RNA–Protein interactions for RNA: ENST00000623915.1

PCDHB5-202, Transcript of protocadherin beta 5, humanhuman

TSL 3

Gene PCDHB5, Length 869 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-202ENST00000623915 NEXNQ0ZGT2 675 aa23.39■■□□□ 1.33
PCDHB5-202ENST00000623915 FKBP5Q13451 457 aaPredicted RBP23.39■■□□□ 1.33
PCDHB5-202ENST00000623915 SSH1Q8WYL5 1049 aa23.39■■□□□ 1.33
PCDHB5-202ENST00000623915 FAM89AQ96GI7 184 aa23.39■■□□□ 1.33
PCDHB5-202ENST00000623915 ATP5J2-PTCD1G3V325 749 aa23.38■■□□□ 1.33
PCDHB5-202ENST00000623915 SF3B3Q15393 1217 aaKnown RBP23.38■■□□□ 1.33
PCDHB5-202ENST00000623915 TMC4Q7Z404 712 aa23.38■■□□□ 1.33
PCDHB5-202ENST00000623915 LINS1Q8NG48 757 aa23.38■■□□□ 1.33
PCDHB5-202ENST00000623915 CELF1Q92879 486 aaKnown RBP23.38■■□□□ 1.33
PCDHB5-202ENST00000623915 CAPNS2Q96L46 248 aa23.38■■□□□ 1.33
PCDHB5-202ENST00000623915 MYD88Q99836 296 aa23.38■■□□□ 1.33
PCDHB5-202ENST00000623915 CWC25Q9NXE8 425 aaPredicted RBP23.38■■□□□ 1.33
PCDHB5-202ENST00000623915 PGAP2Q9UHJ9 254 aa23.38■■□□□ 1.33
PCDHB5-202ENST00000623915 TLL2Q9Y6L7 1015 aa23.38■■□□□ 1.33
PCDHB5-202ENST00000623915 HIRAP54198 1017 aaPredicted RBP23.37■■□□□ 1.33
PCDHB5-202ENST00000623915 SHTN1A0MZ66 631 aa23.36■■□□□ 1.33
PCDHB5-202ENST00000623915 NEURL1BA8MQ27 555 aa23.36■■□□□ 1.33
PCDHB5-202ENST00000623915 MAP2K1Q02750 393 aaPredicted RBP23.36■■□□□ 1.33
PCDHB5-202ENST00000623915 CYP4F22Q6NT55 531 aa23.36■■□□□ 1.33
PCDHB5-202ENST00000623915 TRPM4Q8TD43 1214 aa23.36■■□□□ 1.33
PCDHB5-202ENST00000623915 GLIS2Q9BZE0 524 aaPredicted RBP23.36■■□□□ 1.33
PCDHB5-202ENST00000623915 TNIP1Q15025 636 aa23.35■■□□□ 1.33
PCDHB5-202ENST00000623915 BEND3Q5T5X7 828 aa23.34■■□□□ 1.33
PCDHB5-202ENST00000623915 RARSP54136 660 aaKnown RBP23.33■■□□□ 1.33
PCDHB5-202ENST00000623915 RTL5Q5HYW3 569 aaPredicted RBP23.33■■□□□ 1.33
PCDHB5-202ENST00000623915 BCL2L13Q9BXK5 485 aa23.33■■□□□ 1.33
PCDHB5-202ENST00000623915 H7C1W4 665 aa23.32■■□□□ 1.32
PCDHB5-202ENST00000623915 ALDH1L1O75891 902 aa23.32■■□□□ 1.32
PCDHB5-202ENST00000623915 CELF2O95319 508 aaKnown RBP23.32■■□□□ 1.32
PCDHB5-202ENST00000623915 ECE1P42892 770 aa23.32■■□□□ 1.32
PCDHB5-202ENST00000623915 GCKRQ14397 625 aa23.32■■□□□ 1.32
PCDHB5-202ENST00000623915 PAXIP1Q6ZW49 1069 aaPredicted RBP23.32■■□□□ 1.32
PCDHB5-202ENST00000623915 SAPCD2Q86UD0 394 aa23.32■■□□□ 1.32
PCDHB5-202ENST00000623915 ZC3H15Q8WU90 426 aaKnown RBP23.32■■□□□ 1.32
PCDHB5-202ENST00000623915 ARHGAP45Q92619 1136 aa23.32■■□□□ 1.32
PCDHB5-202ENST00000623915 PLA2G12BQ9BX93 195 aa23.32■■□□□ 1.32
PCDHB5-202ENST00000623915 POLLQ9UGP5 575 aa23.32■■□□□ 1.32
PCDHB5-202ENST00000623915 IRS4O14654 1257 aaPredicted RBP23.31■■□□□ 1.32
PCDHB5-202ENST00000623915 GPSM2P81274 684 aa23.31■■□□□ 1.32
PCDHB5-202ENST00000623915 WASHC4Q2M389 1173 aa23.31■■□□□ 1.32
PCDHB5-202ENST00000623915 GPR101Q96P66 508 aaPredicted RBP23.31■■□□□ 1.32
PCDHB5-202ENST00000623915 CNOT7Q9UIV1 285 aaKnown RBP23.31■■□□□ 1.32
PCDHB5-202ENST00000623915 NSFL1CQ9UNZ2 370 aaKnown RBP23.31■■□□□ 1.32
PCDHB5-202ENST00000623915 ZBTB12Q9Y330 459 aaPredicted RBP23.31■■□□□ 1.32
PCDHB5-202ENST00000623915 RTL9Q8NET4 1388 aa23.3■■□□□ 1.32
PCDHB5-202ENST00000623915 PSMD14O00487 310 aa23.3■■□□□ 1.32
PCDHB5-202ENST00000623915 CASP7P55210 303 aa23.3■■□□□ 1.32
PCDHB5-202ENST00000623915 GRM1Q13255 1194 aa23.3■■□□□ 1.32
PCDHB5-202ENST00000623915 MICALL2Q8IY33 904 aa23.3■■□□□ 1.32
PCDHB5-202ENST00000623915 DBNDD1Q9H9R9 158 aa23.3■■□□□ 1.32
PCDHB5-202ENST00000623915 KIF16BQ96L93 1317 aa23.3■■□□□ 1.32
PCDHB5-202ENST00000623915 SCN9AQ15858 1988 aa23.29■■□□□ 1.32
PCDHB5-202ENST00000623915 AOC2O75106 756 aa23.29■■□□□ 1.32
PCDHB5-202ENST00000623915 CWF19L2Q2TBE0 894 aaKnown RBP23.29■■□□□ 1.32
PCDHB5-202ENST00000623915 SMC4Q9NTJ3 1288 aa23.29■■□□□ 1.32
PCDHB5-202ENST00000623915 F6X3S4 739 aa23.28■■□□□ 1.32
PCDHB5-202ENST00000623915 PDE8AO60658 829 aa23.28■■□□□ 1.32
PCDHB5-202ENST00000623915 EGFRP00533 1210 aa23.28■■□□□ 1.32
PCDHB5-202ENST00000623915 DPF2Q92785 391 aa23.28■■□□□ 1.32
PCDHB5-202ENST00000623915 KCNQ5Q9NR82 932 aa23.28■■□□□ 1.32
PCDHB5-202ENST00000623915 UTYO14607 1347 aa23.28■■□□□ 1.32
PCDHB5-202ENST00000623915 RIMBP2O15034 1052 aa23.27■■□□□ 1.32
PCDHB5-202ENST00000623915 RPS8P62241 208 aaKnown RBP23.27■■□□□ 1.32
PCDHB5-202ENST00000623915 CDC37L1Q7L3B6 337 aa23.27■■□□□ 1.32
PCDHB5-202ENST00000623915 TBC1D16Q8TBP0 767 aa23.27■■□□□ 1.32
PCDHB5-202ENST00000623915 HHIPL1Q96JK4 782 aa23.27■■□□□ 1.32
PCDHB5-202ENST00000623915 C6orf229H3BNL8 230 aa23.26■■□□□ 1.31
PCDHB5-202ENST00000623915 H7C1D1 291 aa23.26■■□□□ 1.31
PCDHB5-202ENST00000623915 ECE2O60344 883 aa23.26■■□□□ 1.31
PCDHB5-202ENST00000623915 MAP2K2P36507 400 aa23.26■■□□□ 1.31
PCDHB5-202ENST00000623915 DLK2Q6UY11 383 aa23.26■■□□□ 1.31
PCDHB5-202ENST00000623915 SAMD7Q7Z3H4 446 aa23.26■■□□□ 1.31
PCDHB5-202ENST00000623915 SEC31BQ9NQW1 1179 aa23.26■■□□□ 1.31
PCDHB5-202ENST00000623915 SRCIN1Q9C0H9 1055 aa23.25■■□□□ 1.31
PCDHB5-202ENST00000623915 ZNF408Q9H9D4 720 aa23.25■■□□□ 1.31
PCDHB5-202ENST00000623915 PODXL2Q9NZ53 605 aa23.25■■□□□ 1.31
PCDHB5-202ENST00000623915 DOK7Q18PE1 504 aa23.24■■□□□ 1.31
PCDHB5-202ENST00000623915 ABHD8Q96I13 439 aa23.24■■□□□ 1.31
PCDHB5-202ENST00000623915 API5Q9BZZ5 524 aaKnown RBP23.24■■□□□ 1.31
PCDHB5-202ENST00000623915 RPS12P25398 132 aaKnown RBP23.23■■□□□ 1.31
PCDHB5-202ENST00000623915 TBC1D10BQ4KMP7 808 aaPredicted RBP23.23■■□□□ 1.31
PCDHB5-202ENST00000623915 USP48Q86UV5 1035 aa23.23■■□□□ 1.31
PCDHB5-202ENST00000623915 EYA3Q99504 573 aa23.23■■□□□ 1.31
PCDHB5-202ENST00000623915 TSKSQ9UJT2 592 aa23.23■■□□□ 1.31
PCDHB5-202ENST00000623915 GRM8O00222 908 aa23.22■■□□□ 1.31
PCDHB5-202ENST00000623915 CCDC152Q4G0S7 254 aa23.22■■□□□ 1.31
PCDHB5-202ENST00000623915 BEGAINQ9BUH8 593 aa23.22■■□□□ 1.31
PCDHB5-202ENST00000623915 PSME4Q14997 1843 aa23.22■■□□□ 1.31
PCDHB5-202ENST00000623915 POLR2AP24928 1970 aaKnown RBP23.21■■□□□ 1.31
PCDHB5-202ENST00000623915 CSF1RP07333 972 aa23.21■■□□□ 1.31
PCDHB5-202ENST00000623915 CTSWP56202 376 aa23.21■■□□□ 1.31
PCDHB5-202ENST00000623915 UBE3BQ7Z3V4 1068 aa23.21■■□□□ 1.31
PCDHB5-202ENST00000623915 TTLL11Q8NHH1 800 aa23.21■■□□□ 1.31
PCDHB5-202ENST00000623915 JARID2Q92833 1246 aaPredicted RBP23.21■■□□□ 1.31
PCDHB5-202ENST00000623915 NOB1Q9ULX3 412 aaKnown RBP23.21■■□□□ 1.31
PCDHB5-202ENST00000623915 ZNF609O15014 1411 aa23.21■■□□□ 1.31
PCDHB5-202ENST00000623915 IPO8O15397 1037 aaKnown RBP23.2■■□□□ 1.3
PCDHB5-202ENST00000623915 UFL1O94874 794 aa23.2■■□□□ 1.3
PCDHB5-202ENST00000623915 VIL1P09327 827 aaKnown RBP23.19■■□□□ 1.3
PCDHB5-202ENST00000623915 CCT4P50991 539 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms