RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 NIM1KQ8IY84 436 aa23.44■■□□□ 1.34
PNKP-224ENST00000631020 MEIS3Q99687 375 aa23.44■■□□□ 1.34
PNKP-224ENST00000631020 LDHDQ86WU2 507 aa23.43■■□□□ 1.34
PNKP-224ENST00000631020 ADAMTSL1Q8N6G6 1762 aa23.43■■□□□ 1.34
PNKP-224ENST00000631020 ZBTB7BO15156 539 aaPredicted RBP23.43■■□□□ 1.34
PNKP-224ENST00000631020 MVPQ14764 893 aaKnown RBP23.43■■□□□ 1.34
PNKP-224ENST00000631020 PNMA8AQ86V59 439 aaPredicted RBP23.43■■□□□ 1.34
PNKP-224ENST00000631020 DUOX1Q9NRD9 1551 aa23.42■■□□□ 1.34
PNKP-224ENST00000631020 KIAA2012Q0VF49 1180 aa23.42■■□□□ 1.34
PNKP-224ENST00000631020 AOC3Q16853 763 aa23.42■■□□□ 1.34
PNKP-224ENST00000631020 KAZALD1Q96I82 304 aa23.42■■□□□ 1.34
PNKP-224ENST00000631020 PDE8AO60658 829 aa23.41■■□□□ 1.34
PNKP-224ENST00000631020 EPHX2P34913 555 aa23.41■■□□□ 1.34
PNKP-224ENST00000631020 CELF1Q92879 486 aaKnown RBP23.41■■□□□ 1.34
PNKP-224ENST00000631020 LTBP1Q14766 1721 aa23.4■■□□□ 1.34
PNKP-224ENST00000631020 MYH3P11055 1940 aa23.4■■□□□ 1.34
PNKP-224ENST00000631020 EPHA10Q5JZY3 1008 aa23.4■■□□□ 1.34
PNKP-224ENST00000631020 SUCLG2Q96I99 432 aa23.4■■□□□ 1.34
PNKP-224ENST00000631020 ZNRF3Q9ULT6 936 aa23.4■■□□□ 1.34
PNKP-224ENST00000631020 POTEIP0CG38 1075 aa23.39■■□□□ 1.34
PNKP-224ENST00000631020 POTEJP0CG39 1038 aa23.39■■□□□ 1.34
PNKP-224ENST00000631020 RPS8P62241 208 aaKnown RBP23.39■■□□□ 1.34
PNKP-224ENST00000631020 FOXO4P98177 505 aa23.39■■□□□ 1.34
PNKP-224ENST00000631020 CCDC152Q4G0S7 254 aa23.39■■□□□ 1.34
PNKP-224ENST00000631020 KLRG1Q96E93 195 aa23.39■■□□□ 1.34
PNKP-224ENST00000631020 PLA2G12BQ9BX93 195 aa23.39■■□□□ 1.34
PNKP-224ENST00000631020 UBTFL1P0CB47 393 aaPredicted RBP23.38■■□□□ 1.33
PNKP-224ENST00000631020 LMOD1P29536 600 aaPredicted RBP23.38■■□□□ 1.33
PNKP-224ENST00000631020 DDX19BQ9UMR2 479 aa23.38■■□□□ 1.33
PNKP-224ENST00000631020 GJA3Q9Y6H8 435 aa23.38■■□□□ 1.33
PNKP-224ENST00000631020 COL4A1P02462 1669 aa23.38■■□□□ 1.33
PNKP-224ENST00000631020 GNAI3P08754 354 aa23.37■■□□□ 1.33
PNKP-224ENST00000631020 SCNN1DP51172 638 aa23.36■■□□□ 1.33
PNKP-224ENST00000631020 HTRA3P83110 453 aa23.36■■□□□ 1.33
PNKP-224ENST00000631020 TTLL11Q8NHH1 800 aa23.36■■□□□ 1.33
PNKP-224ENST00000631020 CRBNQ96SW2 442 aa23.36■■□□□ 1.33
PNKP-224ENST00000631020 CSF1RP07333 972 aa23.35■■□□□ 1.33
PNKP-224ENST00000631020 CTSWP56202 376 aa23.35■■□□□ 1.33
PNKP-224ENST00000631020 EAPPQ56P03 285 aaPredicted RBP23.35■■□□□ 1.33
PNKP-224ENST00000631020 JMYQ8N9B5 988 aa23.35■■□□□ 1.33
PNKP-224ENST00000631020 BICC1Q9H694 974 aaKnown RBP23.35■■□□□ 1.33
PNKP-224ENST00000631020 NSFL1CQ9UNZ2 370 aaKnown RBP23.35■■□□□ 1.33
PNKP-224ENST00000631020 LRRFIP2Q9Y608 721 aaKnown RBP23.35■■□□□ 1.33
PNKP-224ENST00000631020 PASKQ96RG2 1323 aa23.35■■□□□ 1.33
PNKP-224ENST00000631020 IRX6P78412 446 aaPredicted RBP23.34■■□□□ 1.33
PNKP-224ENST00000631020 CXCL9Q07325 125 aa23.34■■□□□ 1.33
PNKP-224ENST00000631020 ANKRD44Q8N8A2 993 aa23.34■■□□□ 1.33
PNKP-224ENST00000631020 ZBTB40Q9NUA8 1239 aa23.34■■□□□ 1.33
PNKP-224ENST00000631020 PODXL2Q9NZ53 605 aa23.34■■□□□ 1.33
PNKP-224ENST00000631020 RTL9Q8NET4 1388 aa23.34■■□□□ 1.33
PNKP-224ENST00000631020 CCDC85AQ96PX6 553 aaPredicted RBP23.33■■□□□ 1.33
PNKP-224ENST00000631020 SEC31BQ9NQW1 1179 aa23.33■■□□□ 1.33
PNKP-224ENST00000631020 CREBZFQ9NS37 354 aa23.33■■□□□ 1.33
PNKP-224ENST00000631020 ITGBL1O95965 494 aaPredicted RBP23.33■■□□□ 1.32
PNKP-224ENST00000631020 TNIP1Q15025 636 aa23.33■■□□□ 1.32
PNKP-224ENST00000631020 WASHC4Q2M389 1173 aa23.33■■□□□ 1.32
PNKP-224ENST00000631020 CIAPIN1Q6FI81 312 aa23.33■■□□□ 1.32
PNKP-224ENST00000631020 LMBR1LQ6UX01 489 aa23.33■■□□□ 1.32
PNKP-224ENST00000631020 USP50Q70EL3 339 aaPredicted RBP23.33■■□□□ 1.32
PNKP-224ENST00000631020 EYA3Q99504 573 aa23.33■■□□□ 1.32
PNKP-224ENST00000631020 C1orf115Q9H7X2 142 aa23.33■■□□□ 1.32
PNKP-224ENST00000631020 GNAI2P04899 355 aa23.32■■□□□ 1.32
PNKP-224ENST00000631020 GPSM2P81274 684 aa23.32■■□□□ 1.32
PNKP-224ENST00000631020 RABL6Q3YEC7 729 aaPredicted RBP23.32■■□□□ 1.32
PNKP-224ENST00000631020 GPRC5DQ9NZD1 345 aa23.32■■□□□ 1.32
PNKP-224ENST00000631020 POLLQ9UGP5 575 aa23.32■■□□□ 1.32
PNKP-224ENST00000631020 GREM2Q9H772 168 aa23.31■■□□□ 1.32
PNKP-224ENST00000631020 CLEC11AQ9Y240 323 aa23.31■■□□□ 1.32
PNKP-224ENST00000631020 EPS15P42566 896 aa23.3■■□□□ 1.32
PNKP-224ENST00000631020 TBC1D16Q8TBP0 767 aa23.3■■□□□ 1.32
PNKP-224ENST00000631020 CDC5LQ99459 802 aaKnown RBP23.3■■□□□ 1.32
PNKP-224ENST00000631020 HDAC5Q9UQL6 1122 aa23.3■■□□□ 1.32
PNKP-224ENST00000631020 GTF3C3Q9Y5Q9 886 aa23.3■■□□□ 1.32
PNKP-224ENST00000631020 C6orf229H3BNL8 230 aa23.29■■□□□ 1.32
PNKP-224ENST00000631020 FAM161AQ3B820 660 aa23.29■■□□□ 1.32
PNKP-224ENST00000631020 ANKRD18AQ8IVF6 992 aa23.29■■□□□ 1.32
PNKP-224ENST00000631020 EXOC6Q8TAG9 804 aa23.29■■□□□ 1.32
PNKP-224ENST00000631020 ADARB2Q9NS39 739 aaKnown RBP23.29■■□□□ 1.32
PNKP-224ENST00000631020 YDJCA8MPS7 323 aa23.28■■□□□ 1.32
PNKP-224ENST00000631020 CNTROBQ8N137 903 aa23.28■■□□□ 1.32
PNKP-224ENST00000631020 CHMP4BQ9H444 224 aaKnown RBP23.28■■□□□ 1.32
PNKP-224ENST00000631020 PCNTO95613 3336 aa23.28■■□□□ 1.32
PNKP-224ENST00000631020 RAD17O75943 681 aa23.27■■□□□ 1.32
PNKP-224ENST00000631020 GMPSP49915 693 aaPredicted RBP23.27■■□□□ 1.32
PNKP-224ENST00000631020 ANKIB1Q9P2G1 1089 aa23.27■■□□□ 1.32
PNKP-224ENST00000631020 CHMP3Q9Y3E7 222 aa23.27■■□□□ 1.32
PNKP-224ENST00000631020 XDHP47989 1333 aa23.27■■□□□ 1.32
PNKP-224ENST00000631020 ITGA6P23229 1130 aa23.26■■□□□ 1.31
PNKP-224ENST00000631020 ZC3H12CQ9C0D7 883 aaKnown RBP23.26■■□□□ 1.31
PNKP-224ENST00000631020 BSDC1Q9NW68 430 aaPredicted RBP23.26■■□□□ 1.31
PNKP-224ENST00000631020 GGA1Q9UJY5 639 aa23.26■■□□□ 1.31
PNKP-224ENST00000631020 MTX1Q13505 466 aa23.25■■□□□ 1.31
PNKP-224ENST00000631020 MAP1SQ66K74 1059 aaPredicted RBP23.25■■□□□ 1.31
PNKP-224ENST00000631020 DPF2Q92785 391 aa23.25■■□□□ 1.31
PNKP-224ENST00000631020 TMEM88BA6NKF7 163 aa23.24■■□□□ 1.31
PNKP-224ENST00000631020 UFL1O94874 794 aa23.24■■□□□ 1.31
PNKP-224ENST00000631020 DBNDD1Q9H9R9 158 aa23.24■■□□□ 1.31
PNKP-224ENST00000631020 SPEF2Q9C093 1822 aa23.24■■□□□ 1.31
PNKP-224ENST00000631020 PSME4Q14997 1843 aa23.24■■□□□ 1.31
PNKP-224ENST00000631020 PNMA6EA0A0J9YXQ4 647 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms