RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 SYT9Q86SS6 491 aa6.47□□□□□ -1.37
ATRX-209ENST00000623242 EPS8L3Q8TE67 593 aaKnown RBP6.47□□□□□ -1.37
ATRX-209ENST00000623242 CCDC74AQ96AQ1 378 aa6.47□□□□□ -1.37
ATRX-209ENST00000623242 FAM161BQ96MY7 647 aa6.47□□□□□ -1.37
ATRX-209ENST00000623242 PNMA5Q96PV4 448 aa6.47□□□□□ -1.37
ATRX-209ENST00000623242 PARP2Q9UGN5 583 aa6.47□□□□□ -1.37
ATRX-209ENST00000623242 NEFLP07196 543 aa6.46□□□□□ -1.38
ATRX-209ENST00000623242 BMP4P12644 408 aa6.46□□□□□ -1.38
ATRX-209ENST00000623242 HOXD8P13378 290 aaPredicted RBP6.46□□□□□ -1.38
ATRX-209ENST00000623242 MX2P20592 715 aa6.46□□□□□ -1.38
ATRX-209ENST00000623242 CES1P23141 567 aa6.46□□□□□ -1.38
ATRX-209ENST00000623242 PCBP4P57723 403 aaKnown RBP6.46□□□□□ -1.38
ATRX-209ENST00000623242 ZNF326Q5BKZ1 582 aaKnown RBP6.46□□□□□ -1.38
ATRX-209ENST00000623242 ZNF468Q5VIY5 522 aaPredicted RBP6.46□□□□□ -1.38
ATRX-209ENST00000623242 ALG1LQ6GMV1 187 aa6.46□□□□□ -1.38
ATRX-209ENST00000623242 DHX32Q7L7V1 743 aaKnown RBP6.46□□□□□ -1.38
ATRX-209ENST00000623242 GALNT12Q8IXK2 581 aa6.46□□□□□ -1.38
ATRX-209ENST00000623242 MDFIQ99750 246 aa6.46□□□□□ -1.38
ATRX-209ENST00000623242 EFCC1Q9HA90 598 aa6.46□□□□□ -1.38
ATRX-209ENST00000623242 LATS2Q9NRM7 1088 aa6.46□□□□□ -1.38
ATRX-209ENST00000623242 SALL4Q9UJQ4 1053 aa6.46□□□□□ -1.38
ATRX-209ENST00000623242 CCDC88BA6NC98 1476 aa6.46□□□□□ -1.38
ATRX-209ENST00000623242 KIF4AO95239 1232 aa6.45□□□□□ -1.38
ATRX-209ENST00000623242 ACPPP15309 386 aa6.45□□□□□ -1.38
ATRX-209ENST00000623242 SOX18P35713 384 aa6.45□□□□□ -1.38
ATRX-209ENST00000623242 PEAR1Q5VY43 1037 aaPredicted RBP6.45□□□□□ -1.38
ATRX-209ENST00000623242 FBF1Q8TES7 1133 aa6.45□□□□□ -1.38
ATRX-209ENST00000623242 MRRFQ96E11 262 aaKnown RBP6.45□□□□□ -1.38
ATRX-209ENST00000623242 NPHS2Q9NP85 383 aa6.45□□□□□ -1.38
ATRX-209ENST00000623242 MBIPQ9NS73 344 aa6.45□□□□□ -1.38
ATRX-209ENST00000623242 PRR12Q9ULL5 1215 aa6.45□□□□□ -1.38
ATRX-209ENST00000623242 SIN3BO75182 1162 aa6.44□□□□□ -1.38
ATRX-209ENST00000623242 PSAPP07602 524 aa6.44□□□□□ -1.38
ATRX-209ENST00000623242 DAB2P98082 770 aa6.44□□□□□ -1.38
ATRX-209ENST00000623242 ATP2B2Q01814 1243 aa6.44□□□□□ -1.38
ATRX-209ENST00000623242 MLLT1Q03111 559 aaPredicted RBP6.44□□□□□ -1.38
ATRX-209ENST00000623242 MRPL58Q14197 206 aaKnown RBP6.44□□□□□ -1.38
ATRX-209ENST00000623242 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.44□□□□□ -1.38
ATRX-209ENST00000623242 FCHSD1Q86WN1 690 aa6.44□□□□□ -1.38
ATRX-209ENST00000623242 TRPM4Q8TD43 1214 aa6.44□□□□□ -1.38
ATRX-209ENST00000623242 DNAJB12Q9NXW2 375 aaKnown RBP6.44□□□□□ -1.38
ATRX-209ENST00000623242 IGF1RP08069 1367 aa6.44□□□□□ -1.38
ATRX-209ENST00000623242 ARAFP10398 606 aa6.43□□□□□ -1.38
ATRX-209ENST00000623242 NRLP54845 237 aa6.43□□□□□ -1.38
ATRX-209ENST00000623242 LDLRAD1Q5T700 205 aa6.43□□□□□ -1.38
ATRX-209ENST00000623242 TMC4Q7Z404 712 aa6.43□□□□□ -1.38
ATRX-209ENST00000623242 PMEPA1Q969W9 287 aa6.43□□□□□ -1.38
ATRX-209ENST00000623242 NSUN5Q96P11 429 aaKnown RBP6.43□□□□□ -1.38
ATRX-209ENST00000623242 OSBPL7Q9BZF2 842 aa6.43□□□□□ -1.38
ATRX-209ENST00000623242 AVENQ9NQS1 362 aaPredicted RBP6.43□□□□□ -1.38
ATRX-209ENST00000623242 A0A1W2PP55 124 aa6.42□□□□□ -1.38
ATRX-209ENST00000623242 NEURL1BA8MQ27 555 aa6.42□□□□□ -1.38
ATRX-209ENST00000623242 PHF20L1A8MW92 1017 aa6.42□□□□□ -1.38
ATRX-209ENST00000623242 J3QW42 95 aa6.42□□□□□ -1.38
ATRX-209ENST00000623242 TRPA1O75762 1119 aa6.42□□□□□ -1.38
ATRX-209ENST00000623242 GNA15P30679 374 aa6.42□□□□□ -1.38
ATRX-209ENST00000623242 GPLD1P80108 840 aa6.42□□□□□ -1.38
ATRX-209ENST00000623242 PLAURQ03405 335 aa6.42□□□□□ -1.38
ATRX-209ENST00000623242 HFE2Q6ZVN8 426 aa6.42□□□□□ -1.38
ATRX-209ENST00000623242 SVOPQ8N4V2 548 aa6.42□□□□□ -1.38
ATRX-209ENST00000623242 CEP120Q8N960 986 aa6.42□□□□□ -1.38
ATRX-209ENST00000623242 TNFRSF25Q93038 417 aa6.42□□□□□ -1.38
ATRX-209ENST00000623242 IGFLR1Q9H665 355 aa6.42□□□□□ -1.38
ATRX-209ENST00000623242 NAGPAQ9UK23 515 aa6.42□□□□□ -1.38
ATRX-209ENST00000623242 LOC102724428A0A0B4J2F2 783 aa6.41□□□□□ -1.38
ATRX-209ENST00000623242 NFKBIEO00221 500 aa6.41□□□□□ -1.38
ATRX-209ENST00000623242 RECKO95980 971 aa6.41□□□□□ -1.38
ATRX-209ENST00000623242 VAMP1P23763 118 aa6.41□□□□□ -1.38
ATRX-209ENST00000623242 MAP2K3P46734 347 aa6.41□□□□□ -1.38
ATRX-209ENST00000623242 SIK1P57059 783 aa6.41□□□□□ -1.38
ATRX-209ENST00000623242 TBC1D8BQ0IIM8 1120 aa6.41□□□□□ -1.38
ATRX-209ENST00000623242 HYAL2Q12891 473 aa6.41□□□□□ -1.38
ATRX-209ENST00000623242 NEUROD1Q13562 356 aa6.41□□□□□ -1.38
ATRX-209ENST00000623242 KIAA0319Q5VV43 1072 aa6.41□□□□□ -1.38
ATRX-209ENST00000623242 C1orf229Q6ZS94 237 aaPredicted RBP6.41□□□□□ -1.38
ATRX-209ENST00000623242 GLIS3Q8NEA6 775 aa6.41□□□□□ -1.38
ATRX-209ENST00000623242 HHIPQ96QV1 700 aa6.41□□□□□ -1.38
ATRX-209ENST00000623242 UBE2OQ9C0C9 1292 aaKnown RBP6.41□□□□□ -1.38
ATRX-209ENST00000623242 GGA1Q9UJY5 639 aa6.41□□□□□ -1.38
ATRX-209ENST00000623242 SLC6A14Q9UN76 642 aa6.41□□□□□ -1.38
ATRX-209ENST00000623242 CADPSQ9ULU8 1353 aa6.41□□□□□ -1.38
ATRX-209ENST00000623242 ADARB2-AS1A8MUL3 147 aa6.4□□□□□ -1.38
ATRX-209ENST00000623242 E9PSI1 815 aa6.4□□□□□ -1.38
ATRX-209ENST00000623242 CTSHP09668 335 aa6.4□□□□□ -1.38
ATRX-209ENST00000623242 ADH6P28332 368 aa6.4□□□□□ -1.38
ATRX-209ENST00000623242 ADH7P40394 386 aa6.4□□□□□ -1.38
ATRX-209ENST00000623242 XPCQ01831 940 aaPredicted RBP6.4□□□□□ -1.38
ATRX-209ENST00000623242 SRSF11Q05519 484 aaKnown RBP6.4□□□□□ -1.38
ATRX-209ENST00000623242 PSMD2Q13200 908 aa6.4□□□□□ -1.38
ATRX-209ENST00000623242 GRM2Q14416 872 aa6.4□□□□□ -1.38
ATRX-209ENST00000623242 ACDQ96AP0 544 aa6.4□□□□□ -1.38
ATRX-209ENST00000623242 TCF12Q99081 682 aa6.4□□□□□ -1.38
ATRX-209ENST00000623242 ZKSCAN3Q9BRR0 538 aa6.4□□□□□ -1.38
ATRX-209ENST00000623242 SUV39H2Q9H5I1 410 aa6.4□□□□□ -1.38
ATRX-209ENST00000623242 AK5Q9Y6K8 562 aa6.4□□□□□ -1.38
ATRX-209ENST00000623242 GADD45BO75293 160 aaPredicted RBP6.39□□□□□ -1.39
ATRX-209ENST00000623242 ADAMTS2O95450 1211 aa6.39□□□□□ -1.39
ATRX-209ENST00000623242 SLURP2P0DP57 97 aa6.39□□□□□ -1.39
ATRX-209ENST00000623242 EDN3P14138 238 aa6.39□□□□□ -1.39
ATRX-209ENST00000623242 FGD1P98174 961 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms