RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-238ENST00000635997 PRM3Q9NNZ6 103 aa16.73■□□□□ 0.27
NEDD4L-238ENST00000635997 TFCP2Q12800 502 aa16.72■□□□□ 0.27
NEDD4L-238ENST00000635997 CHST3Q7LGC8 479 aa16.72■□□□□ 0.27
NEDD4L-238ENST00000635997 IL17REQ8NFR9 667 aa16.72■□□□□ 0.27
NEDD4L-238ENST00000635997 PANK2Q9BZ23 570 aa16.72■□□□□ 0.27
NEDD4L-238ENST00000635997 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.72■□□□□ 0.279e-8■■□□□ 11.7
NEDD4L-238ENST00000635997 RNF181Q9P0P0 153 aa16.72■□□□□ 0.27
NEDD4L-238ENST00000635997 USP16Q9Y5T5 823 aa16.72■□□□□ 0.27
NEDD4L-238ENST00000635997 PALLDQ8WX93 1383 aa16.72■□□□□ 0.27
NEDD4L-238ENST00000635997 TSPY2A6NKD2 308 aa16.72■□□□□ 0.27
NEDD4L-238ENST00000635997 DTNBO60941 627 aa16.72■□□□□ 0.27
NEDD4L-238ENST00000635997 ERFEQ4G0M1 354 aa16.72■□□□□ 0.27
NEDD4L-238ENST00000635997 TTLL6Q8N841 843 aa16.72■□□□□ 0.27
NEDD4L-238ENST00000635997 HLA-DOAP06340 250 aa16.72■□□□□ 0.27
NEDD4L-238ENST00000635997 IL15P40933 162 aaPredicted RBP16.72■□□□□ 0.27
NEDD4L-238ENST00000635997 NDUFB9Q9Y6M9 179 aa16.72■□□□□ 0.27
NEDD4L-238ENST00000635997 IBSPP21815 317 aaPredicted RBP16.71■□□□□ 0.27
NEDD4L-238ENST00000635997 ZNF76P36508 570 aa16.71■□□□□ 0.27
NEDD4L-238ENST00000635997 SULF1Q8IWU6 871 aa16.71■□□□□ 0.27
NEDD4L-238ENST00000635997 MIGA1Q8NAN2 632 aa16.71■□□□□ 0.27
NEDD4L-238ENST00000635997 ANKRD2Q9GZV1 360 aa16.71■□□□□ 0.27
NEDD4L-238ENST00000635997 DCTPP1Q9H773 170 aa16.71■□□□□ 0.27
NEDD4L-238ENST00000635997 RRAGDQ9NQL2 400 aaPredicted RBP16.71■□□□□ 0.27
NEDD4L-238ENST00000635997 CEP170BQ9Y4F5 1589 aaPredicted RBP16.71■□□□□ 0.27
NEDD4L-238ENST00000635997 EIF2AK4Q9P2K8 1649 aaKnown RBP16.71■□□□□ 0.27
NEDD4L-238ENST00000635997 ZBTB7BO15156 539 aaPredicted RBP16.71■□□□□ 0.27
NEDD4L-238ENST00000635997 CFAP45Q9UL16 551 aa16.71■□□□□ 0.27
NEDD4L-238ENST00000635997 NEK1Q96PY6 1258 aa16.71■□□□□ 0.26
NEDD4L-238ENST00000635997 ZNF287Q9HBT7 754 aa16.71■□□□□ 0.26
NEDD4L-238ENST00000635997 NOL7Q9UMY1 257 aaKnown RBP16.71■□□□□ 0.26
NEDD4L-238ENST00000635997 ANKARQ7Z5J8 1434 aa16.71■□□□□ 0.26
NEDD4L-238ENST00000635997 TMEM67Q5HYA8 995 aa16.7■□□□□ 0.26
NEDD4L-238ENST00000635997 SYCE3A1L190 88 aa16.7■□□□□ 0.26
NEDD4L-238ENST00000635997 GOLGA8AA7E2F4 631 aa16.7■□□□□ 0.26
NEDD4L-238ENST00000635997 USP19O94966 1318 aa16.7■□□□□ 0.26
NEDD4L-238ENST00000635997 SOS2Q07890 1332 aaPredicted RBP16.69■□□□□ 0.26
NEDD4L-238ENST00000635997 SBNO2Q9Y2G9 1366 aa16.69■□□□□ 0.26
NEDD4L-238ENST00000635997 SEC24BO95487 1268 aa16.69■□□□□ 0.26
NEDD4L-238ENST00000635997 SERPINC1P01008 464 aa16.69■□□□□ 0.26
NEDD4L-238ENST00000635997 PRDM10Q9NQV6 1147 aa16.69■□□□□ 0.26
NEDD4L-238ENST00000635997 RBM8AQ9Y5S9 174 aaKnown RBP16.69■□□□□ 0.26
NEDD4L-238ENST00000635997 CCDC192P0DO97 292 aa16.69■□□□□ 0.26
NEDD4L-238ENST00000635997 PIGBQ92521 554 aa16.69■□□□□ 0.26
NEDD4L-238ENST00000635997 CLTCQ00610 1675 aaKnown RBP16.69■□□□□ 0.26
NEDD4L-238ENST00000635997 FILIP1Q7Z7B0 1213 aa16.69■□□□□ 0.26
NEDD4L-238ENST00000635997 DCPSQ96C86 337 aaKnown RBP16.69■□□□□ 0.26
NEDD4L-238ENST00000635997 GRPEL1Q9HAV7 217 aa16.68■□□□□ 0.26
NEDD4L-238ENST00000635997 ZBTB1Q9Y2K1 713 aa16.68■□□□□ 0.26
NEDD4L-238ENST00000635997 INSRP06213 1382 aa16.68■□□□□ 0.26
NEDD4L-238ENST00000635997 PICALMQ13492 652 aa16.68■□□□□ 0.26
NEDD4L-238ENST00000635997 MFSD6Q6ZSS7 791 aa16.68■□□□□ 0.26
NEDD4L-238ENST00000635997 ZFYVE9O95405 1425 aa16.68■□□□□ 0.26
NEDD4L-238ENST00000635997 USP6P35125 1406 aa16.68■□□□□ 0.26
NEDD4L-238ENST00000635997 ZFYVE27Q5T4F4 411 aa16.68■□□□□ 0.26
NEDD4L-238ENST00000635997 TBC1D32Q96NH3 1257 aa16.68■□□□□ 0.26
NEDD4L-238ENST00000635997 CIZ1Q9ULV3 898 aaPredicted RBP16.68■□□□□ 0.26
NEDD4L-238ENST00000635997 AXIN2Q9Y2T1 843 aa16.68■□□□□ 0.26
NEDD4L-238ENST00000635997 SPATA31A1Q5TZJ5 1347 aa16.67■□□□□ 0.26
NEDD4L-238ENST00000635997 PNMA6EA0A0J9YXQ4 647 aa16.67■□□□□ 0.26
NEDD4L-238ENST00000635997 TTF1Q15361 905 aaPredicted RBP16.67■□□□□ 0.26
NEDD4L-238ENST00000635997 POTEAQ6S8J7 498 aa16.67■□□□□ 0.26
NEDD4L-238ENST00000635997 VTI1AQ96AJ9 217 aa16.67■□□□□ 0.26
NEDD4L-238ENST00000635997 NUP62CLQ9H1M0 184 aa16.67■□□□□ 0.26
NEDD4L-238ENST00000635997 ORC3Q9UBD5 711 aaPredicted RBP16.67■□□□□ 0.26
NEDD4L-238ENST00000635997 SRP68Q9UHB9 627 aaKnown RBP16.67■□□□□ 0.26
NEDD4L-238ENST00000635997 ESYT1Q9BSJ8 1104 aa16.67■□□□□ 0.26
NEDD4L-238ENST00000635997 RNF41Q9H4P4 317 aaPredicted RBP16.67■□□□□ 0.26
NEDD4L-238ENST00000635997 SLC4A4Q9Y6R1 1079 aa16.67■□□□□ 0.26
NEDD4L-238ENST00000635997 CPA1P15085 419 aa16.66■□□□□ 0.26
NEDD4L-238ENST00000635997 NMIQ13287 307 aaPredicted RBP16.66■□□□□ 0.26
NEDD4L-238ENST00000635997 CT47A1Q5JQC4 288 aaPredicted RBP16.66■□□□□ 0.26
NEDD4L-238ENST00000635997 KLHL10Q6JEL2 608 aa16.66■□□□□ 0.26
NEDD4L-238ENST00000635997 SEC63Q9UGP8 760 aaKnown RBP16.66■□□□□ 0.26
NEDD4L-238ENST00000635997 GJB2P29033 226 aa16.66■□□□□ 0.26
NEDD4L-238ENST00000635997 NAA16Q6N069 864 aaPredicted RBP16.66■□□□□ 0.26
NEDD4L-238ENST00000635997 PLEKHM2Q8IWE5 1019 aa16.66■□□□□ 0.26
NEDD4L-238ENST00000635997 CKAP2LQ8IYA6 745 aa16.66■□□□□ 0.26
NEDD4L-238ENST00000635997 TNPO1Q92973 898 aaKnown RBP16.66■□□□□ 0.26
NEDD4L-238ENST00000635997 UQCRFS1P1P0C7P4 283 aa16.66■□□□□ 0.26
NEDD4L-238ENST00000635997 SMC5Q8IY18 1101 aa16.66■□□□□ 0.26
NEDD4L-238ENST00000635997 CCDC196A0A1B0GTZ2 297 aa16.65■□□□□ 0.26
NEDD4L-238ENST00000635997 TAF5LO75529 589 aa16.65■□□□□ 0.26
NEDD4L-238ENST00000635997 YY1P25490 414 aa16.65■□□□□ 0.26
NEDD4L-238ENST00000635997 ZGPATQ8N5A5 531 aaKnown RBP16.65■□□□□ 0.26
NEDD4L-238ENST00000635997 MAP7D2Q96T17 732 aa16.65■□□□□ 0.26
NEDD4L-238ENST00000635997 DBNDD2Q9BQY9 259 aa16.65■□□□□ 0.26
NEDD4L-238ENST00000635997 KLF18A0A0U1RQI7 1052 aa16.65■□□□□ 0.26
NEDD4L-238ENST00000635997 SLC15A2Q16348 729 aa16.65■□□□□ 0.26
NEDD4L-238ENST00000635997 CCDC93Q567U6 631 aa16.65■□□□□ 0.26
NEDD4L-238ENST00000635997 PAG1Q9NWQ8 432 aa16.65■□□□□ 0.26
NEDD4L-238ENST00000635997 IARSP41252 1262 aaKnown RBP16.65■□□□□ 0.26
NEDD4L-238ENST00000635997 SLC16A10Q8TF71 515 aa16.65■□□□□ 0.26
NEDD4L-238ENST00000635997 PDCL3Q9H2J4 239 aa16.65■□□□□ 0.26
NEDD4L-238ENST00000635997 SH2B1Q9NRF2 756 aaPredicted RBP16.65■□□□□ 0.26
NEDD4L-238ENST00000635997 ZHX1Q9UKY1 873 aaPredicted RBP16.65■□□□□ 0.26
NEDD4L-238ENST00000635997 BCORL1Q5H9F3 1711 aa16.65■□□□□ 0.26
NEDD4L-238ENST00000635997 SPATA31A5Q5VU36 1347 aa16.65■□□□□ 0.26
NEDD4L-238ENST00000635997 SPATA31A7Q8IWB4 1347 aa16.65■□□□□ 0.26
NEDD4L-238ENST00000635997 EIF4A1P60842 406 aaKnown RBP16.65■□□□□ 0.26
NEDD4L-238ENST00000635997 TANGO6Q9C0B7 1094 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms