RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 GRM8O00222 908 aa20.99■□□□□ 0.95
FAM3A-222ENST00000621967 FAM177BA6PVY3 158 aa20.98■□□□□ 0.95
FAM3A-222ENST00000621967 UTYO14607 1347 aa20.98■□□□□ 0.95
FAM3A-222ENST00000621967 CARMIL3Q8ND23 1372 aa20.98■□□□□ 0.95
FAM3A-222ENST00000621967 NCLP19338 710 aaKnown RBP20.98■□□□□ 0.95
FAM3A-222ENST00000621967 NFIXQ14938 502 aa20.98■□□□□ 0.95
FAM3A-222ENST00000621967 MSL1Q68DK7 614 aa20.98■□□□□ 0.95
FAM3A-222ENST00000621967 TRIM44Q96DX7 344 aaPredicted RBP20.98■□□□□ 0.95
FAM3A-222ENST00000621967 PDGFDQ9GZP0 370 aaPredicted RBP20.98■□□□□ 0.95
FAM3A-222ENST00000621967 SNX14Q9Y5W7 946 aa20.98■□□□□ 0.95
FAM3A-222ENST00000621967 ERC1Q8IUD2 1116 aa20.97■□□□□ 0.95
FAM3A-222ENST00000621967 TTC14Q96N46 770 aa20.97■□□□□ 0.95
FAM3A-222ENST00000621967 TRMT112Q9UI30 125 aaKnown RBP20.97■□□□□ 0.95
FAM3A-222ENST00000621967 MBD3O95983 291 aa20.96■□□□□ 0.95
FAM3A-222ENST00000621967 SUSD4Q5VX71 490 aa20.96■□□□□ 0.95
FAM3A-222ENST00000621967 UBE3BQ7Z3V4 1068 aa20.96■□□□□ 0.95
FAM3A-222ENST00000621967 CLASRPQ8N2M8 674 aaKnown RBP20.96■□□□□ 0.95
FAM3A-222ENST00000621967 SLC16A10Q8TF71 515 aa20.96■□□□□ 0.95
FAM3A-222ENST00000621967 CHAMP1Q96JM3 812 aa20.96■□□□□ 0.95
FAM3A-222ENST00000621967 UTP14AQ9BVJ6 771 aaKnown RBP20.96■□□□□ 0.95
FAM3A-222ENST00000621967 COL24A1Q17RW2 1714 aa20.96■□□□□ 0.95
FAM3A-222ENST00000621967 PSDA5PKW4 1024 aaPredicted RBP20.96■□□□□ 0.95
FAM3A-222ENST00000621967 NPHP1O15259 732 aa20.95■□□□□ 0.94
FAM3A-222ENST00000621967 OS9Q13438 667 aaPredicted RBP20.95■□□□□ 0.94
FAM3A-222ENST00000621967 NOL8Q76FK4 1167 aaKnown RBP20.95■□□□□ 0.94
FAM3A-222ENST00000621967 NBPF5PQ86XG9 351 aaPredicted RBP20.95■□□□□ 0.94
FAM3A-222ENST00000621967 ZBTB38Q8NAP3 1195 aaPredicted RBP20.95■□□□□ 0.94
FAM3A-222ENST00000621967 TMEM63CQ9P1W3 806 aa20.95■□□□□ 0.94
FAM3A-222ENST00000621967 JARID2Q92833 1246 aaPredicted RBP20.94■□□□□ 0.94
FAM3A-222ENST00000621967 NYXQ9GZU5 481 aa20.94■□□□□ 0.94
FAM3A-222ENST00000621967 ECHDC1Q9NTX5 307 aa20.94■□□□□ 0.94
FAM3A-222ENST00000621967 RBM27Q9P2N5 1060 aaKnown RBP20.94■□□□□ 0.94
FAM3A-222ENST00000621967 CASZ1Q86V15 1759 aa20.94■□□□□ 0.94
FAM3A-222ENST00000621967 SOCS7O14512 581 aa20.94■□□□□ 0.94
FAM3A-222ENST00000621967 PCCAP05165 728 aaPredicted RBP20.94■□□□□ 0.94
FAM3A-222ENST00000621967 GTF2E1P29083 439 aaPredicted RBP20.94■□□□□ 0.94
FAM3A-222ENST00000621967 FAM89AQ96GI7 184 aa20.94■□□□□ 0.94
FAM3A-222ENST00000621967 SH3TC1Q8TE82 1336 aa20.93■□□□□ 0.94
FAM3A-222ENST00000621967 NTSR2O95665 410 aa20.93■□□□□ 0.94
FAM3A-222ENST00000621967 TM4SF1P30408 202 aa20.93■□□□□ 0.94
FAM3A-222ENST00000621967 FOXD4L5Q5VV16 416 aaPredicted RBP20.93■□□□□ 0.94
FAM3A-222ENST00000621967 RASEFQ8IZ41 740 aa20.93■□□□□ 0.94
FAM3A-222ENST00000621967 FOXD4L4Q8WXT5 416 aaPredicted RBP20.93■□□□□ 0.94
FAM3A-222ENST00000621967 ANP32BQ92688 251 aaKnown RBP20.93■□□□□ 0.94
FAM3A-222ENST00000621967 KAZALD1Q96I82 304 aa20.93■□□□□ 0.94
FAM3A-222ENST00000621967 NSFL1CQ9UNZ2 370 aaKnown RBP20.93■□□□□ 0.94
FAM3A-222ENST00000621967 RPAP1Q9BWH6 1393 aaPredicted RBP20.92■□□□□ 0.94
FAM3A-222ENST00000621967 WDR33Q9C0J8 1336 aaKnown RBP20.92■□□□□ 0.94
FAM3A-222ENST00000621967 H7C1W4 665 aa20.92■□□□□ 0.94
FAM3A-222ENST00000621967 MMP10P09238 476 aa20.92■□□□□ 0.94
FAM3A-222ENST00000621967 LRSAM1Q6UWE0 723 aa20.92■□□□□ 0.94
FAM3A-222ENST00000621967 CWC27Q6UX04 472 aaKnown RBP20.92■□□□□ 0.94
FAM3A-222ENST00000621967 TPTE2Q6XPS3 522 aa20.92■□□□□ 0.94
FAM3A-222ENST00000621967 KIAA1211Q6ZU35 1233 aa20.92■□□□□ 0.94
FAM3A-222ENST00000621967 RUFY2Q8WXA3 655 aa20.92■□□□□ 0.94
FAM3A-222ENST00000621967 GPATCH3Q96I76 525 aa20.92■□□□□ 0.94
FAM3A-222ENST00000621967 RBSNQ9H1K0 784 aa20.92■□□□□ 0.94
FAM3A-222ENST00000621967 DDR1Q08345 913 aa20.92■□□□□ 0.94
FAM3A-222ENST00000621967 KCNB2Q92953 911 aa20.92■□□□□ 0.94
FAM3A-222ENST00000621967 ZBTB7AO95365 584 aa20.91■□□□□ 0.94
FAM3A-222ENST00000621967 CNBD1Q8NA66 436 aa20.91■□□□□ 0.94
FAM3A-222ENST00000621967 SUCLG2Q96I99 432 aa20.91■□□□□ 0.94
FAM3A-222ENST00000621967 PA2G4Q9UQ80 394 aaKnown RBP20.91■□□□□ 0.94
FAM3A-222ENST00000621967 PARP3Q9Y6F1 533 aa20.91■□□□□ 0.94
FAM3A-222ENST00000621967 POLRMTO00411 1230 aaKnown RBP20.9■□□□□ 0.94
FAM3A-222ENST00000621967 SERPINB2P05120 415 aa20.9■□□□□ 0.94
FAM3A-222ENST00000621967 DIAPH3Q9NSV4 1193 aa20.9■□□□□ 0.94
FAM3A-222ENST00000621967 CDHR2Q9BYE9 1310 aa20.9■□□□□ 0.94
FAM3A-222ENST00000621967 AK2P54819 239 aa20.9■□□□□ 0.94
FAM3A-222ENST00000621967 CASP7P55210 303 aa20.9■□□□□ 0.94
FAM3A-222ENST00000621967 MTFR1LQ9H019 292 aa20.9■□□□□ 0.94
FAM3A-222ENST00000621967 IRS4O14654 1257 aaPredicted RBP20.89■□□□□ 0.93
FAM3A-222ENST00000621967 IFIT2P09913 472 aaKnown RBP20.89■□□□□ 0.93
FAM3A-222ENST00000621967 HSP90B1P14625 803 aaKnown RBP20.89■□□□□ 0.93
FAM3A-222ENST00000621967 SYNE4Q8N205 404 aa20.89■□□□□ 0.93
FAM3A-222ENST00000621967 EVI5LQ96CN4 794 aa20.89■□□□□ 0.93
FAM3A-222ENST00000621967 PDLIM2Q96JY6 352 aa20.89■□□□□ 0.93
FAM3A-222ENST00000621967 SASH1O94885 1247 aa20.88■□□□□ 0.93
FAM3A-222ENST00000621967 ERFEQ4G0M1 354 aa20.88■□□□□ 0.93
FAM3A-222ENST00000621967 RUFY3Q7L099 469 aa20.88■□□□□ 0.93
FAM3A-222ENST00000621967 BICC1Q9H694 974 aaKnown RBP20.88■□□□□ 0.93
FAM3A-222ENST00000621967 LIMCH1Q9UPQ0 1083 aa20.88■□□□□ 0.93
FAM3A-222ENST00000621967 ST5P78524 1137 aa20.88■□□□□ 0.93
FAM3A-222ENST00000621967 TMEM87AQ8NBN3 555 aa20.88■□□□□ 0.93
FAM3A-222ENST00000621967 TM6SF1Q9BZW5 370 aa20.88■□□□□ 0.93
FAM3A-222ENST00000621967 PRR5LQ6MZQ0 368 aa20.87■□□□□ 0.93
FAM3A-222ENST00000621967 AACSQ86V21 672 aa20.87■□□□□ 0.93
FAM3A-222ENST00000621967 SNRKQ9NRH2 765 aa20.87■□□□□ 0.93
FAM3A-222ENST00000621967 SYCE3A1L190 88 aa20.86■□□□□ 0.93
FAM3A-222ENST00000621967 HCLS1P14317 486 aaPredicted RBP20.86■□□□□ 0.93
FAM3A-222ENST00000621967 PTH1RQ03431 593 aa20.86■□□□□ 0.93
FAM3A-222ENST00000621967 HS1BP3Q53T59 392 aa20.86■□□□□ 0.93
FAM3A-222ENST00000621967 ATF5Q9Y2D1 282 aaPredicted RBP20.86■□□□□ 0.93
FAM3A-222ENST00000621967 ABCC12Q96J65 1359 aa20.86■□□□□ 0.93
FAM3A-222ENST00000621967 LAMB2P55268 1798 aa20.86■□□□□ 0.93
FAM3A-222ENST00000621967 CCDC24Q8N4L8 307 aa20.86■□□□□ 0.93
FAM3A-222ENST00000621967 POLD1P28340 1107 aa20.85■□□□□ 0.93
FAM3A-222ENST00000621967 VPS53Q5VIR6 699 aa20.85■□□□□ 0.93
FAM3A-222ENST00000621967 ZSCAN30Q86W11 494 aa20.85■□□□□ 0.93
FAM3A-222ENST00000621967 EAF2Q96CJ1 260 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms