RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, humanhuman

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-216ENST00000616614 RFX5P48382 616 aaPredicted RBP39.87■■■■□ 3.97
FMR1-216ENST00000616614 TBC1D16Q8TBP0 767 aa39.87■■■■□ 3.97
FMR1-216ENST00000616614 HDAC5Q9UQL6 1122 aa39.87■■■■□ 3.97
FMR1-216ENST00000616614 GNAI2P04899 355 aa39.86■■■■□ 3.97
FMR1-216ENST00000616614 MVPQ14764 893 aaKnown RBP39.86■■■■□ 3.97
FMR1-216ENST00000616614 TAF7LQ5H9L4 462 aa39.86■■■■□ 3.97
FMR1-216ENST00000616614 GPR101Q96P66 508 aaPredicted RBP39.86■■■■□ 3.97
FMR1-216ENST00000616614 PUS3Q9BZE2 481 aaKnown RBP39.86■■■■□ 3.97
FMR1-216ENST00000616614 ANKIB1Q9P2G1 1089 aa39.86■■■■□ 3.97
FMR1-216ENST00000616614 LTBP1Q14766 1721 aa39.86■■■■□ 3.97
FMR1-216ENST00000616614 COL4A5P29400 1685 aa39.86■■■■□ 3.97
FMR1-216ENST00000616614 PDE3AQ14432 1141 aa39.85■■■■□ 3.97
FMR1-216ENST00000616614 AOC3Q16853 763 aa39.84■■■■□ 3.97
FMR1-216ENST00000616614 LDHAL6AQ6ZMR3 332 aa39.84■■■■□ 3.97
FMR1-216ENST00000616614 SUPT20HQ8NEM7 779 aa39.84■■■■□ 3.97
FMR1-216ENST00000616614 C1orf115Q9H7X2 142 aa39.83■■■■□ 3.97
FMR1-216ENST00000616614 SPEF2Q9C093 1822 aa39.83■■■■□ 3.97
FMR1-216ENST00000616614 XDHP47989 1333 aa39.83■■■■□ 3.97
FMR1-216ENST00000616614 C6orf229H3BNL8 230 aa39.82■■■■□ 3.97
FMR1-216ENST00000616614 RRP1P56182 461 aaKnown RBP39.82■■■■□ 3.97
FMR1-216ENST00000616614 CHRNDQ07001 517 aa39.82■■■■□ 3.97
FMR1-216ENST00000616614 PPIP5K2O43314 1243 aa39.81■■■■□ 3.96
FMR1-216ENST00000616614 UFL1O94874 794 aa39.81■■■■□ 3.96
FMR1-216ENST00000616614 PTPN12Q05209 780 aaKnown RBP39.81■■■■□ 3.96
FMR1-216ENST00000616614 LARGE2Q8N3Y3 721 aa39.81■■■■□ 3.96
FMR1-216ENST00000616614 GGA1Q9UJY5 639 aa39.81■■■■□ 3.96
FMR1-216ENST00000616614 CCDC88AQ3V6T2 1871 aa39.8■■■■□ 3.96
FMR1-216ENST00000616614 KIAA2012Q0VF49 1180 aa39.8■■■■□ 3.96
FMR1-216ENST00000616614 MTX1Q13505 466 aa39.8■■■■□ 3.96
FMR1-216ENST00000616614 LRRC24Q50LG9 513 aa39.8■■■■□ 3.96
FMR1-216ENST00000616614 HELBQ8NG08 1087 aaPredicted RBP39.8■■■■□ 3.96
FMR1-216ENST00000616614 CNNM1Q9NRU3 951 aa39.8■■■■□ 3.96
FMR1-216ENST00000616614 VPS33BQ9H267 617 aa39.79■■■■□ 3.96
FMR1-216ENST00000616614 RIPOR2Q9Y4F9 1068 aa39.79■■■■□ 3.96
FMR1-216ENST00000616614 WASHC4Q2M389 1173 aa39.78■■■■□ 3.96
FMR1-216ENST00000616614 RIMBP2O15034 1052 aa39.77■■■■□ 3.96
FMR1-216ENST00000616614 TAF5LO75529 589 aa39.77■■■■□ 3.96
FMR1-216ENST00000616614 ATP2B4P23634 1241 aa39.77■■■■□ 3.96
FMR1-216ENST00000616614 ANKRD2Q9GZV1 360 aa39.77■■■■□ 3.96
FMR1-216ENST00000616614 SNAP23O00161 211 aa39.76■■■■□ 3.96
FMR1-216ENST00000616614 ZNF784Q8NCA9 323 aaPredicted RBP39.76■■■■□ 3.96
FMR1-216ENST00000616614 ZC3H4Q9UPT8 1303 aaKnown RBP39.76■■■■□ 3.96
FMR1-216ENST00000616614 PNMA6EA0A0J9YXQ4 647 aa39.75■■■■□ 3.95
FMR1-216ENST00000616614 SRGAP3O43295 1099 aa39.75■■■■□ 3.95
FMR1-216ENST00000616614 DDX19BQ9UMR2 479 aa39.75■■■■□ 3.95
FMR1-216ENST00000616614 PA2G4Q9UQ80 394 aaKnown RBP39.74■■■■□ 3.95
FMR1-216ENST00000616614 FZD9O00144 591 aa39.74■■■■□ 3.95
FMR1-216ENST00000616614 ZNF526Q8TF50 670 aaPredicted RBP39.74■■■■□ 3.95
FMR1-216ENST00000616614 JDP2Q8WYK2 163 aa39.74■■■■□ 3.95
FMR1-216ENST00000616614 EYA3Q99504 573 aa39.73■■■■□ 3.95
FMR1-216ENST00000616614 ZBTB40Q9NUA8 1239 aa39.73■■■■□ 3.95
FMR1-216ENST00000616614 LEMD3Q9Y2U8 911 aa39.73■■■■□ 3.95
FMR1-216ENST00000616614 TIAM2Q8IVF5 1701 aa39.73■■■■□ 3.95
FMR1-216ENST00000616614 DICER1Q9UPY3 1922 aaKnown RBP39.72■■■■□ 3.95
FMR1-216ENST00000616614 NIM1KQ8IY84 436 aa39.71■■■■□ 3.95
FMR1-216ENST00000616614 ZNF804BA4D1E1 1349 aa39.71■■■■□ 3.95
FMR1-216ENST00000616614 ZNF541Q9H0D2 1346 aa39.71■■■■□ 3.95
FMR1-216ENST00000616614 EYA2O00167 538 aa39.7■■■■□ 3.95
FMR1-216ENST00000616614 KLRK1P26718 216 aa39.7■■■■□ 3.95
FMR1-216ENST00000616614 ATG9AQ7Z3C6 839 aa39.7■■■■□ 3.95
FMR1-216ENST00000616614 COPRSQ9NQ92 184 aa39.7■■■■□ 3.95
FMR1-216ENST00000616614 ATP8B2P98198 1209 aa39.69■■■■□ 3.94
FMR1-216ENST00000616614 DOK7Q18PE1 504 aa39.69■■■■□ 3.94
FMR1-216ENST00000616614 TXNRD3Q86VQ6 643 aa39.69■■■■□ 3.94
FMR1-216ENST00000616614 ZC3H12CQ9C0D7 883 aaKnown RBP39.69■■■■□ 3.94
FMR1-216ENST00000616614 SIL1Q9H173 461 aa39.69■■■■□ 3.94
FMR1-216ENST00000616614 MROH5Q6ZUA9 1318 aa39.67■■■■□ 3.94
FMR1-216ENST00000616614 GLTPD2A6NH11 291 aa39.67■■■■□ 3.94
FMR1-216ENST00000616614 VGLL2Q8N8G2 317 aa39.67■■■■□ 3.94
FMR1-216ENST00000616614 DBNDD1Q9H9R9 158 aa39.67■■■■□ 3.94
FMR1-216ENST00000616614 ZNRF3Q9ULT6 936 aa39.67■■■■□ 3.94
FMR1-216ENST00000616614 IRS2Q9Y4H2 1338 aa39.67■■■■□ 3.94
FMR1-216ENST00000616614 YDJCA8MPS7 323 aa39.66■■■■□ 3.94
FMR1-216ENST00000616614 POLA2Q14181 598 aa39.66■■■■□ 3.94
FMR1-216ENST00000616614 CEP85Q6P2H3 762 aa39.65■■■■□ 3.94
FMR1-216ENST00000616614 MED23Q9ULK4 1368 aa39.65■■■■□ 3.94
FMR1-216ENST00000616614 DDNO94850 711 aaPredicted RBP39.65■■■■□ 3.94
FMR1-216ENST00000616614 METTL24Q5JXM2 366 aa39.65■■■■□ 3.94
FMR1-216ENST00000616614 CIAO1O76071 339 aa39.64■■■■□ 3.94
FMR1-216ENST00000616614 KCNJ4P48050 445 aa39.64■■■■□ 3.94
FMR1-216ENST00000616614 SSH3Q8TE77 659 aa39.64■■■■□ 3.94
FMR1-216ENST00000616614 KCNQ5Q9NR82 932 aa39.63■■■■□ 3.93
FMR1-216ENST00000616614 FBXO3Q9UK99 471 aa39.63■■■■□ 3.93
FMR1-216ENST00000616614 SUPT16HQ9Y5B9 1047 aaKnown RBP39.63■■■■□ 3.93
FMR1-216ENST00000616614 A0A1B0GUL6 1792 aa39.62■■■■□ 3.93
FMR1-216ENST00000616614 DPY19L2Q6NUT2 758 aa39.62■■■■□ 3.93
FMR1-216ENST00000616614 ECE2O60344 883 aa39.61■■■■□ 3.93
FMR1-216ENST00000616614 PDE8BO95263 885 aa39.61■■■■□ 3.93
FMR1-216ENST00000616614 CXCL9Q07325 125 aa39.61■■■■□ 3.93
FMR1-216ENST00000616614 EIF6P56537 245 aaKnown RBP39.6■■■■□ 3.93
FMR1-216ENST00000616614 GPBP1L1Q9HC44 474 aaPredicted RBP39.59■■■■□ 3.93
FMR1-216ENST00000616614 NMRK2Q9NPI5 230 aa39.59■■■■□ 3.93
FMR1-216ENST00000616614 C15orf52Q6ZUT6 534 aaKnown RBP39.58■■■■□ 3.93
FMR1-216ENST00000616614 CHMP4BQ9H444 224 aaKnown RBP39.58■■■■□ 3.93
FMR1-216ENST00000616614 KDM2BQ8NHM5 1336 aa39.58■■■■□ 3.93
FMR1-216ENST00000616614 RAD17O75943 681 aa39.57■■■■□ 3.93
FMR1-216ENST00000616614 IL15P40933 162 aaPredicted RBP39.57■■■■□ 3.93
FMR1-216ENST00000616614 UBE4AQ14139 1066 aa39.57■■■■□ 3.93
FMR1-216ENST00000616614 SIRT2Q8IXJ6 389 aa39.57■■■■□ 3.93
FMR1-216ENST00000616614 CRBNQ96SW2 442 aa39.57■■■■□ 3.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms