RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 MPHOSPH8Q99549 860 aa16.04■□□□□ 0.16
CCL4-201ENST00000613947 ZNF277Q9NRM2 450 aaPredicted RBP16.04■□□□□ 0.16
CCL4-201ENST00000613947 NSFL1CQ9UNZ2 370 aaKnown RBP16.04■□□□□ 0.16
CCL4-201ENST00000613947 GPSM2P81274 684 aa16.03■□□□□ 0.16
CCL4-201ENST00000613947 C9orf131Q5VYM1 1079 aa16.03■□□□□ 0.16
CCL4-201ENST00000613947 DPP8Q6V1X1 898 aaPredicted RBP16.03■□□□□ 0.16
CCL4-201ENST00000613947 MINPP1Q9UNW1 487 aa16.03■□□□□ 0.16
CCL4-201ENST00000613947 SBF1O95248 1867 aa16.03■□□□□ 0.16
CCL4-201ENST00000613947 PRKCSHP14314 528 aaPredicted RBP16.03■□□□□ 0.16
CCL4-201ENST00000613947 LMNB1P20700 586 aa16.03■□□□□ 0.16
CCL4-201ENST00000613947 TAF7LQ5H9L4 462 aa16.03■□□□□ 0.16
CCL4-201ENST00000613947 IPO9Q96P70 1041 aaKnown RBP16.03■□□□□ 0.16
CCL4-201ENST00000613947 LDHAL6AQ6ZMR3 332 aa16.02■□□□□ 0.15
CCL4-201ENST00000613947 KLHDC4Q8TBB5 520 aa16.02■□□□□ 0.15
CCL4-201ENST00000613947 C1orf115Q9H7X2 142 aa16.02■□□□□ 0.15
CCL4-201ENST00000613947 RNF181Q9P0P0 153 aa16.02■□□□□ 0.15
CCL4-201ENST00000613947 ANKIB1Q9P2G1 1089 aa16.02■□□□□ 0.15
CCL4-201ENST00000613947 LRRC37AA6NMS7 1700 aa16.01■□□□□ 0.15
CCL4-201ENST00000613947 CCDC88AQ3V6T2 1871 aa16.01■□□□□ 0.15
CCL4-201ENST00000613947 RFX5P48382 616 aaPredicted RBP16.01■□□□□ 0.15
CCL4-201ENST00000613947 B4GALNT3Q6L9W6 998 aa16.01■□□□□ 0.15
CCL4-201ENST00000613947 RTFDC1Q9BY42 306 aaPredicted RBP16.01■□□□□ 0.15
CCL4-201ENST00000613947 DDX19BQ9UMR2 479 aa16.01■□□□□ 0.15
CCL4-201ENST00000613947 SPEF2Q9C093 1822 aa16.01■□□□□ 0.15
CCL4-201ENST00000613947 ANP32AP39687 249 aaKnown RBP16■□□□□ 0.15
CCL4-201ENST00000613947 PUS3Q9BZE2 481 aaKnown RBP16■□□□□ 0.15
CCL4-201ENST00000613947 PODXL2Q9NZ53 605 aa16■□□□□ 0.15
CCL4-201ENST00000613947 POLLQ9UGP5 575 aa16■□□□□ 0.15
CCL4-201ENST00000613947 WTIPA6NIX2 430 aaPredicted RBP16■□□□□ 0.15
CCL4-201ENST00000613947 IARSP41252 1262 aaKnown RBP16■□□□□ 0.15
CCL4-201ENST00000613947 CNNM1Q9NRU3 951 aa16■□□□□ 0.15
CCL4-201ENST00000613947 XDHP47989 1333 aa15.99■□□□□ 0.15
CCL4-201ENST00000613947 C6orf229H3BNL8 230 aa15.99■□□□□ 0.15
CCL4-201ENST00000613947 SRGAP3O43295 1099 aa15.99■□□□□ 0.15
CCL4-201ENST00000613947 PTPN12Q05209 780 aaKnown RBP15.99■□□□□ 0.15
CCL4-201ENST00000613947 CHRNDQ07001 517 aa15.99■□□□□ 0.15
CCL4-201ENST00000613947 MTX1Q13505 466 aa15.99■□□□□ 0.15
CCL4-201ENST00000613947 TBC1D16Q8TBP0 767 aa15.99■□□□□ 0.15
CCL4-201ENST00000613947 YY1P25490 414 aa15.98■□□□□ 0.15
CCL4-201ENST00000613947 LRRC24Q50LG9 513 aa15.98■□□□□ 0.15
CCL4-201ENST00000613947 SUPT20HQ8NEM7 779 aa15.98■□□□□ 0.15
CCL4-201ENST00000613947 HELBQ8NG08 1087 aaPredicted RBP15.98■□□□□ 0.15
CCL4-201ENST00000613947 GPR101Q96P66 508 aaPredicted RBP15.98■□□□□ 0.15
CCL4-201ENST00000613947 ZBTB40Q9NUA8 1239 aa15.98■□□□□ 0.15
CCL4-201ENST00000613947 GGA1Q9UJY5 639 aa15.98■□□□□ 0.15
CCL4-201ENST00000613947 DUOX1Q9NRD9 1551 aa15.98■□□□□ 0.15
CCL4-201ENST00000613947 PNMA6EA0A0J9YXQ4 647 aa15.98■□□□□ 0.15
CCL4-201ENST00000613947 PPIP5K2O43314 1243 aa15.98■□□□□ 0.15
CCL4-201ENST00000613947 UFL1O94874 794 aa15.98■□□□□ 0.15
CCL4-201ENST00000613947 AOC3Q16853 763 aa15.98■□□□□ 0.15
CCL4-201ENST00000613947 ANKRD2Q9GZV1 360 aa15.98■□□□□ 0.15
CCL4-201ENST00000613947 RIPOR2Q9Y4F9 1068 aa15.98■□□□□ 0.15
CCL4-201ENST00000613947 LTBP1Q14766 1721 aa15.97■□□□□ 0.15
CCL4-201ENST00000613947 TAF5LO75529 589 aa15.97■□□□□ 0.15
CCL4-201ENST00000613947 WASHC4Q2M389 1173 aa15.97■□□□□ 0.15
CCL4-201ENST00000613947 LARGE2Q8N3Y3 721 aa15.97■□□□□ 0.15
CCL4-201ENST00000613947 PA2G4Q9UQ80 394 aaKnown RBP15.97■□□□□ 0.15
CCL4-201ENST00000613947 SNAP23O00161 211 aa15.96■□□□□ 0.15
CCL4-201ENST00000613947 ATP8B2P98198 1209 aa15.96■□□□□ 0.15
CCL4-201ENST00000613947 KIAA2012Q0VF49 1180 aa15.96■□□□□ 0.15
CCL4-201ENST00000613947 SIL1Q9H173 461 aa15.96■□□□□ 0.15
CCL4-201ENST00000613947 VPS33BQ9H267 617 aa15.96■□□□□ 0.15
CCL4-201ENST00000613947 EYA2O00167 538 aa15.95■□□□□ 0.14
CCL4-201ENST00000613947 RIMBP2O15034 1052 aa15.95■□□□□ 0.14
CCL4-201ENST00000613947 ATP2B4P23634 1241 aa15.95■□□□□ 0.14
CCL4-201ENST00000613947 JDP2Q8WYK2 163 aa15.95■□□□□ 0.14
CCL4-201ENST00000613947 CHMP4BQ9H444 224 aaKnown RBP15.95■□□□□ 0.14
CCL4-201ENST00000613947 COPRSQ9NQ92 184 aa15.95■□□□□ 0.14
CCL4-201ENST00000613947 DICER1Q9UPY3 1922 aaKnown RBP15.95■□□□□ 0.14
CCL4-201ENST00000613947 COL4A5P29400 1685 aa15.95■□□□□ 0.14
CCL4-201ENST00000613947 CEP85Q6P2H3 762 aa15.95■□□□□ 0.14
CCL4-201ENST00000613947 EYA3Q99504 573 aa15.95■□□□□ 0.14
CCL4-201ENST00000613947 ZBTB47Q9UFB7 747 aaPredicted RBP15.95■□□□□ 0.14
CCL4-201ENST00000613947 LEMD3Q9Y2U8 911 aa15.95■□□□□ 0.14
CCL4-201ENST00000613947 POLA2Q14181 598 aa15.94■□□□□ 0.14
CCL4-201ENST00000613947 ATG9AQ7Z3C6 839 aa15.94■□□□□ 0.14
CCL4-201ENST00000613947 SSH3Q8TE77 659 aa15.94■□□□□ 0.14
CCL4-201ENST00000613947 ZC3H12CQ9C0D7 883 aaKnown RBP15.94■□□□□ 0.14
CCL4-201ENST00000613947 ZNF804BA4D1E1 1349 aa15.94■□□□□ 0.14
CCL4-201ENST00000613947 MROH5Q6ZUA9 1318 aa15.94■□□□□ 0.14
CCL4-201ENST00000613947 METTL24Q5JXM2 366 aa15.93■□□□□ 0.14
CCL4-201ENST00000613947 CRBNQ96SW2 442 aa15.93■□□□□ 0.14
CCL4-201ENST00000613947 ZC3H4Q9UPT8 1303 aaKnown RBP15.93■□□□□ 0.14
CCL4-201ENST00000613947 FZD9O00144 591 aa15.92■□□□□ 0.14
CCL4-201ENST00000613947 CIAO1O76071 339 aa15.92■□□□□ 0.14
CCL4-201ENST00000613947 KLRK1P26718 216 aa15.92■□□□□ 0.14
CCL4-201ENST00000613947 KCNJ4P48050 445 aa15.92■□□□□ 0.14
CCL4-201ENST00000613947 TXNRD3Q86VQ6 643 aa15.92■□□□□ 0.14
CCL4-201ENST00000613947 VGLL2Q8N8G2 317 aa15.92■□□□□ 0.14
CCL4-201ENST00000613947 FBXO3Q9UK99 471 aa15.92■□□□□ 0.14
CCL4-201ENST00000613947 DOK7Q18PE1 504 aa15.92■□□□□ 0.14
CCL4-201ENST00000613947 NIM1KQ8IY84 436 aa15.92■□□□□ 0.14
CCL4-201ENST00000613947 DBNDD1Q9H9R9 158 aa15.92■□□□□ 0.14
CCL4-201ENST00000613947 PDE8BO95263 885 aa15.91■□□□□ 0.14
CCL4-201ENST00000613947 IL15P40933 162 aaPredicted RBP15.91■□□□□ 0.14
CCL4-201ENST00000613947 SIRT2Q8IXJ6 389 aa15.91■□□□□ 0.14
CCL4-201ENST00000613947 RPAP2Q8IXW5 612 aaPredicted RBP15.91■□□□□ 0.14
CCL4-201ENST00000613947 ZNRF3Q9ULT6 936 aa15.91■□□□□ 0.14
CCL4-201ENST00000613947 ZNF526Q8TF50 670 aaPredicted RBP15.9■□□□□ 0.14
CCL4-201ENST00000613947 TIAM2Q8IVF5 1701 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms