0.17
CTSD-208ENST00000636843 PI4KAP1Q8N8J0 262 aa16.11■□□□□ 0.17
CTSD-208ENST00000636843 TSKSQ9UJT2 592 aa16.11■□□□□ 0.17
CTSD-208ENST00000636843 RGMBQ6NW40 437 aa16.1■□□□□ 0.17
CTSD-208ENST00000636843 DLK2Q6UY11 383 aa16.1■□□□□ 0.17
CTSD-208ENST00000636843 GGA3Q9NZ52 723 aa16.1■□□□□ 0.17
CTSD-208ENST00000636843 ADM5C9JUS6 153 aa16.09■□□□□ 0.17
CTSD-208ENST00000636843 PODNQ7Z5L7 613 aa16.09■□□□□ 0.17
CTSD-208ENST00000636843 TTLL11Q8NHH1 800 aa16.09■□□□□ 0.17
CTSD-208ENST00000636843 TSR2Q969E8 191 aaKnown RBP16.09■□□□□ 0.17
CTSD-208ENST00000636843 CCDC102AQ96A19 550 aa16.09■□□□□ 0.17
CTSD-208ENST00000636843 BSDC1Q9NW68 430 aaPredicted RBP16.09■□□□□ 0.17
CTSD-208ENST00000636843 NCBP3Q53F19 620 aaKnown RBP16.09■□□□□ 0.17
CTSD-208ENST00000636843 WWC1Q8IX03 1113 aa16.09■□□□□ 0.17
CTSD-208ENST00000636843 GMLQ99445 158 aa16.09■□□□□ 0.17
CTSD-208ENST00000636843 SCN9AQ15858 1988 aa16.08■□□□□ 0.17
CTSD-208ENST00000636843 IL16Q14005 1332 aa16.08■□□□□ 0.17
CTSD-208ENST00000636843 USP17L3A6NCW0 530 aa16.08■□□□□ 0.16
CTSD-208ENST00000636843 USP17L4A6NCW7 530 aa16.08■□□□□ 0.16
CTSD-208ENST00000636843 FAM155AB1AL88 458 aaPredicted RBP16.08■□□□□ 0.16
CTSD-208ENST00000636843 SCARF1Q14162 830 aa16.08■□□□□ 0.16
CTSD-208ENST00000636843 TWISTNBQ3B726 338 aaPredicted RBP16.08■□□□□ 0.16
CTSD-208ENST00000636843 USP17L1Q7RTZ2 530 aa16.08■□□□□ 0.16
CTSD-208ENST00000636843 ZIC5Q96T25 663 aa16.08■□□□□ 0.16
CTSD-208ENST00000636843 MINPP1Q9UNW1 487 aa16.08■□□□□ 0.16
CTSD-208ENST00000636843 NEURL1BA8MQ27 555 aa16.07■□□□□ 0.16
CTSD-208ENST00000636843 SLC4A2P04920 1241 aa16.07■□□□□ 0.16
CTSD-208ENST00000636843 USP17L8P0C7I0 530 aa16.07■□□□□ 0.16
CTSD-208ENST00000636843 ZNF157P51786 506 aaPredicted RBP16.07■□□□□ 0.16
CTSD-208ENST00000636843 GREM2Q9H772 168 aa16.07■□□□□ 0.16
CTSD-208ENST00000636843 POLR2AP24928 1970 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms