RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	CXCL9	Q07325	125 aa		13.39	□□□□□ -0.27
UBE3A-223	ENST00000631247	KIAA2012	Q0VF49	1180 aa		13.39	□□□□□ -0.27
UBE3A-223	ENST00000631247	TNIP1	Q15025	636 aa		13.39	□□□□□ -0.27
UBE3A-223	ENST00000631247	CIAPIN1	Q6FI81	312 aa		13.39	□□□□□ -0.27
UBE3A-223	ENST00000631247	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.39	□□□□□ -0.27
UBE3A-223	ENST00000631247	IFNLR1	Q8IU57	520 aa	Predicted RBP	13.39	□□□□□ -0.27
UBE3A-223	ENST00000631247	CHMP4A	Q9BY43	222 aa		13.39	□□□□□ -0.27
UBE3A-223	ENST00000631247	GPRC5D	Q9NZD1	345 aa		13.39	□□□□□ -0.27
UBE3A-223	ENST00000631247	DUOX1	Q9NRD9	1551 aa		13.39	□□□□□ -0.27
UBE3A-223	ENST00000631247	TRPM7	Q96QT4	1865 aa		13.39	□□□□□ -0.27
UBE3A-223	ENST00000631247	CDHR2	Q9BYE9	1310 aa		13.39	□□□□□ -0.27
UBE3A-223	ENST00000631247	ELL2	O00472	640 aa	Predicted RBP	13.38	□□□□□ -0.27
UBE3A-223	ENST00000631247	IRS4	O14654	1257 aa	Predicted RBP	13.38	□□□□□ -0.27
UBE3A-223	ENST00000631247	RAD17	O75943	681 aa		13.38	□□□□□ -0.27
UBE3A-223	ENST00000631247	GMPS	P49915	693 aa	Predicted RBP	13.38	□□□□□ -0.27
UBE3A-223	ENST00000631247	DEFB115	Q30KQ5	88 aa		13.38	□□□□□ -0.27
UBE3A-223	ENST00000631247	OTUD5	Q96G74	571 aa		13.38	□□□□□ -0.27
UBE3A-223	ENST00000631247	RASSF10	A6NK89	507 aa		13.37	□□□□□ -0.27
UBE3A-223	ENST00000631247	C6orf229	H3BNL8	230 aa		13.37	□□□□□ -0.27
UBE3A-223	ENST00000631247	DDX58	O95786	925 aa	Known RBP	13.37	□□□□□ -0.27
UBE3A-223	ENST00000631247	WASHC4	Q2M389	1173 aa		13.37	□□□□□ -0.27
UBE3A-223	ENST00000631247	DCAF8	Q5TAQ9	597 aa		13.37	□□□□□ -0.27
UBE3A-223	ENST00000631247	NSFL1C	Q9UNZ2	370 aa	Known RBP	13.37	□□□□□ -0.27
UBE3A-223	ENST00000631247	FOXN1	O15353	648 aa		13.36	□□□□□ -0.27
UBE3A-223	ENST00000631247	ZNF853	P0CG23	659 aa		13.36	□□□□□ -0.27
UBE3A-223	ENST00000631247	GRM1	Q13255	1194 aa		13.36	□□□□□ -0.27
UBE3A-223	ENST00000631247	TRIM28	Q13263	835 aa	Known RBP	13.36	□□□□□ -0.27
UBE3A-223	ENST00000631247	SF3B3	Q15393	1217 aa	Known RBP	13.36	□□□□□ -0.27
UBE3A-223	ENST00000631247	CCDC30	Q5VVM6	783 aa		13.36	□□□□□ -0.27
UBE3A-223	ENST00000631247	CELF1	Q92879	486 aa	Known RBP	13.36	□□□□□ -0.27
UBE3A-223	ENST00000631247	MYD88	Q99836	296 aa		13.36	□□□□□ -0.27
UBE3A-223	ENST00000631247	PHAX	Q9H814	394 aa	Known RBP	13.36	□□□□□ -0.27
UBE3A-223	ENST00000631247	TRAF5	O00463	557 aa		13.35	□□□□□ -0.27
UBE3A-223	ENST00000631247	RIMBP2	O15034	1052 aa		13.35	□□□□□ -0.27
UBE3A-223	ENST00000631247	ECE1	P42892	770 aa		13.35	□□□□□ -0.27
UBE3A-223	ENST00000631247	CTCF	P49711	727 aa	Predicted RBP	13.35	□□□□□ -0.27
UBE3A-223	ENST00000631247	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.35	□□□□□ -0.27
UBE3A-223	ENST00000631247	EYA3	Q99504	573 aa		13.35	□□□□□ -0.27
UBE3A-223	ENST00000631247	WDR33	Q9C0J8	1336 aa	Known RBP	13.35	□□□□□ -0.27
UBE3A-223	ENST00000631247		G3V3G9	751 aa		13.34	□□□□□ -0.27
UBE3A-223	ENST00000631247		H7C1D1	291 aa		13.34	□□□□□ -0.27
UBE3A-223	ENST00000631247	MAP2K1	Q02750	393 aa	Predicted RBP	13.34	□□□□□ -0.27
UBE3A-223	ENST00000631247	CCDC152	Q4G0S7	254 aa		13.34	□□□□□ -0.27
UBE3A-223	ENST00000631247	C8orf58	Q8NAV2	365 aa		13.34	□□□□□ -0.27
UBE3A-223	ENST00000631247	CCDC191	Q8NCU4	936 aa		13.34	□□□□□ -0.27
UBE3A-223	ENST00000631247	STK31	Q9BXU1	1019 aa		13.34	□□□□□ -0.27
UBE3A-223	ENST00000631247	DBNDD1	Q9H9R9	158 aa		13.34	□□□□□ -0.27
UBE3A-223	ENST00000631247	CWC25	Q9NXE8	425 aa	Predicted RBP	13.34	□□□□□ -0.27
UBE3A-223	ENST00000631247	THSD7B	Q9C0I4	1608 aa		13.33	□□□□□ -0.28
UBE3A-223	ENST00000631247	RPS8	P62241	208 aa	Known RBP	13.33	□□□□□ -0.28
UBE3A-223	ENST00000631247	GPSM2	P81274	684 aa		13.33	□□□□□ -0.28
UBE3A-223	ENST00000631247	FMR1	Q06787	632 aa	Known RBP eCLIP	13.33	□□□□□ -0.28	8e-6	■■□□□ 11.8
UBE3A-223	ENST00000631247	CAPNS2	Q96L46	248 aa		13.33	□□□□□ -0.28
UBE3A-223	ENST00000631247	BEGAIN	Q9BUH8	593 aa		13.33	□□□□□ -0.28
UBE3A-223	ENST00000631247	ZNF408	Q9H9D4	720 aa		13.33	□□□□□ -0.28
UBE3A-223	ENST00000631247	ANKIB1	Q9P2G1	1089 aa		13.33	□□□□□ -0.28
UBE3A-223	ENST00000631247	CNOT7	Q9UIV1	285 aa	Known RBP	13.33	□□□□□ -0.28
UBE3A-223	ENST00000631247	COL4A1	P02462	1669 aa		13.33	□□□□□ -0.28
UBE3A-223	ENST00000631247	TTLL13P	A6NNM8	815 aa		13.32	□□□□□ -0.28
UBE3A-223	ENST00000631247	YDJC	A8MPS7	323 aa		13.32	□□□□□ -0.28
UBE3A-223	ENST00000631247	ECE2	O60344	883 aa		13.32	□□□□□ -0.28
UBE3A-223	ENST00000631247	CELF2	O95319	508 aa	Known RBP	13.32	□□□□□ -0.28
UBE3A-223	ENST00000631247	PCCA	P05165	728 aa	Predicted RBP	13.32	□□□□□ -0.28
UBE3A-223	ENST00000631247	NEXN	Q0ZGT2	675 aa		13.32	□□□□□ -0.28
UBE3A-223	ENST00000631247	MICALL2	Q8IY33	904 aa		13.32	□□□□□ -0.28
UBE3A-223	ENST00000631247	TRPM4	Q8TD43	1214 aa		13.32	□□□□□ -0.28
UBE3A-223	ENST00000631247	ZC3H15	Q8WU90	426 aa	Known RBP	13.32	□□□□□ -0.28
UBE3A-223	ENST00000631247	TSR2	Q969E8	191 aa	Known RBP	13.32	□□□□□ -0.28
UBE3A-223	ENST00000631247	GLIS2	Q9BZE0	524 aa	Predicted RBP	13.32	□□□□□ -0.28
UBE3A-223	ENST00000631247	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.32	□□□□□ -0.28
UBE3A-223	ENST00000631247	PRDM10	Q9NQV6	1147 aa		13.32	□□□□□ -0.28
UBE3A-223	ENST00000631247	WBP1L	Q9NX94	342 aa		13.32	□□□□□ -0.28
UBE3A-223	ENST00000631247	PDE8A	O60658	829 aa		13.31	□□□□□ -0.28
UBE3A-223	ENST00000631247	UFL1	O94874	794 aa		13.31	□□□□□ -0.28
UBE3A-223	ENST00000631247	DOK7	Q18PE1	504 aa		13.31	□□□□□ -0.28
UBE3A-223	ENST00000631247	CYP4F22	Q6NT55	531 aa		13.31	□□□□□ -0.28
UBE3A-223	ENST00000631247	IFNL1	Q8IU54	200 aa		13.31	□□□□□ -0.28
UBE3A-223	ENST00000631247	TBC1D16	Q8TBP0	767 aa		13.31	□□□□□ -0.28
UBE3A-223	ENST00000631247	GPR101	Q96P66	508 aa	Predicted RBP	13.31	□□□□□ -0.28
UBE3A-223	ENST00000631247	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.31	□□□□□ -0.28
UBE3A-223	ENST00000631247	METTL22	Q9BUU2	404 aa	Predicted RBP	13.31	□□□□□ -0.28
UBE3A-223	ENST00000631247	POLL	Q9UGP5	575 aa		13.31	□□□□□ -0.28
UBE3A-223	ENST00000631247	MAP3K2	Q9Y2U5	619 aa		13.31	□□□□□ -0.28
UBE3A-223	ENST00000631247	TLL2	Q9Y6L7	1015 aa		13.31	□□□□□ -0.28
UBE3A-223	ENST00000631247	SPEF2	Q9C093	1822 aa		13.31	□□□□□ -0.28
UBE3A-223	ENST00000631247	MYH3	P11055	1940 aa		13.31	□□□□□ -0.28
UBE3A-223	ENST00000631247	PSMD14	O00487	310 aa		13.3	□□□□□ -0.28
UBE3A-223	ENST00000631247	LBX1	P52954	281 aa		13.3	□□□□□ -0.28
UBE3A-223	ENST00000631247	CST9	Q5W186	159 aa		13.3	□□□□□ -0.28
UBE3A-223	ENST00000631247	CDC37L1	Q7L3B6	337 aa		13.3	□□□□□ -0.28
UBE3A-223	ENST00000631247	ANKRD18A	Q8IVF6	992 aa		13.3	□□□□□ -0.28
UBE3A-223	ENST00000631247	JARID2	Q92833	1246 aa	Predicted RBP	13.3	□□□□□ -0.28
UBE3A-223	ENST00000631247	SEC31B	Q9NQW1	1179 aa		13.3	□□□□□ -0.28
UBE3A-223	ENST00000631247	GGA1	Q9UJY5	639 aa		13.3	□□□□□ -0.28
UBE3A-223	ENST00000631247	SHTN1	A0MZ66	631 aa		13.29	□□□□□ -0.28
UBE3A-223	ENST00000631247	PI4KAP2	A4QPH2	592 aa		13.29	□□□□□ -0.28
UBE3A-223	ENST00000631247	RPS12	P25398	132 aa	Known RBP	13.29	□□□□□ -0.28
UBE3A-223	ENST00000631247	TWISTNB	Q3B726	338 aa	Predicted RBP	13.29	□□□□□ -0.28
UBE3A-223	ENST00000631247	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.29	□□□□□ -0.28
UBE3A-223	ENST00000631247	TSPYL6	Q8N831	410 aa		13.29	□□□□□ -0.28

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