RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 SEC31BQ9NQW1 1179 aa24.54■■□□□ 1.52
SMN1-211ENST00000625245 KCNQ5Q9NR82 932 aa24.54■■□□□ 1.52
SMN1-211ENST00000625245 JARID2Q92833 1246 aaPredicted RBP24.53■■□□□ 1.52
SMN1-211ENST00000625245 ZC3H12CQ9C0D7 883 aaKnown RBP24.53■■□□□ 1.52
SMN1-211ENST00000625245 G3V3G9 751 aa24.52■■□□□ 1.52
SMN1-211ENST00000625245 HSP90B1P14625 803 aaKnown RBP24.52■■□□□ 1.52
SMN1-211ENST00000625245 DCAF8Q5TAQ9 597 aa24.52■■□□□ 1.52
SMN1-211ENST00000625245 DLK2Q6UY11 383 aa24.52■■□□□ 1.52
SMN1-211ENST00000625245 ABHD8Q96I13 439 aa24.52■■□□□ 1.52
SMN1-211ENST00000625245 C8orf58Q8NAV2 365 aa24.51■■□□□ 1.51
SMN1-211ENST00000625245 HHIPL1Q96JK4 782 aa24.51■■□□□ 1.51
SMN1-211ENST00000625245 CCDC85AQ96PX6 553 aaPredicted RBP24.51■■□□□ 1.51
SMN1-211ENST00000625245 ANKIB1Q9P2G1 1089 aa24.51■■□□□ 1.51
SMN1-211ENST00000625245 RPS12P25398 132 aaKnown RBP24.5■■□□□ 1.51
SMN1-211ENST00000625245 CCDC191Q8NCU4 936 aa24.5■■□□□ 1.51
SMN1-211ENST00000625245 UFL1O94874 794 aa24.49■■□□□ 1.51
SMN1-211ENST00000625245 EGFRP00533 1210 aa24.49■■□□□ 1.51
SMN1-211ENST00000625245 CCDC152Q4G0S7 254 aa24.49■■□□□ 1.51
SMN1-211ENST00000625245 KRT26Q7Z3Y9 468 aa24.49■■□□□ 1.51
SMN1-211ENST00000625245 CWC25Q9NXE8 425 aaPredicted RBP24.49■■□□□ 1.51
SMN1-211ENST00000625245 RTL9Q8NET4 1388 aa24.49■■□□□ 1.51
SMN1-211ENST00000625245 DDX58O95786 925 aaKnown RBP24.48■■□□□ 1.51
SMN1-211ENST00000625245 PCCAP05165 728 aaPredicted RBP24.48■■□□□ 1.51
SMN1-211ENST00000625245 HUNKP57058 714 aa24.48■■□□□ 1.51
SMN1-211ENST00000625245 DCPSQ96C86 337 aaKnown RBP24.48■■□□□ 1.51
SMN1-211ENST00000625245 GGA1Q9UJY5 639 aa24.48■■□□□ 1.51
SMN1-211ENST00000625245 SCN9AQ15858 1988 aa24.47■■□□□ 1.51
SMN1-211ENST00000625245 PDE8AO60658 829 aa24.47■■□□□ 1.51
SMN1-211ENST00000625245 CCDC30Q5VVM6 783 aa24.47■■□□□ 1.51
SMN1-211ENST00000625245 METTL22Q9BUU2 404 aaPredicted RBP24.47■■□□□ 1.51
SMN1-211ENST00000625245 PODXL2Q9NZ53 605 aa24.47■■□□□ 1.51
SMN1-211ENST00000625245 CASP8AP2Q9UKL3 1982 aa24.46■■□□□ 1.51
SMN1-211ENST00000625245 ADM5C9JUS6 153 aa24.45■■□□□ 1.5
SMN1-211ENST00000625245 CA12O43570 354 aa24.45■■□□□ 1.5
SMN1-211ENST00000625245 VIL1P09327 827 aaKnown RBP24.45■■□□□ 1.5
SMN1-211ENST00000625245 BRPF1P55201 1214 aaPredicted RBP24.45■■□□□ 1.5
SMN1-211ENST00000625245 KIF4BQ2VIQ3 1234 aa24.45■■□□□ 1.5
SMN1-211ENST00000625245 CHMP4AQ9BY43 222 aa24.45■■□□□ 1.5
SMN1-211ENST00000625245 MAP3K2Q9Y2U5 619 aa24.45■■□□□ 1.5
SMN1-211ENST00000625245 CCDC85CA6NKD9 419 aa24.44■■□□□ 1.5
SMN1-211ENST00000625245 ANKRD18AQ8IVF6 992 aa24.44■■□□□ 1.5
SMN1-211ENST00000625245 C2orf69Q8N8R5 385 aa24.44■■□□□ 1.5
SMN1-211ENST00000625245 GBA2Q9HCG7 927 aaPredicted RBP24.44■■□□□ 1.5
SMN1-211ENST00000625245 NOGQ13253 232 aa24.43■■□□□ 1.5
SMN1-211ENST00000625245 TSPYL6Q8N831 410 aa24.43■■□□□ 1.5
SMN1-211ENST00000625245 ZIC5Q96T25 663 aa24.43■■□□□ 1.5
SMN1-211ENST00000625245 RGMBQ6NW40 437 aa24.41■■□□□ 1.5
SMN1-211ENST00000625245 SULF1Q8IWU6 871 aa24.41■■□□□ 1.5
SMN1-211ENST00000625245 GGA3Q9NZ52 723 aa24.41■■□□□ 1.5
SMN1-211ENST00000625245 XDHP47989 1333 aa24.4■■□□□ 1.5
SMN1-211ENST00000625245 PI4KAP2A4QPH2 592 aa24.4■■□□□ 1.5
SMN1-211ENST00000625245 RSBN1LQ6PCB5 846 aaPredicted RBP24.4■■□□□ 1.5
SMN1-211ENST00000625245 KSR2Q6VAB6 950 aa24.4■■□□□ 1.5
SMN1-211ENST00000625245 PI4KAP1Q8N8J0 262 aa24.4■■□□□ 1.5
SMN1-211ENST00000625245 TSR2Q969E8 191 aaKnown RBP24.4■■□□□ 1.5
SMN1-211ENST00000625245 ASTN2O75129 1339 aaPredicted RBP24.39■■□□□ 1.5
SMN1-211ENST00000625245 STK31Q9BXU1 1019 aa24.39■■□□□ 1.49
SMN1-211ENST00000625245 IGKV5-2P06315 115 aa24.38■■□□□ 1.49
SMN1-211ENST00000625245 ATP2B4P23634 1241 aa24.38■■□□□ 1.49
SMN1-211ENST00000625245 ZNF157P51786 506 aaPredicted RBP24.38■■□□□ 1.49
SMN1-211ENST00000625245 CTSWP56202 376 aa24.38■■□□□ 1.49
SMN1-211ENST00000625245 NEXNQ0ZGT2 675 aa24.38■■□□□ 1.49
SMN1-211ENST00000625245 CDC5LQ99459 802 aaKnown RBP24.38■■□□□ 1.49
SMN1-211ENST00000625245 SCARF1Q14162 830 aa24.37■■□□□ 1.49
SMN1-211ENST00000625245 AGBL3Q8NEM8 1001 aa24.37■■□□□ 1.49
SMN1-211ENST00000625245 CCDC102AQ96A19 550 aa24.37■■□□□ 1.49
SMN1-211ENST00000625245 SPEF2Q9C093 1822 aa24.37■■□□□ 1.49
SMN1-211ENST00000625245 MYH3P11055 1940 aa24.37■■□□□ 1.49
SMN1-211ENST00000625245 PSME4Q14997 1843 aa24.36■■□□□ 1.49
SMN1-211ENST00000625245 FAM155AB1AL88 458 aaPredicted RBP24.36■■□□□ 1.49
SMN1-211ENST00000625245 ZNF280AP59817 542 aaPredicted RBP24.36■■□□□ 1.49
SMN1-211ENST00000625245 ANGEL2Q5VTE6 544 aaKnown RBP24.36■■□□□ 1.49
SMN1-211ENST00000625245 TTLL11Q8NHH1 800 aa24.36■■□□□ 1.49
SMN1-211ENST00000625245 MCOLN1Q9GZU1 580 aa24.36■■□□□ 1.49
SMN1-211ENST00000625245 USP17L3A6NCW0 530 aa24.35■■□□□ 1.49
SMN1-211ENST00000625245 USP17L4A6NCW7 530 aa24.35■■□□□ 1.49
SMN1-211ENST00000625245 WTIPA6NIX2 430 aaPredicted RBP24.35■■□□□ 1.49
SMN1-211ENST00000625245 USP17L8P0C7I0 530 aa24.35■■□□□ 1.49
SMN1-211ENST00000625245 KIF23Q02241 960 aaPredicted RBP24.35■■□□□ 1.49
SMN1-211ENST00000625245 CWF19L2Q2TBE0 894 aaKnown RBP24.35■■□□□ 1.49
SMN1-211ENST00000625245 FAM161AQ3B820 660 aa24.35■■□□□ 1.49
SMN1-211ENST00000625245 USP17L1Q7RTZ2 530 aa24.35■■□□□ 1.49
SMN1-211ENST00000625245 CDCA5Q96FF9 252 aa24.35■■□□□ 1.49
SMN1-211ENST00000625245 GREM2Q9H772 168 aa24.35■■□□□ 1.49
SMN1-211ENST00000625245 CCDC184Q52MB2 194 aa24.34■■□□□ 1.49
SMN1-211ENST00000625245 PODNQ7Z5L7 613 aa24.34■■□□□ 1.49
SMN1-211ENST00000625245 MINPP1Q9UNW1 487 aa24.34■■□□□ 1.49
SMN1-211ENST00000625245 DGKZQ13574 1117 aa24.33■■□□□ 1.49
SMN1-211ENST00000625245 TWISTNBQ3B726 338 aaPredicted RBP24.33■■□□□ 1.49
SMN1-211ENST00000625245 G2E3Q7L622 706 aa24.33■■□□□ 1.49
SMN1-211ENST00000625245 FBXW7Q969H0 707 aa24.33■■□□□ 1.49
SMN1-211ENST00000625245 MYOZ2Q9NPC6 264 aa24.33■■□□□ 1.49
SMN1-211ENST00000625245 BSDC1Q9NW68 430 aaPredicted RBP24.33■■□□□ 1.49
SMN1-211ENST00000625245 AKAP11Q9UKA4 1901 aa24.33■■□□□ 1.49
SMN1-211ENST00000625245 NEURL1BA8MQ27 555 aa24.32■■□□□ 1.48
SMN1-211ENST00000625245 SLC4A2P04920 1241 aa24.32■■□□□ 1.48
SMN1-211ENST00000625245 UBE3BQ7Z3V4 1068 aa24.32■■□□□ 1.48
SMN1-211ENST00000625245 GMLQ99445 158 aa24.32■■□□□ 1.48
SMN1-211ENST00000625245 ZNF609O15014 1411 aa24.31■■□□□ 1.48
SMN1-211ENST00000625245 WWC1Q8IX03 1113 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms