RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 CXCL9Q07325 125 aa16.04■□□□□ 0.16
CSTF1-208ENST00000613138 TMC4Q7Z404 712 aa16.04■□□□□ 0.16
CSTF1-208ENST00000613138 ANKIB1Q9P2G1 1089 aa16.04■□□□□ 0.16
CSTF1-208ENST00000613138 MINPP1Q9UNW1 487 aa16.04■□□□□ 0.16
CSTF1-208ENST00000613138 KLRK1P26718 216 aa16.03■□□□□ 0.16
CSTF1-208ENST00000613138 EIF6P56537 245 aaKnown RBP16.03■□□□□ 0.16
CSTF1-208ENST00000613138 HTRA3P83110 453 aa16.03■□□□□ 0.16
CSTF1-208ENST00000613138 WASHC4Q2M389 1173 aa16.03■□□□□ 0.16
CSTF1-208ENST00000613138 GRIPAP1Q4V328 841 aa16.03■□□□□ 0.16
CSTF1-208ENST00000613138 C16orf71Q8IYS4 520 aaPredicted RBP16.03■□□□□ 0.16
CSTF1-208ENST00000613138 SUPT20HQ8NEM7 779 aa16.03■□□□□ 0.16
CSTF1-208ENST00000613138 HELBQ8NG08 1087 aaPredicted RBP16.03■□□□□ 0.16
CSTF1-208ENST00000613138 L3MBTL3Q96JM7 780 aaPredicted RBP16.03■□□□□ 0.16
CSTF1-208ENST00000613138 CDC5LQ99459 802 aaKnown RBP16.03■□□□□ 0.16
CSTF1-208ENST00000613138 ZBED9Q6R2W3 1325 aa16.02■□□□□ 0.16
CSTF1-208ENST00000613138 CT47B1P0C2W7 299 aaPredicted RBP16.02■□□□□ 0.16
CSTF1-208ENST00000613138 EPS15P42566 896 aa16.02■□□□□ 0.16
CSTF1-208ENST00000613138 ANKRD44Q8N8A2 993 aa16.02■□□□□ 0.16
CSTF1-208ENST00000613138 USP44Q9H0E7 712 aa16.02■□□□□ 0.16
CSTF1-208ENST00000613138 BICC1Q9H694 974 aaKnown RBP16.02■□□□□ 0.16
CSTF1-208ENST00000613138 BSDC1Q9NW68 430 aaPredicted RBP16.02■□□□□ 0.16
CSTF1-208ENST00000613138 PODXL2Q9NZ53 605 aa16.02■□□□□ 0.16
CSTF1-208ENST00000613138 ZNRF3Q9ULT6 936 aa16.02■□□□□ 0.16
CSTF1-208ENST00000613138 ZNF646O15015 1829 aaPredicted RBP16.01■□□□□ 0.15
CSTF1-208ENST00000613138 UTYO14607 1347 aa16.01■□□□□ 0.15
CSTF1-208ENST00000613138 ECE2O60344 883 aa16.01■□□□□ 0.15
CSTF1-208ENST00000613138 SCNN1DP51172 638 aa16.01■□□□□ 0.15
CSTF1-208ENST00000613138 TXNRD3Q86VQ6 643 aa16.01■□□□□ 0.15
CSTF1-208ENST00000613138 GPC2Q8N158 579 aa16.01■□□□□ 0.15
CSTF1-208ENST00000613138 RBM46Q8TBY0 533 aaKnown RBP16.01■□□□□ 0.15
CSTF1-208ENST00000613138 TAF1DQ9H5J8 278 aaPredicted RBP16.01■□□□□ 0.15
CSTF1-208ENST00000613138 GGA1Q9UJY5 639 aa16.01■□□□□ 0.15
CSTF1-208ENST00000613138 PSME4Q14997 1843 aa16.01■□□□□ 0.15
CSTF1-208ENST00000613138 ADAMTSL1Q8N6G6 1762 aa16■□□□□ 0.15
CSTF1-208ENST00000613138 XDHP47989 1333 aa16■□□□□ 0.15
CSTF1-208ENST00000613138 ANKRD18BA2A2Z9 1011 aa16■□□□□ 0.15
CSTF1-208ENST00000613138 TAF5LO75529 589 aa16■□□□□ 0.15
CSTF1-208ENST00000613138 IGHMBP2P38935 993 aaKnown RBP16■□□□□ 0.15
CSTF1-208ENST00000613138 EAPPQ56P03 285 aaPredicted RBP16■□□□□ 0.15
CSTF1-208ENST00000613138 FRAT1Q92837 279 aaPredicted RBP16■□□□□ 0.15
CSTF1-208ENST00000613138 PUS3Q9BZE2 481 aaKnown RBP16■□□□□ 0.15
CSTF1-208ENST00000613138 ZBTB12Q9Y330 459 aaPredicted RBP16■□□□□ 0.15
CSTF1-208ENST00000613138 POLR2AP24928 1970 aaKnown RBP15.99■□□□□ 0.15
CSTF1-208ENST00000613138 PSMD14O00487 310 aa15.99■□□□□ 0.15
CSTF1-208ENST00000613138 GMPSP49915 693 aaPredicted RBP15.99■□□□□ 0.15
CSTF1-208ENST00000613138 BRPF1P55201 1214 aaPredicted RBP15.99■□□□□ 0.15
CSTF1-208ENST00000613138 IFIT5Q13325 482 aaKnown RBP15.99■□□□□ 0.15
CSTF1-208ENST00000613138 KLHDC4Q8TBB5 520 aa15.99■□□□□ 0.15
CSTF1-208ENST00000613138 CLUAP1Q96AJ1 413 aa15.99■□□□□ 0.15
CSTF1-208ENST00000613138 HACL1Q9UJ83 578 aa15.99■□□□□ 0.15
CSTF1-208ENST00000613138 TRIM27P14373 513 aa15.98■□□□□ 0.15
CSTF1-208ENST00000613138 HSPA6P17066 643 aa15.98■□□□□ 0.15
CSTF1-208ENST00000613138 EPHX2P34913 555 aa15.98■□□□□ 0.15
CSTF1-208ENST00000613138 CCT4P50991 539 aaKnown RBP15.98■□□□□ 0.15
CSTF1-208ENST00000613138 CHRNDQ07001 517 aa15.98■□□□□ 0.15
CSTF1-208ENST00000613138 CIAPIN1Q6FI81 312 aa15.98■□□□□ 0.15
CSTF1-208ENST00000613138 MPHOSPH8Q99549 860 aa15.98■□□□□ 0.15
CSTF1-208ENST00000613138 VPS33BQ9H267 617 aa15.98■□□□□ 0.15
CSTF1-208ENST00000613138 PLIN1O60240 522 aa15.97■□□□□ 0.15
CSTF1-208ENST00000613138 EYA3Q99504 573 aa15.97■□□□□ 0.15
CSTF1-208ENST00000613138 MEIS3Q99687 375 aa15.97■□□□□ 0.15
CSTF1-208ENST00000613138 ZC3H12CQ9C0D7 883 aaKnown RBP15.97■□□□□ 0.15
CSTF1-208ENST00000613138 ATP2B4P23634 1241 aa15.96■□□□□ 0.15
CSTF1-208ENST00000613138 FMR1Q06787 632 aaKnown RBP eCLIP15.96■□□□□ 0.15
CSTF1-208ENST00000613138 CCDC57Q2TAC2 916 aa15.96■□□□□ 0.15
CSTF1-208ENST00000613138 SMC1BQ8NDV3 1235 aa15.96■□□□□ 0.15
CSTF1-208ENST00000613138 MXD3Q9BW11 206 aa15.96■□□□□ 0.15
CSTF1-208ENST00000613138 API5Q9BZZ5 524 aaKnown RBP15.96■□□□□ 0.15
CSTF1-208ENST00000613138 IQCA1LA6NCM1 817 aa15.95■□□□□ 0.14
CSTF1-208ENST00000613138 RABL6Q3YEC7 729 aaPredicted RBP15.95■□□□□ 0.14
CSTF1-208ENST00000613138 LRRC24Q50LG9 513 aa15.95■□□□□ 0.14
CSTF1-208ENST00000613138 TAF7LQ5H9L4 462 aa15.95■□□□□ 0.14
CSTF1-208ENST00000613138 MAP1SQ66K74 1059 aaPredicted RBP15.95■□□□□ 0.14
CSTF1-208ENST00000613138 TRPM4Q8TD43 1214 aa15.95■□□□□ 0.14
CSTF1-208ENST00000613138 GPRC5DQ9NZD1 345 aa15.95■□□□□ 0.14
CSTF1-208ENST00000613138 ZNF804BA4D1E1 1349 aa15.94■□□□□ 0.14
CSTF1-208ENST00000613138 KIF16BQ96L93 1317 aa15.94■□□□□ 0.14
CSTF1-208ENST00000613138 IRS2Q9Y4H2 1338 aa15.94■□□□□ 0.14
CSTF1-208ENST00000613138 EGFRP00533 1210 aa15.94■□□□□ 0.14
CSTF1-208ENST00000613138 CHADLQ6NUI6 762 aa15.94■□□□□ 0.14
CSTF1-208ENST00000613138 LDHAL6AQ6ZMR3 332 aa15.94■□□□□ 0.14
CSTF1-208ENST00000613138 CLEC11AQ9Y240 323 aa15.94■□□□□ 0.14
CSTF1-208ENST00000613138 LRRFIP2Q9Y608 721 aaKnown RBP15.94■□□□□ 0.14
CSTF1-208ENST00000613138 MED23Q9ULK4 1368 aa15.93■□□□□ 0.14
CSTF1-208ENST00000613138 RLBP1P12271 317 aa15.93■□□□□ 0.14
CSTF1-208ENST00000613138 LMOD1P29536 600 aaPredicted RBP15.93■□□□□ 0.14
CSTF1-208ENST00000613138 RFX5P48382 616 aaPredicted RBP15.93■□□□□ 0.14
CSTF1-208ENST00000613138 HIRAP54198 1017 aaPredicted RBP15.93■□□□□ 0.14
CSTF1-208ENST00000613138 FSTL1Q12841 308 aa15.93■□□□□ 0.14
CSTF1-208ENST00000613138 ATF7IPQ6VMQ6 1270 aa15.93■□□□□ 0.14
CSTF1-208ENST00000613138 CNNM1Q9NRU3 951 aa15.93■□□□□ 0.14
CSTF1-208ENST00000613138 G3V3G9 751 aa15.92■□□□□ 0.14
CSTF1-208ENST00000613138 UBTFL1P0CB47 393 aaPredicted RBP15.92■□□□□ 0.14
CSTF1-208ENST00000613138 TNIP1Q15025 636 aa15.92■□□□□ 0.14
CSTF1-208ENST00000613138 DCAF8Q5TAQ9 597 aa15.92■□□□□ 0.14
CSTF1-208ENST00000613138 INTS3Q68E01 1043 aaKnown RBP15.92■□□□□ 0.14
CSTF1-208ENST00000613138 DLK2Q6UY11 383 aa15.92■□□□□ 0.14
CSTF1-208ENST00000613138 SAMD7Q7Z3H4 446 aa15.92■□□□□ 0.14
CSTF1-208ENST00000613138 LDHDQ86WU2 507 aa15.92■□□□□ 0.14
CSTF1-208ENST00000613138 MICALL2Q8IY33 904 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms