RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 EYA3Q99504 573 aa20.36■□□□□ 0.85
SNHG28-203ENST00000621242 CHPF2Q9P2E5 772 aa20.36■□□□□ 0.85
SNHG28-203ENST00000621242 ASTN2O75129 1339 aaPredicted RBP20.35■□□□□ 0.85
SNHG28-203ENST00000621242 ATP5J2-PTCD1G3V325 749 aa20.35■□□□□ 0.85
SNHG28-203ENST00000621242 TMPOP42166 694 aaKnown RBP20.35■□□□□ 0.85
SNHG28-203ENST00000621242 RTL5Q5HYW3 569 aaPredicted RBP20.35■□□□□ 0.85
SNHG28-203ENST00000621242 SULF1Q8IWU6 871 aa20.35■□□□□ 0.85
SNHG28-203ENST00000621242 TBC1D16Q8TBP0 767 aa20.35■□□□□ 0.85
SNHG28-203ENST00000621242 ISCA1Q9BUE6 129 aa20.35■□□□□ 0.85
SNHG28-203ENST00000621242 GGA3Q9NZ52 723 aa20.35■□□□□ 0.85
SNHG28-203ENST00000621242 ANKRD13DQ6ZTN6 518 aa20.34■□□□□ 0.85
SNHG28-203ENST00000621242 PLBD2Q8NHP8 589 aa20.34■□□□□ 0.85
SNHG28-203ENST00000621242 CDCA5Q96FF9 252 aa20.34■□□□□ 0.85
SNHG28-203ENST00000621242 VIL1P09327 827 aaKnown RBP20.33■□□□□ 0.85
SNHG28-203ENST00000621242 LMOD3Q0VAK6 560 aa20.33■□□□□ 0.85
SNHG28-203ENST00000621242 CTU1Q7Z7A3 348 aaKnown RBP20.33■□□□□ 0.85
SNHG28-203ENST00000621242 ZC3H12CQ9C0D7 883 aaKnown RBP20.33■□□□□ 0.85
SNHG28-203ENST00000621242 PSME4Q14997 1843 aa20.32■□□□□ 0.84
SNHG28-203ENST00000621242 RPS8P62241 208 aaKnown RBP20.32■□□□□ 0.84
SNHG28-203ENST00000621242 CHL1O00533 1208 aa20.31■□□□□ 0.84
SNHG28-203ENST00000621242 IRS4O14654 1257 aaPredicted RBP20.31■□□□□ 0.84
SNHG28-203ENST00000621242 ZEB1P37275 1124 aaPredicted RBP20.31■□□□□ 0.84
SNHG28-203ENST00000621242 NEUROD2Q15784 382 aa20.31■□□□□ 0.84
SNHG28-203ENST00000621242 HDGFL1Q5TGJ6 251 aa20.31■□□□□ 0.84
SNHG28-203ENST00000621242 LAS1LQ9Y4W2 734 aaKnown RBP20.31■□□□□ 0.84
SNHG28-203ENST00000621242 G3V3G9 751 aa20.3■□□□□ 0.84
SNHG28-203ENST00000621242 SCARF1Q14162 830 aa20.3■□□□□ 0.84
SNHG28-203ENST00000621242 DCAF8Q5TAQ9 597 aa20.3■□□□□ 0.84
SNHG28-203ENST00000621242 ANGEL2Q5VTE6 544 aaKnown RBP20.3■□□□□ 0.84
SNHG28-203ENST00000621242 RASAL3Q86YV0 1011 aa20.3■□□□□ 0.84
SNHG28-203ENST00000621242 REM2Q8IYK8 340 aaPredicted RBP20.29■□□□□ 0.84
SNHG28-203ENST00000621242 SEC31BQ9NQW1 1179 aa20.29■□□□□ 0.84
SNHG28-203ENST00000621242 PODXL2Q9NZ53 605 aa20.29■□□□□ 0.84
SNHG28-203ENST00000621242 DBF4Q9UBU7 674 aaPredicted RBP20.29■□□□□ 0.84
SNHG28-203ENST00000621242 UFL1O94874 794 aa20.28■□□□□ 0.84
SNHG28-203ENST00000621242 ZNF280AP59817 542 aaPredicted RBP20.28■□□□□ 0.84
SNHG28-203ENST00000621242 ANKIB1Q9P2G1 1089 aa20.28■□□□□ 0.84
SNHG28-203ENST00000621242 PAPPA2Q9BXP8 1791 aa20.28■□□□□ 0.84
SNHG28-203ENST00000621242 TRIM28Q13263 835 aaKnown RBP20.27■□□□□ 0.84
SNHG28-203ENST00000621242 RSBN1LQ6PCB5 846 aaPredicted RBP20.27■□□□□ 0.84
SNHG28-203ENST00000621242 AGBL3Q8NEM8 1001 aa20.27■□□□□ 0.84
SNHG28-203ENST00000621242 HPS5Q9UPZ3 1129 aa20.27■□□□□ 0.84
SNHG28-203ENST00000621242 PRPF38BQ5VTL8 546 aaKnown RBP20.26■□□□□ 0.83
SNHG28-203ENST00000621242 MOB2Q70IA6 237 aa20.26■□□□□ 0.83
SNHG28-203ENST00000621242 CCDC146Q8IYE0 955 aa20.26■□□□□ 0.83
SNHG28-203ENST00000621242 GGA1Q9UJY5 639 aa20.26■□□□□ 0.83
SNHG28-203ENST00000621242 SCAF8Q9UPN6 1271 aaKnown RBP20.26■□□□□ 0.83
SNHG28-203ENST00000621242 HOXB7P09629 217 aa20.25■□□□□ 0.83
SNHG28-203ENST00000621242 FKBP1BP68106 108 aa20.25■□□□□ 0.83
SNHG28-203ENST00000621242 MYOZ2Q9NPC6 264 aa20.25■□□□□ 0.83
SNHG28-203ENST00000621242 HYPKQ9NX55 129 aa20.25■□□□□ 0.83
SNHG28-203ENST00000621242 TRIM35Q9UPQ4 493 aa20.25■□□□□ 0.83
SNHG28-203ENST00000621242 ZNF609O15014 1411 aa20.25■□□□□ 0.83
SNHG28-203ENST00000621242 TBC1D8O95759 1140 aa20.24■□□□□ 0.83
SNHG28-203ENST00000621242 ZBTB38Q8NAP3 1195 aaPredicted RBP20.24■□□□□ 0.83
SNHG28-203ENST00000621242 GMLQ99445 158 aa20.24■□□□□ 0.83
SNHG28-203ENST00000621242 HDAC9Q9UKV0 1011 aa20.24■□□□□ 0.83
SNHG28-203ENST00000621242 UBE2Q2LH0YL09 131 aa20.23■□□□□ 0.83
SNHG28-203ENST00000621242 USP17L8P0C7I0 530 aa20.23■□□□□ 0.83
SNHG28-203ENST00000621242 RIC3Q7Z5B4 369 aa20.23■□□□□ 0.83
SNHG28-203ENST00000621242 ZNF296Q8WUU4 475 aaPredicted RBP20.23■□□□□ 0.83
SNHG28-203ENST00000621242 PITPNM2Q9BZ72 1349 aa20.23■□□□□ 0.83
SNHG28-203ENST00000621242 PKN2Q16513 984 aaKnown RBP20.22■□□□□ 0.83
SNHG28-203ENST00000621242 PRAMEF18Q5VWM3 479 aa20.22■□□□□ 0.83
SNHG28-203ENST00000621242 CCDC85AQ96PX6 553 aaPredicted RBP20.22■□□□□ 0.83
SNHG28-203ENST00000621242 DUSP27Q5VZP5 1158 aa20.21■□□□□ 0.83
SNHG28-203ENST00000621242 USP17L3A6NCW0 530 aa20.2■□□□□ 0.82
SNHG28-203ENST00000621242 USP17L4A6NCW7 530 aa20.2■□□□□ 0.82
SNHG28-203ENST00000621242 HSP90B1P14625 803 aaKnown RBP20.2■□□□□ 0.82
SNHG28-203ENST00000621242 CCDC152Q4G0S7 254 aa20.2■□□□□ 0.82
SNHG28-203ENST00000621242 USP17L1Q7RTZ2 530 aa20.2■□□□□ 0.82
SNHG28-203ENST00000621242 JARID2Q92833 1246 aaPredicted RBP20.2■□□□□ 0.82
SNHG28-203ENST00000621242 MYD88Q99836 296 aa20.2■□□□□ 0.82
SNHG28-203ENST00000621242 PHAXQ9H814 394 aaKnown RBP20.2■□□□□ 0.82
SNHG28-203ENST00000621242 XDHP47989 1333 aa20.2■□□□□ 0.82
SNHG28-203ENST00000621242 GOLGA2Q08379 1002 aa20.19■□□□□ 0.82
SNHG28-203ENST00000621242 NBPF9Q3BBW0 867 aa20.19■□□□□ 0.82
SNHG28-203ENST00000621242 PODNQ7Z5L7 613 aa20.19■□□□□ 0.82
SNHG28-203ENST00000621242 ZNF646O15015 1829 aaPredicted RBP20.18■□□□□ 0.82
SNHG28-203ENST00000621242 SPEF2Q9C093 1822 aa20.18■□□□□ 0.82
SNHG28-203ENST00000621242 WTIPA6NIX2 430 aaPredicted RBP20.18■□□□□ 0.82
SNHG28-203ENST00000621242 PDE8AO60658 829 aa20.18■□□□□ 0.82
SNHG28-203ENST00000621242 PCCAP05165 728 aaPredicted RBP20.18■□□□□ 0.82
SNHG28-203ENST00000621242 TM4SF4P48230 202 aa20.18■□□□□ 0.82
SNHG28-203ENST00000621242 TTLL12Q14166 644 aaPredicted RBP20.18■□□□□ 0.82
SNHG28-203ENST00000621242 RALBP1Q15311 655 aa20.18■□□□□ 0.82
SNHG28-203ENST00000621242 ANKRD18AQ8IVF6 992 aa20.18■□□□□ 0.82
SNHG28-203ENST00000621242 RUNDC1Q96C34 613 aa20.18■□□□□ 0.82
SNHG28-203ENST00000621242 GPR25O00155 361 aa20.17■□□□□ 0.82
SNHG28-203ENST00000621242 ATP2B4P23634 1241 aa20.17■□□□□ 0.82
SNHG28-203ENST00000621242 MKRN3Q13064 507 aaKnown RBP20.17■□□□□ 0.82
SNHG28-203ENST00000621242 CCDC191Q8NCU4 936 aa20.17■□□□□ 0.82
SNHG28-203ENST00000621242 MYH3P11055 1940 aa20.16■□□□□ 0.82
SNHG28-203ENST00000621242 MXD3Q9BW11 206 aa20.16■□□□□ 0.82
SNHG28-203ENST00000621242 MBIPQ9NS73 344 aa20.16■□□□□ 0.82
SNHG28-203ENST00000621242 FBXO46Q6PJ61 603 aaPredicted RBP20.15■□□□□ 0.82
SNHG28-203ENST00000621242 CWC25Q9NXE8 425 aaPredicted RBP20.15■□□□□ 0.82
SNHG28-203ENST00000621242 WNT10BO00744 389 aa20.14■□□□□ 0.81
SNHG28-203ENST00000621242 NOM1Q5C9Z4 860 aaKnown RBP20.14■□□□□ 0.81
SNHG28-203ENST00000621242 DACT2Q5SW24 774 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms