RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 NUP188Q5SRE5 1749 aa14.22□□□□□ -0.13
TP53-227ENST00000622645 MSNP26038 577 aaKnown RBP14.21□□□□□ -0.13
TP53-227ENST00000622645 ATG3Q9NT62 314 aa14.21□□□□□ -0.13
TP53-227ENST00000622645 CEP126Q9P2H0 1117 aa14.21□□□□□ -0.13
TP53-227ENST00000622645 TJP1Q07157 1748 aa14.21□□□□□ -0.13
TP53-227ENST00000622645 PALLDQ8WX93 1383 aa14.21□□□□□ -0.13
TP53-227ENST00000622645 CIAO1O76071 339 aa14.21□□□□□ -0.13
TP53-227ENST00000622645 HSP90B1P14625 803 aaKnown RBP14.21□□□□□ -0.13
TP53-227ENST00000622645 CSPP1Q1MSJ5 1256 aa14.21□□□□□ -0.13
TP53-227ENST00000622645 GIMAP6Q6P9H5 292 aa14.21□□□□□ -0.13
TP53-227ENST00000622645 TTC6Q86TZ1 520 aa14.21□□□□□ -0.13
TP53-227ENST00000622645 SYNE4Q8N205 404 aa14.21□□□□□ -0.13
TP53-227ENST00000622645 BRF1Q92994 677 aa14.21□□□□□ -0.13
TP53-227ENST00000622645 BTG4Q9NY30 223 aa14.21□□□□□ -0.13
TP53-227ENST00000622645 FKBP4Q02790 459 aaKnown RBP eCLIP14.2□□□□□ -0.14
TP53-227ENST00000622645 HS1BP3Q53T59 392 aa14.2□□□□□ -0.14
TP53-227ENST00000622645 ZMYM1Q5SVZ6 1142 aa14.2□□□□□ -0.14
TP53-227ENST00000622645 GTF3C6Q969F1 213 aa14.2□□□□□ -0.14
TP53-227ENST00000622645 HELLSQ9NRZ9 838 aa14.2□□□□□ -0.14
TP53-227ENST00000622645 HCLS1P14317 486 aaPredicted RBP14.2□□□□□ -0.14
TP53-227ENST00000622645 ADORA1P30542 326 aa14.2□□□□□ -0.14
TP53-227ENST00000622645 KRT85P78386 507 aa14.2□□□□□ -0.14
TP53-227ENST00000622645 FGD1P98174 961 aa14.2□□□□□ -0.14
TP53-227ENST00000622645 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.2□□□□□ -0.14
TP53-227ENST00000622645 HSPD1P10809 573 aaKnown RBP14.19□□□□□ -0.14
TP53-227ENST00000622645 DDX11Q96FC9 970 aa14.19□□□□□ -0.14
TP53-227ENST00000622645 TFIP11Q9UBB9 837 aaKnown RBP14.19□□□□□ -0.14
TP53-227ENST00000622645 NOL7Q9UMY1 257 aaKnown RBP14.19□□□□□ -0.14
TP53-227ENST00000622645 SHANK3Q9BYB0 1731 aa14.19□□□□□ -0.14
TP53-227ENST00000622645 KIF6Q6ZMV9 814 aa14.19□□□□□ -0.14
TP53-227ENST00000622645 PAPPAQ13219 1627 aa14.19□□□□□ -0.14
TP53-227ENST00000622645 MAST3O60307 1309 aa14.19□□□□□ -0.14
TP53-227ENST00000622645 RNF113AO15541 343 aaKnown RBP14.18□□□□□ -0.14
TP53-227ENST00000622645 GPTP24298 496 aa14.18□□□□□ -0.14
TP53-227ENST00000622645 HLFQ16534 295 aa14.18□□□□□ -0.14
TP53-227ENST00000622645 GORABQ5T7V8 394 aa14.18□□□□□ -0.14
TP53-227ENST00000622645 LETM1O95202 739 aaPredicted RBP14.18□□□□□ -0.14
TP53-227ENST00000622645 PDIA4P13667 645 aaKnown RBP14.18□□□□□ -0.14
TP53-227ENST00000622645 SCRN1Q12765 414 aa14.18□□□□□ -0.14
TP53-227ENST00000622645 TRIM28Q13263 835 aaKnown RBP14.18□□□□□ -0.14
TP53-227ENST00000622645 XAGE2Q96GT9 111 aa14.18□□□□□ -0.14
TP53-227ENST00000622645 DSCC1Q9BVC3 393 aa14.18□□□□□ -0.14
TP53-227ENST00000622645 M0R2C6 588 aa14.18□□□□□ -0.14
TP53-227ENST00000622645 STARD3NLO95772 234 aa14.18□□□□□ -0.14
TP53-227ENST00000622645 PCCAP05165 728 aaPredicted RBP14.18□□□□□ -0.14
TP53-227ENST00000622645 TAF7LQ5H9L4 462 aa14.18□□□□□ -0.14
TP53-227ENST00000622645 TTLL5Q6EMB2 1281 aa14.18□□□□□ -0.14
TP53-227ENST00000622645 DHX32Q7L7V1 743 aaKnown RBP14.18□□□□□ -0.14
TP53-227ENST00000622645 OSBP2Q969R2 916 aa14.18□□□□□ -0.14
TP53-227ENST00000622645 STRCQ7RTU9 1775 aa14.17□□□□□ -0.14
TP53-227ENST00000622645 TOGARAM1Q9Y4F4 1720 aa14.17□□□□□ -0.14
TP53-227ENST00000622645 SCARF1Q14162 830 aa14.17□□□□□ -0.14
TP53-227ENST00000622645 CCDC158Q5M9N0 1113 aa14.17□□□□□ -0.14
TP53-227ENST00000622645 CHST3Q7LGC8 479 aa14.17□□□□□ -0.14
TP53-227ENST00000622645 VSIG10Q8N0Z9 540 aa14.17□□□□□ -0.14
TP53-227ENST00000622645 ZBTB38Q8NAP3 1195 aaPredicted RBP14.17□□□□□ -0.14
TP53-227ENST00000622645 FAM184AQ8NB25 1140 aa14.17□□□□□ -0.14
TP53-227ENST00000622645 TEX13AQ9BXU3 409 aaPredicted RBP14.17□□□□□ -0.14
TP53-227ENST00000622645 USP25Q9UHP3 1055 aa14.17□□□□□ -0.14
TP53-227ENST00000622645 APOBRQ0VD83 1088 aa14.17□□□□□ -0.14
TP53-227ENST00000622645 IFIT5Q13325 482 aaKnown RBP14.17□□□□□ -0.14
TP53-227ENST00000622645 TTC39AQ5SRH9 613 aa14.17□□□□□ -0.14
TP53-227ENST00000622645 FUCA2Q9BTY2 467 aa14.17□□□□□ -0.14
TP53-227ENST00000622645 ABCA3Q99758 1704 aa14.16□□□□□ -0.14
TP53-227ENST00000622645 E7EWF7 191 aa14.16□□□□□ -0.14
TP53-227ENST00000622645 PPFIA3O75145 1194 aa14.16□□□□□ -0.14
TP53-227ENST00000622645 HMGB1P09429 215 aaKnown RBP14.16□□□□□ -0.14
TP53-227ENST00000622645 PI16Q6UXB8 463 aa14.16□□□□□ -0.14
TP53-227ENST00000622645 MPNDQ8N594 471 aa14.16□□□□□ -0.14
TP53-227ENST00000622645 SLC4A9Q96Q91 983 aa14.16□□□□□ -0.14
TP53-227ENST00000622645 CSF1RP07333 972 aa14.16□□□□□ -0.14
TP53-227ENST00000622645 LIG1P18858 919 aa14.16□□□□□ -0.14
TP53-227ENST00000622645 GIGYF2Q6Y7W6 1299 aaKnown RBP14.16□□□□□ -0.14
TP53-227ENST00000622645 SYTL4Q96C24 671 aaPredicted RBP14.16□□□□□ -0.14
TP53-227ENST00000622645 AKAP2Q9Y2D5 859 aa14.16□□□□□ -0.14
TP53-227ENST00000622645 ZKSCAN5Q9Y2L8 839 aa14.16□□□□□ -0.14
TP53-227ENST00000622645 MAP3K15Q6ZN16 1313 aa14.15□□□□□ -0.14
TP53-227ENST00000622645 CCT2P78371 535 aaKnown RBP14.15□□□□□ -0.14
TP53-227ENST00000622645 EXOSC10Q01780 885 aaKnown RBP14.15□□□□□ -0.14
TP53-227ENST00000622645 HSP90AB3PQ58FF7 597 aa14.15□□□□□ -0.14
TP53-227ENST00000622645 SPATA32Q96LK8 384 aa14.15□□□□□ -0.14
TP53-227ENST00000622645 CCDC39Q9UFE4 941 aa14.15□□□□□ -0.14
TP53-227ENST00000622645 ELP1O95163 1332 aa14.15□□□□□ -0.14
TP53-227ENST00000622645 PFKFB2O60825 505 aa14.15□□□□□ -0.14
TP53-227ENST00000622645 CAMK4Q16566 473 aa14.15□□□□□ -0.14
TP53-227ENST00000622645 WASHC4Q2M389 1173 aa14.15□□□□□ -0.14
TP53-227ENST00000622645 NLRP10Q86W26 655 aa14.15□□□□□ -0.14
TP53-227ENST00000622645 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.15□□□□□ -0.14
TP53-227ENST00000622645 PLA2G12BQ9BX93 195 aa14.15□□□□□ -0.14
TP53-227ENST00000622645 SCAND2PQ9GZW5 306 aaPredicted RBP14.15□□□□□ -0.14
TP53-227ENST00000622645 GREM2Q9H772 168 aa14.15□□□□□ -0.14
TP53-227ENST00000622645 NAP1L2Q9ULW6 460 aaPredicted RBP14.15□□□□□ -0.14
TP53-227ENST00000622645 KDM4FA0A1W2PPD8 638 aa14.14□□□□□ -0.15
TP53-227ENST00000622645 H3BQV1 296 aa14.14□□□□□ -0.15
TP53-227ENST00000622645 PTMAP06454 111 aaKnown RBP14.14□□□□□ -0.15
TP53-227ENST00000622645 ZAP70P43403 619 aa14.14□□□□□ -0.15
TP53-227ENST00000622645 FOSBP53539 338 aa14.14□□□□□ -0.15
TP53-227ENST00000622645 UVSSAQ2YD98 709 aa14.14□□□□□ -0.15
TP53-227ENST00000622645 IFFO2Q5TF58 517 aa14.14□□□□□ -0.15
TP53-227ENST00000622645 LEO1Q8WVC0 666 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms