RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	PUS3	Q9BZE2	481 aa	Known RBP	32.39	■■■□□ 2.78
UBE3A-222	ENST00000630907	TAOK3	Q9H2K8	898 aa		32.39	■■■□□ 2.78
UBE3A-222	ENST00000630907	COPRS	Q9NQ92	184 aa		32.39	■■■□□ 2.78
UBE3A-222	ENST00000630907	LRRC37A	A6NMS7	1700 aa		32.38	■■■□□ 2.77
UBE3A-222	ENST00000630907	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.38	■■■□□ 2.77
UBE3A-222	ENST00000630907	POLA2	Q14181	598 aa		32.38	■■■□□ 2.77
UBE3A-222	ENST00000630907	SSH3	Q8TE77	659 aa		32.38	■■■□□ 2.77
UBE3A-222	ENST00000630907	ANKIB1	Q9P2G1	1089 aa		32.38	■■■□□ 2.77
UBE3A-222	ENST00000630907	SPEF2	Q9C093	1822 aa		32.37	■■■□□ 2.77
UBE3A-222	ENST00000630907	LTBP3	Q9NS15	1303 aa		32.37	■■■□□ 2.77
UBE3A-222	ENST00000630907	IRX6	P78412	446 aa	Predicted RBP	32.37	■■■□□ 2.77
UBE3A-222	ENST00000630907	RASSF7	Q02833	373 aa		32.37	■■■□□ 2.77
UBE3A-222	ENST00000630907	PSMD1	Q99460	953 aa		32.37	■■■□□ 2.77
UBE3A-222	ENST00000630907	ANKRD2	Q9GZV1	360 aa		32.37	■■■□□ 2.77
UBE3A-222	ENST00000630907	PA2G4	Q9UQ80	394 aa	Known RBP	32.37	■■■□□ 2.77
UBE3A-222	ENST00000630907	XDH	P47989	1333 aa		32.36	■■■□□ 2.77
UBE3A-222	ENST00000630907	EYA2	O00167	538 aa		32.36	■■■□□ 2.77
UBE3A-222	ENST00000630907	CHRND	Q07001	517 aa		32.36	■■■□□ 2.77
UBE3A-222	ENST00000630907	LRRC24	Q50LG9	513 aa		32.36	■■■□□ 2.77
UBE3A-222	ENST00000630907	EXOC6	Q8TAG9	804 aa		32.36	■■■□□ 2.77
UBE3A-222	ENST00000630907	PODXL2	Q9NZ53	605 aa		32.36	■■■□□ 2.77
UBE3A-222	ENST00000630907	FBXO3	Q9UK99	471 aa		32.36	■■■□□ 2.77
UBE3A-222	ENST00000630907	RIPOR2	Q9Y4F9	1068 aa		32.36	■■■□□ 2.77
UBE3A-222	ENST00000630907	SIL1	Q9H173	461 aa		32.35	■■■□□ 2.77
UBE3A-222	ENST00000630907	FER1L6	Q2WGJ9	1857 aa		32.34	■■■□□ 2.77
UBE3A-222	ENST00000630907	AAMP	Q13685	434 aa		32.34	■■■□□ 2.77
UBE3A-222	ENST00000630907	SUPT20H	Q8NEM7	779 aa		32.34	■■■□□ 2.77
UBE3A-222	ENST00000630907	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.34	■■■□□ 2.77
UBE3A-222	ENST00000630907	CIAO1	O76071	339 aa		32.33	■■■□□ 2.77
UBE3A-222	ENST00000630907	GGA1	Q9UJY5	639 aa		32.33	■■■□□ 2.77
UBE3A-222	ENST00000630907	MROH5	Q6ZUA9	1318 aa		32.32	■■■□□ 2.76
UBE3A-222	ENST00000630907	HMMR	O75330	724 aa		32.32	■■■□□ 2.76
UBE3A-222	ENST00000630907	ATP2B4	P23634	1241 aa		32.32	■■■□□ 2.76
UBE3A-222	ENST00000630907	HELB	Q8NG08	1087 aa	Predicted RBP	32.32	■■■□□ 2.76
UBE3A-222	ENST00000630907	TBC1D16	Q8TBP0	767 aa		32.32	■■■□□ 2.76
UBE3A-222	ENST00000630907	C6orf229	H3BNL8	230 aa		32.31	■■■□□ 2.76
UBE3A-222	ENST00000630907	METTL24	Q5JXM2	366 aa		32.31	■■■□□ 2.76
UBE3A-222	ENST00000630907	SIRT2	Q8IXJ6	389 aa		32.31	■■■□□ 2.76
UBE3A-222	ENST00000630907	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.31	■■■□□ 2.76
UBE3A-222	ENST00000630907	POLL	Q9UGP5	575 aa		32.31	■■■□□ 2.76
UBE3A-222	ENST00000630907	GOLGB1	Q14789	3259 aa	Known RBP	32.31	■■■□□ 2.76
UBE3A-222	ENST00000630907	TAF5L	O75529	589 aa		32.3	■■■□□ 2.76
UBE3A-222	ENST00000630907	UFL1	O94874	794 aa		32.3	■■■□□ 2.76
UBE3A-222	ENST00000630907	IL15	P40933	162 aa	Predicted RBP	32.3	■■■□□ 2.76
UBE3A-222	ENST00000630907	ATG9A	Q7Z3C6	839 aa		32.3	■■■□□ 2.76
UBE3A-222	ENST00000630907	LEMD3	Q9Y2U8	911 aa		32.3	■■■□□ 2.76
UBE3A-222	ENST00000630907	LMNB1	P20700	586 aa		32.29	■■■□□ 2.76
UBE3A-222	ENST00000630907	G3BP1	Q13283	466 aa	Known RBP eCLIP	32.29	■■■□□ 2.76
UBE3A-222	ENST00000630907	PCDHB15	Q9Y5E8	787 aa		32.29	■■■□□ 2.76
UBE3A-222	ENST00000630907	SURF6	O75683	361 aa	Known RBP	32.28	■■■□□ 2.76
UBE3A-222	ENST00000630907	PRELP	P51888	382 aa		32.28	■■■□□ 2.76
UBE3A-222	ENST00000630907	EYA3	Q99504	573 aa		32.28	■■■□□ 2.76
UBE3A-222	ENST00000630907	IARS	P41252	1262 aa	Known RBP	32.27	■■■□□ 2.76
UBE3A-222	ENST00000630907	KCNJ4	P48050	445 aa		32.27	■■■□□ 2.76
UBE3A-222	ENST00000630907	VPS33B	Q9H267	617 aa		32.27	■■■□□ 2.76
UBE3A-222	ENST00000630907	DUOX1	Q9NRD9	1551 aa		32.27	■■■□□ 2.76
UBE3A-222	ENST00000630907	ZNF804B	A4D1E1	1349 aa		32.26	■■■□□ 2.76
UBE3A-222	ENST00000630907	LTBP1	Q14766	1721 aa		32.26	■■■□□ 2.76
UBE3A-222	ENST00000630907	NOP58	Q9Y2X3	529 aa	Known RBP	32.26	■■■□□ 2.75
UBE3A-222	ENST00000630907	WASHC4	Q2M389	1173 aa		32.25	■■■□□ 2.75
UBE3A-222	ENST00000630907	C9orf131	Q5VYM1	1079 aa		32.25	■■■□□ 2.75
UBE3A-222	ENST00000630907	GPR101	Q96P66	508 aa	Predicted RBP	32.25	■■■□□ 2.75
UBE3A-222	ENST00000630907	CEP126	Q9P2H0	1117 aa		32.25	■■■□□ 2.75
UBE3A-222	ENST00000630907	WTIP	A6NIX2	430 aa	Predicted RBP	32.24	■■■□□ 2.75
UBE3A-222	ENST00000630907	PPIP5K2	O43314	1243 aa		32.24	■■■□□ 2.75
UBE3A-222	ENST00000630907	PDE8B	O95263	885 aa		32.24	■■■□□ 2.75
UBE3A-222	ENST00000630907	VGLL2	Q8N8G2	317 aa		32.24	■■■□□ 2.75
UBE3A-222	ENST00000630907	RNF181	Q9P0P0	153 aa		32.24	■■■□□ 2.75
UBE3A-222	ENST00000630907	OS9	Q13438	667 aa	Predicted RBP	32.23	■■■□□ 2.75
UBE3A-222	ENST00000630907	AOC3	Q16853	763 aa		32.23	■■■□□ 2.75
UBE3A-222	ENST00000630907	LARGE2	Q8N3Y3	721 aa		32.23	■■■□□ 2.75
UBE3A-222	ENST00000630907	ZC3H12C	Q9C0D7	883 aa	Known RBP	32.23	■■■□□ 2.75
UBE3A-222	ENST00000630907	SNAP23	O00161	211 aa		32.22	■■■□□ 2.75
UBE3A-222	ENST00000630907	RIMBP2	O15034	1052 aa		32.22	■■■□□ 2.75
UBE3A-222	ENST00000630907	KIAA2012	Q0VF49	1180 aa		32.22	■■■□□ 2.75
UBE3A-222	ENST00000630907	UBE4A	Q14139	1066 aa		32.21	■■■□□ 2.75
UBE3A-222	ENST00000630907	EXOC6B	Q9Y2D4	811 aa		32.2	■■■□□ 2.75
UBE3A-222	ENST00000630907	SBF1	O95248	1867 aa		32.19	■■■□□ 2.74
UBE3A-222	ENST00000630907	TFCP2	Q12800	502 aa		32.19	■■■□□ 2.74
UBE3A-222	ENST00000630907	HSP90AB4P	Q58FF6	505 aa		32.19	■■■□□ 2.74
UBE3A-222	ENST00000630907	JDP2	Q8WYK2	163 aa		32.19	■■■□□ 2.74
UBE3A-222	ENST00000630907		A0A1B0GUL6	1792 aa		32.19	■■■□□ 2.74
UBE3A-222	ENST00000630907	MED23	Q9ULK4	1368 aa		32.19	■■■□□ 2.74
UBE3A-222	ENST00000630907	PUM3	Q15397	648 aa	Known RBP	32.18	■■■□□ 2.74
UBE3A-222	ENST00000630907	SASH1	O94885	1247 aa		32.17	■■■□□ 2.74
UBE3A-222	ENST00000630907	ERC1	Q8IUD2	1116 aa		32.17	■■■□□ 2.74
UBE3A-222	ENST00000630907	NIM1K	Q8IY84	436 aa		32.17	■■■□□ 2.74
UBE3A-222	ENST00000630907	UTRN	P46939	3433 aa		32.16	■■■□□ 2.74
UBE3A-222	ENST00000630907	NEFL	P07196	543 aa		32.16	■■■□□ 2.74
UBE3A-222	ENST00000630907	FGFR2	P21802	821 aa		32.16	■■■□□ 2.74
UBE3A-222	ENST00000630907	KLRK1	P26718	216 aa		32.16	■■■□□ 2.74
UBE3A-222	ENST00000630907	C15orf52	Q6ZUT6	534 aa	Known RBP	32.16	■■■□□ 2.74
UBE3A-222	ENST00000630907	CCDC88A	Q3V6T2	1871 aa		32.15	■■■□□ 2.74
UBE3A-222	ENST00000630907		G3V3G9	751 aa		32.15	■■■□□ 2.74
UBE3A-222	ENST00000630907	ATP2B3	Q16720	1220 aa		32.15	■■■□□ 2.74
UBE3A-222	ENST00000630907	DCAF8	Q5TAQ9	597 aa		32.15	■■■□□ 2.74
UBE3A-222	ENST00000630907	TXNRD3	Q86VQ6	643 aa		32.15	■■■□□ 2.74
UBE3A-222	ENST00000630907	AKAP2	Q9Y2D5	859 aa		32.15	■■■□□ 2.74
UBE3A-222	ENST00000630907	IFIT1	P09914	478 aa	Known RBP	32.14	■■■□□ 2.74
UBE3A-222	ENST00000630907	DOK7	Q18PE1	504 aa		32.14	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms