RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 AFMP43652 599 aa13.31□□□□□ -0.28
COL11A1-211ENST00000635193 ZNF526Q8TF50 670 aaPredicted RBP13.31□□□□□ -0.28
COL11A1-211ENST00000635193 PPM1EQ8WY54 764 aa13.31□□□□□ -0.28
COL11A1-211ENST00000635193 NUP160Q12769 1436 aa13.31□□□□□ -0.28
COL11A1-211ENST00000635193 FSD2A1L4K1 749 aa13.31□□□□□ -0.28
COL11A1-211ENST00000635193 ANKRD18BA2A2Z9 1011 aa13.31□□□□□ -0.28
COL11A1-211ENST00000635193 ZEB2O60315 1214 aa13.31□□□□□ -0.28
COL11A1-211ENST00000635193 IDEP14735 1019 aa13.31□□□□□ -0.28
COL11A1-211ENST00000635193 MARCKSP29966 332 aaPredicted RBP13.31□□□□□ -0.28
COL11A1-211ENST00000635193 KIF5BP33176 963 aa13.31□□□□□ -0.28
COL11A1-211ENST00000635193 SPAG1Q07617 926 aa13.31□□□□□ -0.28
COL11A1-211ENST00000635193 MFSD6Q6ZSS7 791 aa13.31□□□□□ -0.28
COL11A1-211ENST00000635193 UBE3BQ7Z3V4 1068 aa13.31□□□□□ -0.28
COL11A1-211ENST00000635193 ZSCAN29Q8IWY8 852 aaPredicted RBP13.31□□□□□ -0.28
COL11A1-211ENST00000635193 CTNNBL1Q8WYA6 563 aaPredicted RBP13.31□□□□□ -0.28
COL11A1-211ENST00000635193 MYO1BO43795 1136 aa13.3□□□□□ -0.28
COL11A1-211ENST00000635193 RBM5P52756 815 aaKnown RBP eCLIP13.3□□□□□ -0.28
COL11A1-211ENST00000635193 SPTLC2O15270 562 aa13.3□□□□□ -0.28
COL11A1-211ENST00000635193 FBLN1P23142 703 aa13.3□□□□□ -0.28
COL11A1-211ENST00000635193 ZNF445P59923 1031 aa13.3□□□□□ -0.28
COL11A1-211ENST00000635193 PRPF4BQ13523 1007 aaKnown RBP13.3□□□□□ -0.28
COL11A1-211ENST00000635193 CCDC96Q2M329 555 aa13.3□□□□□ -0.28
COL11A1-211ENST00000635193 HOOK3Q86VS8 718 aa13.3□□□□□ -0.28
COL11A1-211ENST00000635193 IFNKQ9P0W0 207 aa13.3□□□□□ -0.28
COL11A1-211ENST00000635193 MCMDC2Q4G0Z9 681 aa13.3□□□□□ -0.28
COL11A1-211ENST00000635193 VAMP4O75379 141 aa13.3□□□□□ -0.28
COL11A1-211ENST00000635193 DESP17661 470 aa13.3□□□□□ -0.28
COL11A1-211ENST00000635193 EVCP57679 992 aa13.3□□□□□ -0.28
COL11A1-211ENST00000635193 NMIQ13287 307 aaPredicted RBP13.3□□□□□ -0.28
COL11A1-211ENST00000635193 ZNF444Q8N0Y2 327 aaPredicted RBP13.3□□□□□ -0.28
COL11A1-211ENST00000635193 GRIN2AQ12879 1464 aa13.29□□□□□ -0.28
COL11A1-211ENST00000635193 ANXA1P04083 346 aa13.29□□□□□ -0.28
COL11A1-211ENST00000635193 ARFGAP2Q8N6H7 521 aa13.29□□□□□ -0.28
COL11A1-211ENST00000635193 PUF60Q9UHX1 559 aaKnown RBP13.29□□□□□ -0.28
COL11A1-211ENST00000635193 CLGNO14967 610 aa13.29□□□□□ -0.28
COL11A1-211ENST00000635193 CHMLP26374 656 aa13.29□□□□□ -0.28
COL11A1-211ENST00000635193 ZBTB43O43298 467 aa13.29□□□□□ -0.28
COL11A1-211ENST00000635193 RHOXF2BP0C7M4 288 aa13.29□□□□□ -0.28
COL11A1-211ENST00000635193 RHOXF2Q9BQY4 288 aa13.29□□□□□ -0.28
COL11A1-211ENST00000635193 ATP5J2-PTCD1G3V325 749 aa13.29□□□□□ -0.28
COL11A1-211ENST00000635193 MPHOSPH10O00566 681 aaKnown RBP13.29□□□□□ -0.28
COL11A1-211ENST00000635193 KIF4AO95239 1232 aa13.29□□□□□ -0.28
COL11A1-211ENST00000635193 BICDL1Q6ZP65 573 aa13.29□□□□□ -0.28
COL11A1-211ENST00000635193 CCDC129Q6ZRS4 1044 aa13.29□□□□□ -0.28
COL11A1-211ENST00000635193 TTC41PQ6P2S7 1318 aa13.29□□□□□ -0.28
COL11A1-211ENST00000635193 TRMT112Q9UI30 125 aaKnown RBP13.28□□□□□ -0.28
COL11A1-211ENST00000635193 CCDC160A6NGH7 325 aa13.28□□□□□ -0.28
COL11A1-211ENST00000635193 DNAJC21Q5F1R6 531 aaKnown RBP13.28□□□□□ -0.28
COL11A1-211ENST00000635193 TCERG1LQ5VWI1 586 aa13.28□□□□□ -0.28
COL11A1-211ENST00000635193 AEBP2Q6ZN18 517 aaPredicted RBP13.28□□□□□ -0.28
COL11A1-211ENST00000635193 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.28□□□□□ -0.28
COL11A1-211ENST00000635193 POTEDQ86YR6 584 aa13.28□□□□□ -0.28
COL11A1-211ENST00000635193 ZBTB9Q96C00 473 aa13.28□□□□□ -0.28
COL11A1-211ENST00000635193 BMP15O95972 392 aa13.28□□□□□ -0.28
COL11A1-211ENST00000635193 PPP2R3AQ06190 1150 aa13.28□□□□□ -0.28
COL11A1-211ENST00000635193 IDI1Q13907 227 aa13.28□□□□□ -0.28
COL11A1-211ENST00000635193 KARSQ15046 597 aaKnown RBP13.28□□□□□ -0.28
COL11A1-211ENST00000635193 RUFY3Q7L099 469 aa13.28□□□□□ -0.28
COL11A1-211ENST00000635193 CPLX4Q7Z7G2 160 aa13.28□□□□□ -0.28
COL11A1-211ENST00000635193 DAAM2Q86T65 1068 aa13.28□□□□□ -0.28
COL11A1-211ENST00000635193 DZIP1Q86YF9 867 aaKnown RBP13.28□□□□□ -0.28
COL11A1-211ENST00000635193 TSPYL6Q8N831 410 aa13.28□□□□□ -0.28
COL11A1-211ENST00000635193 ANKRD24Q8TF21 1146 aa13.28□□□□□ -0.28
COL11A1-211ENST00000635193 IFI16Q16666 785 aaKnown RBP13.28□□□□□ -0.28
COL11A1-211ENST00000635193 CREB3L3Q68CJ9 461 aa13.28□□□□□ -0.28
COL11A1-211ENST00000635193 EXOC1Q9NV70 894 aa13.28□□□□□ -0.28
COL11A1-211ENST00000635193 CWC25Q9NXE8 425 aaPredicted RBP13.28□□□□□ -0.28
COL11A1-211ENST00000635193 CHPF2Q9P2E5 772 aa13.28□□□□□ -0.28
COL11A1-211ENST00000635193 RNF123Q5XPI4 1314 aa13.28□□□□□ -0.28
COL11A1-211ENST00000635193 MACROD2A1Z1Q3 448 aa13.27□□□□□ -0.28
COL11A1-211ENST00000635193 PAXIP1Q6ZW49 1069 aaPredicted RBP13.27□□□□□ -0.28
COL11A1-211ENST00000635193 B4GALNT4Q76KP1 1039 aa13.27□□□□□ -0.28
COL11A1-211ENST00000635193 PAF1Q8N7H5 531 aa13.27□□□□□ -0.28
COL11A1-211ENST00000635193 AFAP1L1Q8TED9 768 aa13.27□□□□□ -0.28
COL11A1-211ENST00000635193 ZBTB3Q9H5J0 574 aa13.27□□□□□ -0.28
COL11A1-211ENST00000635193 TMOD3Q9NYL9 352 aa13.27□□□□□ -0.28
COL11A1-211ENST00000635193 THOC2Q8NI27 1593 aaKnown RBP13.27□□□□□ -0.28
COL11A1-211ENST00000635193 UGGT2Q9NYU1 1516 aa13.27□□□□□ -0.28
COL11A1-211ENST00000635193 CLNS1AP54105 237 aaKnown RBP13.27□□□□□ -0.28
COL11A1-211ENST00000635193 TESK2Q96S53 571 aa13.27□□□□□ -0.28
COL11A1-211ENST00000635193 LZTFL1Q9NQ48 299 aa13.27□□□□□ -0.29
COL11A1-211ENST00000635193 TACC1O75410 805 aa13.27□□□□□ -0.29
COL11A1-211ENST00000635193 INPP5BP32019 993 aa13.27□□□□□ -0.29
COL11A1-211ENST00000635193 KIAA0753Q2KHM9 967 aa13.27□□□□□ -0.29
COL11A1-211ENST00000635193 LDHAL6AQ6ZMR3 332 aa13.27□□□□□ -0.29
COL11A1-211ENST00000635193 ANKLE2Q86XL3 938 aa13.27□□□□□ -0.29
COL11A1-211ENST00000635193 WDR66Q8TBY9 1149 aa13.27□□□□□ -0.29
COL11A1-211ENST00000635193 ZFYP08048 801 aaPredicted RBP13.26□□□□□ -0.29
COL11A1-211ENST00000635193 WTAPQ15007 396 aa13.26□□□□□ -0.29
COL11A1-211ENST00000635193 ELF2Q15723 593 aa13.26□□□□□ -0.29
COL11A1-211ENST00000635193 JARID2Q92833 1246 aaPredicted RBP13.26□□□□□ -0.29
COL11A1-211ENST00000635193 ADGRL1O94910 1474 aa13.26□□□□□ -0.29
COL11A1-211ENST00000635193 A0A1W2PRG0 241 aa13.26□□□□□ -0.29
COL11A1-211ENST00000635193 ZNF569Q5MCW4 686 aa13.26□□□□□ -0.29
COL11A1-211ENST00000635193 UTP14AQ9BVJ6 771 aaKnown RBP13.26□□□□□ -0.29
COL11A1-211ENST00000635193 KRT83P78385 493 aa13.26□□□□□ -0.29
COL11A1-211ENST00000635193 STMN4Q9H169 189 aaPredicted RBP13.26□□□□□ -0.29
COL11A1-211ENST00000635193 ZBTB7BO15156 539 aaPredicted RBP13.26□□□□□ -0.29
COL11A1-211ENST00000635193 KRT86O43790 486 aa13.26□□□□□ -0.29
COL11A1-211ENST00000635193 ALDH1L1O75891 902 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms