RNA–Protein interactions for RNA: ENST00000615596.1

GTF2I-216, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 717 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-216ENST00000615596 KIAA2012Q0VF49 1180 aa17.34■□□□□ 0.37
GTF2I-216ENST00000615596 LMBR1LQ6UX01 489 aa17.34■□□□□ 0.37
GTF2I-216ENST00000615596 NIM1KQ8IY84 436 aa17.34■□□□□ 0.37
GTF2I-216ENST00000615596 ARHGAP45Q92619 1136 aa17.34■□□□□ 0.37
GTF2I-216ENST00000615596 SUCLG2Q96I99 432 aa17.34■□□□□ 0.37
GTF2I-216ENST00000615596 USP44Q9H0E7 712 aa17.34■□□□□ 0.37
GTF2I-216ENST00000615596 BSDC1Q9NW68 430 aaPredicted RBP17.34■□□□□ 0.37
GTF2I-216ENST00000615596 PODXL2Q9NZ53 605 aa17.34■□□□□ 0.37
GTF2I-216ENST00000615596 POTECB2RU33 542 aa17.33■□□□□ 0.36
GTF2I-216ENST00000615596 C6orf229H3BNL8 230 aa17.33■□□□□ 0.36
GTF2I-216ENST00000615596 VEGFAP15692 232 aaPredicted RBP17.33■□□□□ 0.36
GTF2I-216ENST00000615596 IGHMBP2P38935 993 aaKnown RBP17.33■□□□□ 0.36
GTF2I-216ENST00000615596 CCT4P50991 539 aaKnown RBP17.33■□□□□ 0.36
GTF2I-216ENST00000615596 TBC1D16Q8TBP0 767 aa17.33■□□□□ 0.36
GTF2I-216ENST00000615596 KAZALD1Q96I82 304 aa17.33■□□□□ 0.36
GTF2I-216ENST00000615596 ANKIB1Q9P2G1 1089 aa17.33■□□□□ 0.36
GTF2I-216ENST00000615596 ANKRD18BA2A2Z9 1011 aa17.32■□□□□ 0.36
GTF2I-216ENST00000615596 EIF6P56537 245 aaKnown RBP17.32■□□□□ 0.36
GTF2I-216ENST00000615596 IFIT5Q13325 482 aaKnown RBP17.32■□□□□ 0.36
GTF2I-216ENST00000615596 WASHC4Q2M389 1173 aa17.32■□□□□ 0.36
GTF2I-216ENST00000615596 MINPP1Q9UNW1 487 aa17.32■□□□□ 0.36
GTF2I-216ENST00000615596 CHMP3Q9Y3E7 222 aa17.32■□□□□ 0.36
GTF2I-216ENST00000615596 LTBP1Q14766 1721 aa17.32■□□□□ 0.36
GTF2I-216ENST00000615596 WDR90Q96KV7 1748 aa17.31■□□□□ 0.36
GTF2I-216ENST00000615596 IPO8O15397 1037 aaKnown RBP17.31■□□□□ 0.36
GTF2I-216ENST00000615596 TOMM70O94826 608 aa17.31■□□□□ 0.36
GTF2I-216ENST00000615596 UFL1O94874 794 aa17.31■□□□□ 0.36
GTF2I-216ENST00000615596 L3MBTL3Q96JM7 780 aaPredicted RBP17.31■□□□□ 0.36
GTF2I-216ENST00000615596 GPR101Q96P66 508 aaPredicted RBP17.31■□□□□ 0.36
GTF2I-216ENST00000615596 GGA1Q9UJY5 639 aa17.31■□□□□ 0.36
GTF2I-216ENST00000615596 ZNRF3Q9ULT6 936 aa17.31■□□□□ 0.36
GTF2I-216ENST00000615596 XDHP47989 1333 aa17.3■□□□□ 0.36
GTF2I-216ENST00000615596 RIMBP2O15034 1052 aa17.3■□□□□ 0.36
GTF2I-216ENST00000615596 C16orf71Q8IYS4 520 aaPredicted RBP17.3■□□□□ 0.36
GTF2I-216ENST00000615596 GPC2Q8N158 579 aa17.3■□□□□ 0.36
GTF2I-216ENST00000615596 FRAT1Q92837 279 aaPredicted RBP17.3■□□□□ 0.36
GTF2I-216ENST00000615596 EYA3Q99504 573 aa17.3■□□□□ 0.36
GTF2I-216ENST00000615596 MPHOSPH8Q99549 860 aa17.3■□□□□ 0.36
GTF2I-216ENST00000615596 TRIM27P14373 513 aa17.29■□□□□ 0.36
GTF2I-216ENST00000615596 CCDC57Q2TAC2 916 aa17.29■□□□□ 0.36
GTF2I-216ENST00000615596 RABL6Q3YEC7 729 aaPredicted RBP17.29■□□□□ 0.36
GTF2I-216ENST00000615596 BICC1Q9H694 974 aaKnown RBP17.29■□□□□ 0.36
GTF2I-216ENST00000615596 GJA3Q9Y6H8 435 aa17.29■□□□□ 0.36
GTF2I-216ENST00000615596 ATP2B4P23634 1241 aa17.28■□□□□ 0.36
GTF2I-216ENST00000615596 CXCL9Q07325 125 aa17.28■□□□□ 0.36
GTF2I-216ENST00000615596 INTS3Q68E01 1043 aaKnown RBP17.28■□□□□ 0.36
GTF2I-216ENST00000615596 ATF7IPQ6VMQ6 1270 aa17.28■□□□□ 0.36
GTF2I-216ENST00000615596 ANKRD44Q8N8A2 993 aa17.28■□□□□ 0.36
GTF2I-216ENST00000615596 ZC3H12CQ9C0D7 883 aaKnown RBP17.28■□□□□ 0.36
GTF2I-216ENST00000615596 TNNQ9UQP3 1299 aa17.28■□□□□ 0.36
GTF2I-216ENST00000615596 SPEF2Q9C093 1822 aa17.28■□□□□ 0.36
GTF2I-216ENST00000615596 IQCA1LA6NCM1 817 aa17.27■□□□□ 0.36
GTF2I-216ENST00000615596 WTIPA6NIX2 430 aaPredicted RBP17.27■□□□□ 0.36
GTF2I-216ENST00000615596 YDJCA8MPS7 323 aa17.27■□□□□ 0.36
GTF2I-216ENST00000615596 RBM46Q8TBY0 533 aaKnown RBP17.27■□□□□ 0.36
GTF2I-216ENST00000615596 ZNF594Q96JF6 807 aaPredicted RBP17.27■□□□□ 0.36
GTF2I-216ENST00000615596 ANKRD2Q9GZV1 360 aa17.27■□□□□ 0.36
GTF2I-216ENST00000615596 DBNDD1Q9H9R9 158 aa17.27■□□□□ 0.36
GTF2I-216ENST00000615596 RAD17O75943 681 aa17.26■□□□□ 0.35
GTF2I-216ENST00000615596 CHRNDQ07001 517 aa17.26■□□□□ 0.35
GTF2I-216ENST00000615596 DOK7Q18PE1 504 aa17.26■□□□□ 0.35
GTF2I-216ENST00000615596 TAF7LQ5H9L4 462 aa17.26■□□□□ 0.35
GTF2I-216ENST00000615596 ZKSCAN2Q63HK3 967 aa17.26■□□□□ 0.35
GTF2I-216ENST00000615596 ECE2O60344 883 aa17.25■□□□□ 0.35
GTF2I-216ENST00000615596 UBTFL1P0CB47 393 aaPredicted RBP17.25■□□□□ 0.35
GTF2I-216ENST00000615596 CIAPIN1Q6FI81 312 aa17.25■□□□□ 0.35
GTF2I-216ENST00000615596 LDHAL6AQ6ZMR3 332 aa17.25■□□□□ 0.35
GTF2I-216ENST00000615596 CLUAP1Q96AJ1 413 aa17.25■□□□□ 0.35
GTF2I-216ENST00000615596 TAF1DQ9H5J8 278 aaPredicted RBP17.25■□□□□ 0.35
GTF2I-216ENST00000615596 HACL1Q9UJ83 578 aa17.25■□□□□ 0.35
GTF2I-216ENST00000615596 LEMD3Q9Y2U8 911 aa17.25■□□□□ 0.35
GTF2I-216ENST00000615596 SCNN1DP51172 638 aa17.24■□□□□ 0.35
GTF2I-216ENST00000615596 TNIP1Q15025 636 aa17.24■□□□□ 0.35
GTF2I-216ENST00000615596 MEIS3Q99687 375 aa17.24■□□□□ 0.35
GTF2I-216ENST00000615596 ZNF804BA4D1E1 1349 aa17.23■□□□□ 0.35
GTF2I-216ENST00000615596 HELBQ8NG08 1087 aaPredicted RBP17.23■□□□□ 0.35
GTF2I-216ENST00000615596 KCNQ5Q9NR82 932 aa17.23■□□□□ 0.35
GTF2I-216ENST00000615596 CNNM1Q9NRU3 951 aa17.23■□□□□ 0.35
GTF2I-216ENST00000615596 MED23Q9ULK4 1368 aa17.23■□□□□ 0.35
GTF2I-216ENST00000615596 SCN4AP35499 1836 aa17.23■□□□□ 0.35
GTF2I-216ENST00000615596 G3V3G9 751 aa17.22■□□□□ 0.35
GTF2I-216ENST00000615596 TAF5LO75529 589 aa17.22■□□□□ 0.35
GTF2I-216ENST00000615596 EPHX2P34913 555 aa17.22■□□□□ 0.35
GTF2I-216ENST00000615596 FSTL1Q12841 308 aa17.22■□□□□ 0.35
GTF2I-216ENST00000615596 DCAF8Q5TAQ9 597 aa17.22■□□□□ 0.35
GTF2I-216ENST00000615596 SMC1BQ8NDV3 1235 aa17.22■□□□□ 0.35
GTF2I-216ENST00000615596 PUS3Q9BZE2 481 aaKnown RBP17.22■□□□□ 0.35
GTF2I-216ENST00000615596 HDAC5Q9UQL6 1122 aa17.22■□□□□ 0.35
GTF2I-216ENST00000615596 LRRFIP2Q9Y608 721 aaKnown RBP17.22■□□□□ 0.35
GTF2I-216ENST00000615596 CEP350Q5VT06 3117 aa17.21■□□□□ 0.35
GTF2I-216ENST00000615596 SNAP23O00161 211 aa17.21■□□□□ 0.35
GTF2I-216ENST00000615596 PSMD14O00487 310 aa17.21■□□□□ 0.35
GTF2I-216ENST00000615596 POTEIP0CG38 1075 aa17.21■□□□□ 0.35
GTF2I-216ENST00000615596 POTEJP0CG39 1038 aa17.21■□□□□ 0.35
GTF2I-216ENST00000615596 LMOD1P29536 600 aaPredicted RBP17.21■□□□□ 0.35
GTF2I-216ENST00000615596 EPS15P42566 896 aa17.21■□□□□ 0.35
GTF2I-216ENST00000615596 KCNJ4P48050 445 aa17.21■□□□□ 0.35
GTF2I-216ENST00000615596 GMPSP49915 693 aaPredicted RBP17.21■□□□□ 0.35
GTF2I-216ENST00000615596 TXNRD3Q86VQ6 643 aa17.21■□□□□ 0.35
GTF2I-216ENST00000615596 TMEM57Q8N5G2 664 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms