RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 FBXO3Q9UK99 471 aa19.38■□□□□ 0.69
PCDHGC3-204ENST00000617222 NOP58Q9Y2X3 529 aaKnown RBP19.38■□□□□ 0.69
PCDHGC3-204ENST00000617222 SLX4Q8IY92 1834 aa19.37■□□□□ 0.69
PCDHGC3-204ENST00000617222 CIAO1O76071 339 aa19.37■□□□□ 0.69
PCDHGC3-204ENST00000617222 YBX3P16989 372 aaKnown RBP eCLIP19.37■□□□□ 0.69
PCDHGC3-204ENST00000617222 GPSM2P81274 684 aa19.37■□□□□ 0.69
PCDHGC3-204ENST00000617222 GPR162Q16538 588 aa19.37■□□□□ 0.69
PCDHGC3-204ENST00000617222 CCDC93Q567U6 631 aa19.37■□□□□ 0.69
PCDHGC3-204ENST00000617222 NSFL1CQ9UNZ2 370 aaKnown RBP19.37■□□□□ 0.69
PCDHGC3-204ENST00000617222 IL15P40933 162 aaPredicted RBP19.36■□□□□ 0.69
PCDHGC3-204ENST00000617222 OS9Q13438 667 aaPredicted RBP19.36■□□□□ 0.69
PCDHGC3-204ENST00000617222 METTL24Q5JXM2 366 aa19.36■□□□□ 0.69
PCDHGC3-204ENST00000617222 SOGA3Q5TF21 947 aa19.36■□□□□ 0.69
PCDHGC3-204ENST00000617222 MPNDQ8N594 471 aa19.36■□□□□ 0.69
PCDHGC3-204ENST00000617222 ANKRD2Q9GZV1 360 aa19.36■□□□□ 0.69
PCDHGC3-204ENST00000617222 RWDD1Q9H446 243 aaPredicted RBP19.36■□□□□ 0.69
PCDHGC3-204ENST00000617222 ANKIB1Q9P2G1 1089 aa19.36■□□□□ 0.69
PCDHGC3-204ENST00000617222 EXOC6BQ9Y2D4 811 aa19.36■□□□□ 0.69
PCDHGC3-204ENST00000617222 DLEC1Q9Y238 1755 aa19.36■□□□□ 0.69
PCDHGC3-204ENST00000617222 MROH5Q6ZUA9 1318 aa19.35■□□□□ 0.69
PCDHGC3-204ENST00000617222 TAF5LO75529 589 aa19.35■□□□□ 0.69
PCDHGC3-204ENST00000617222 HDAC1Q13547 482 aaPredicted RBP19.35■□□□□ 0.69
PCDHGC3-204ENST00000617222 RTKN2Q8IZC4 609 aa19.35■□□□□ 0.69
PCDHGC3-204ENST00000617222 DCTPP1Q9H773 170 aa19.35■□□□□ 0.69
PCDHGC3-204ENST00000617222 IGHDP01880 384 aa19.34■□□□□ 0.69
PCDHGC3-204ENST00000617222 HSP90AB4PQ58FF6 505 aa19.34■□□□□ 0.69
PCDHGC3-204ENST00000617222 DPP8Q6V1X1 898 aaPredicted RBP19.34■□□□□ 0.69
PCDHGC3-204ENST00000617222 ARHGAP27Q6ZUM4 889 aa19.34■□□□□ 0.69
PCDHGC3-204ENST00000617222 CEP126Q9P2H0 1117 aa19.34■□□□□ 0.69
PCDHGC3-204ENST00000617222 XDHP47989 1333 aa19.33■□□□□ 0.69
PCDHGC3-204ENST00000617222 APBB1O00213 710 aa19.33■□□□□ 0.68
PCDHGC3-204ENST00000617222 GRIPAP1Q4V328 841 aa19.33■□□□□ 0.68
PCDHGC3-204ENST00000617222 ERICH6BQ5W0A0 696 aa19.33■□□□□ 0.68
PCDHGC3-204ENST00000617222 PODXL2Q9NZ53 605 aa19.33■□□□□ 0.68
PCDHGC3-204ENST00000617222 GGA1Q9UJY5 639 aa19.33■□□□□ 0.68
PCDHGC3-204ENST00000617222 SRCAPQ6ZRS2 3230 aa19.33■□□□□ 0.68
PCDHGC3-204ENST00000617222 WTIPA6NIX2 430 aaPredicted RBP19.32■□□□□ 0.68
PCDHGC3-204ENST00000617222 SNAP23O00161 211 aa19.32■□□□□ 0.68
PCDHGC3-204ENST00000617222 SASH1O94885 1247 aa19.32■□□□□ 0.68
PCDHGC3-204ENST00000617222 ATP2B4P23634 1241 aa19.32■□□□□ 0.68
PCDHGC3-204ENST00000617222 TFCP2Q12800 502 aa19.32■□□□□ 0.68
PCDHGC3-204ENST00000617222 POLLQ9UGP5 575 aa19.32■□□□□ 0.68
PCDHGC3-204ENST00000617222 BRCA1P38398 1863 aaKnown RBP19.31■□□□□ 0.68
PCDHGC3-204ENST00000617222 C6orf229H3BNL8 230 aa19.31■□□□□ 0.68
PCDHGC3-204ENST00000617222 RAB11FIP3O75154 756 aa19.31■□□□□ 0.68
PCDHGC3-204ENST00000617222 UFL1O94874 794 aa19.31■□□□□ 0.68
PCDHGC3-204ENST00000617222 PDE8BO95263 885 aa19.31■□□□□ 0.68
PCDHGC3-204ENST00000617222 KCNJ4P48050 445 aa19.31■□□□□ 0.68
PCDHGC3-204ENST00000617222 VGLL2Q8N8G2 317 aa19.31■□□□□ 0.68
PCDHGC3-204ENST00000617222 TBC1D16Q8TBP0 767 aa19.31■□□□□ 0.68
PCDHGC3-204ENST00000617222 LEMD3Q9Y2U8 911 aa19.31■□□□□ 0.68
PCDHGC3-204ENST00000617222 GRIN3BO60391 1043 aa19.3■□□□□ 0.68
PCDHGC3-204ENST00000617222 FKBP4Q02790 459 aaKnown RBP eCLIP19.3■□□□□ 0.68
PCDHGC3-204ENST00000617222 ERC1Q8IUD2 1116 aa19.3■□□□□ 0.68
PCDHGC3-204ENST00000617222 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.3■□□□□ 0.68
PCDHGC3-204ENST00000617222 ZNF804BA4D1E1 1349 aa19.29■□□□□ 0.68
PCDHGC3-204ENST00000617222 CACNA1SQ13698 1873 aa19.29■□□□□ 0.68
PCDHGC3-204ENST00000617222 NFKBIEO00221 500 aa19.29■□□□□ 0.68
PCDHGC3-204ENST00000617222 RHPN1Q8TCX5 695 aa19.29■□□□□ 0.68
PCDHGC3-204ENST00000617222 GPR101Q96P66 508 aaPredicted RBP19.29■□□□□ 0.68
PCDHGC3-204ENST00000617222 PSMD1Q99460 953 aa19.29■□□□□ 0.68
PCDHGC3-204ENST00000617222 RTFDC1Q9BY42 306 aaPredicted RBP19.29■□□□□ 0.68
PCDHGC3-204ENST00000617222 BCL11AQ9H165 835 aa19.29■□□□□ 0.68
PCDHGC3-204ENST00000617222 TAOK3Q9H2K8 898 aa19.29■□□□□ 0.68
PCDHGC3-204ENST00000617222 SNED1Q8TER0 1413 aa19.28■□□□□ 0.68
PCDHGC3-204ENST00000617222 DCAF8L1A6NGE4 600 aa19.28■□□□□ 0.68
PCDHGC3-204ENST00000617222 RASSF7Q02833 373 aa19.28■□□□□ 0.68
PCDHGC3-204ENST00000617222 UBE4AQ14139 1066 aa19.28■□□□□ 0.68
PCDHGC3-204ENST00000617222 SUPT20HQ8NEM7 779 aa19.28■□□□□ 0.68
PCDHGC3-204ENST00000617222 GCC1Q96CN9 775 aa19.28■□□□□ 0.68
PCDHGC3-204ENST00000617222 KIF1BPQ96EK5 621 aa19.28■□□□□ 0.68
PCDHGC3-204ENST00000617222 ZNF277Q9NRM2 450 aaPredicted RBP19.28■□□□□ 0.68
PCDHGC3-204ENST00000617222 SPEF2Q9C093 1822 aa19.28■□□□□ 0.68
PCDHGC3-204ENST00000617222 RIMBP2O15034 1052 aa19.27■□□□□ 0.68
PCDHGC3-204ENST00000617222 PUM3Q15397 648 aaKnown RBP19.27■□□□□ 0.68
PCDHGC3-204ENST00000617222 ATP2B3Q16720 1220 aa19.27■□□□□ 0.68
PCDHGC3-204ENST00000617222 CCDC136Q96JN2 1154 aa19.27■□□□□ 0.68
PCDHGC3-204ENST00000617222 IL1RAPL2Q9NP60 686 aa19.27■□□□□ 0.68
PCDHGC3-204ENST00000617222 PPP4R2Q9NY27 417 aa19.27■□□□□ 0.68
PCDHGC3-204ENST00000617222 AKAP2Q9Y2D5 859 aa19.27■□□□□ 0.68
PCDHGC3-204ENST00000617222 SMARCA5O60264 1052 aaPredicted RBP19.26■□□□□ 0.67
PCDHGC3-204ENST00000617222 FGFR2P21802 821 aa19.26■□□□□ 0.67
PCDHGC3-204ENST00000617222 TIMM10P62072 90 aa19.26■□□□□ 0.67
PCDHGC3-204ENST00000617222 WASHC4Q2M389 1173 aa19.26■□□□□ 0.67
PCDHGC3-204ENST00000617222 SMC5Q8IY18 1101 aa19.26■□□□□ 0.67
PCDHGC3-204ENST00000617222 LPIN2Q92539 896 aa19.26■□□□□ 0.67
PCDHGC3-204ENST00000617222 EYA3Q99504 573 aa19.26■□□□□ 0.67
PCDHGC3-204ENST00000617222 LRRCC1Q9C099 1032 aa19.26■□□□□ 0.67
PCDHGC3-204ENST00000617222 IFIT1P09914 478 aaKnown RBP19.25■□□□□ 0.67
PCDHGC3-204ENST00000617222 SLC5A1P13866 664 aa19.25■□□□□ 0.67
PCDHGC3-204ENST00000617222 KLRK1P26718 216 aa19.25■□□□□ 0.67
PCDHGC3-204ENST00000617222 ANKRD45Q5TZF3 282 aa19.25■□□□□ 0.67
PCDHGC3-204ENST00000617222 B4GALNT3Q6L9W6 998 aa19.25■□□□□ 0.67
PCDHGC3-204ENST00000617222 TXNRD3Q86VQ6 643 aa19.25■□□□□ 0.67
PCDHGC3-204ENST00000617222 NEUROD6Q96NK8 337 aa19.25■□□□□ 0.67
PCDHGC3-204ENST00000617222 ZC3H12CQ9C0D7 883 aaKnown RBP19.25■□□□□ 0.67
PCDHGC3-204ENST00000617222 GPR108Q9NPR9 543 aa19.25■□□□□ 0.67
PCDHGC3-204ENST00000617222 LRRC37AA6NMS7 1700 aa19.25■□□□□ 0.67
PCDHGC3-204ENST00000617222 LTBP3Q9NS15 1303 aa19.25■□□□□ 0.67
PCDHGC3-204ENST00000617222 A0A1B0GUL7 405 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms