RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 CTU1Q7Z7A3 348 aaKnown RBP22.51■■□□□ 1.19
CSNK1E-215ENST00000612795 POLLQ9UGP5 575 aa22.51■■□□□ 1.19
CSNK1E-215ENST00000612795 KCNQ5Q9NR82 932 aa22.5■■□□□ 1.19
CSNK1E-215ENST00000612795 G3V3G9 751 aa22.49■■□□□ 1.19
CSNK1E-215ENST00000612795 SF3B3Q15393 1217 aaKnown RBP22.49■■□□□ 1.19
CSNK1E-215ENST00000612795 DCAF8Q5TAQ9 597 aa22.49■■□□□ 1.19
CSNK1E-215ENST00000612795 CDCA5Q96FF9 252 aa22.49■■□□□ 1.19
CSNK1E-215ENST00000612795 FAM89AQ96GI7 184 aa22.49■■□□□ 1.19
CSNK1E-215ENST00000612795 CSRNP1Q96S65 589 aa22.49■■□□□ 1.19
CSNK1E-215ENST00000612795 CHPF2Q9P2E5 772 aa22.49■■□□□ 1.19
CSNK1E-215ENST00000612795 RTL5Q5HYW3 569 aaPredicted RBP22.47■■□□□ 1.19
CSNK1E-215ENST00000612795 PRPF38BQ5VTL8 546 aaKnown RBP22.47■■□□□ 1.19
CSNK1E-215ENST00000612795 REM2Q8IYK8 340 aaPredicted RBP22.47■■□□□ 1.19
CSNK1E-215ENST00000612795 PLBD2Q8NHP8 589 aa22.47■■□□□ 1.19
CSNK1E-215ENST00000612795 TBC1D16Q8TBP0 767 aa22.47■■□□□ 1.19
CSNK1E-215ENST00000612795 ZC3H12CQ9C0D7 883 aaKnown RBP22.47■■□□□ 1.19
CSNK1E-215ENST00000612795 ATP5J2-PTCD1G3V325 749 aa22.46■■□□□ 1.19
CSNK1E-215ENST00000612795 RASAL3Q86YV0 1011 aa22.46■■□□□ 1.19
CSNK1E-215ENST00000612795 ASTN2O75129 1339 aaPredicted RBP22.46■■□□□ 1.19
CSNK1E-215ENST00000612795 VIL1P09327 827 aaKnown RBP22.45■■□□□ 1.18
CSNK1E-215ENST00000612795 KRT24Q2M2I5 525 aa22.45■■□□□ 1.18
CSNK1E-215ENST00000612795 HDGFL1Q5TGJ6 251 aa22.45■■□□□ 1.18
CSNK1E-215ENST00000612795 ANGEL2Q5VTE6 544 aaKnown RBP22.45■■□□□ 1.18
CSNK1E-215ENST00000612795 ANKRD13DQ6ZTN6 518 aa22.45■■□□□ 1.18
CSNK1E-215ENST00000612795 ISCA1Q9BUE6 129 aa22.45■■□□□ 1.18
CSNK1E-215ENST00000612795 UFL1O94874 794 aa22.44■■□□□ 1.18
CSNK1E-215ENST00000612795 TMPOP42166 694 aaKnown RBP22.44■■□□□ 1.18
CSNK1E-215ENST00000612795 RPS8P62241 208 aaKnown RBP22.44■■□□□ 1.18
CSNK1E-215ENST00000612795 IRS4O14654 1257 aaPredicted RBP22.43■■□□□ 1.18
CSNK1E-215ENST00000612795 ANKIB1Q9P2G1 1089 aa22.43■■□□□ 1.18
CSNK1E-215ENST00000612795 HDAC9Q9UKV0 1011 aa22.43■■□□□ 1.18
CSNK1E-215ENST00000612795 HPS5Q9UPZ3 1129 aa22.43■■□□□ 1.18
CSNK1E-215ENST00000612795 LAS1LQ9Y4W2 734 aaKnown RBP22.43■■□□□ 1.18
CSNK1E-215ENST00000612795 SPEF2Q9C093 1822 aa22.43■■□□□ 1.18
CSNK1E-215ENST00000612795 ZNF609O15014 1411 aa22.42■■□□□ 1.18
CSNK1E-215ENST00000612795 FKBP1BP68106 108 aa22.42■■□□□ 1.18
CSNK1E-215ENST00000612795 SCARF1Q14162 830 aa22.42■■□□□ 1.18
CSNK1E-215ENST00000612795 RSBN1LQ6PCB5 846 aaPredicted RBP22.41■■□□□ 1.18
CSNK1E-215ENST00000612795 AGBL3Q8NEM8 1001 aa22.41■■□□□ 1.18
CSNK1E-215ENST00000612795 PODXL2Q9NZ53 605 aa22.41■■□□□ 1.18
CSNK1E-215ENST00000612795 DBF4Q9UBU7 674 aaPredicted RBP22.41■■□□□ 1.18
CSNK1E-215ENST00000612795 GGA1Q9UJY5 639 aa22.41■■□□□ 1.18
CSNK1E-215ENST00000612795 ZNF280AP59817 542 aaPredicted RBP22.4■■□□□ 1.18
CSNK1E-215ENST00000612795 NEUROD2Q15784 382 aa22.4■■□□□ 1.18
CSNK1E-215ENST00000612795 PKN2Q16513 984 aaKnown RBP22.4■■□□□ 1.18
CSNK1E-215ENST00000612795 PITPNM2Q9BZ72 1349 aa22.38■■□□□ 1.17
CSNK1E-215ENST00000612795 MYH3P11055 1940 aa22.38■■□□□ 1.17
CSNK1E-215ENST00000612795 CHL1O00533 1208 aa22.38■■□□□ 1.17
CSNK1E-215ENST00000612795 HOXB7P09629 217 aa22.38■■□□□ 1.17
CSNK1E-215ENST00000612795 HSP90B1P14625 803 aaKnown RBP22.38■■□□□ 1.17
CSNK1E-215ENST00000612795 MYOZ2Q9NPC6 264 aa22.38■■□□□ 1.17
CSNK1E-215ENST00000612795 SEC31BQ9NQW1 1179 aa22.38■■□□□ 1.17
CSNK1E-215ENST00000612795 HYPKQ9NX55 129 aa22.38■■□□□ 1.17
CSNK1E-215ENST00000612795 USP17L8P0C7I0 530 aa22.37■■□□□ 1.17
CSNK1E-215ENST00000612795 ZNF296Q8WUU4 475 aaPredicted RBP22.37■■□□□ 1.17
CSNK1E-215ENST00000612795 ZNF646O15015 1829 aaPredicted RBP22.36■■□□□ 1.17
CSNK1E-215ENST00000612795 TBC1D8O95759 1140 aa22.36■■□□□ 1.17
CSNK1E-215ENST00000612795 TTLL12Q14166 644 aaPredicted RBP22.36■■□□□ 1.17
CSNK1E-215ENST00000612795 MOB2Q70IA6 237 aa22.36■■□□□ 1.17
CSNK1E-215ENST00000612795 TRIM28Q13263 835 aaKnown RBP22.35■■□□□ 1.17
CSNK1E-215ENST00000612795 CCDC152Q4G0S7 254 aa22.35■■□□□ 1.17
CSNK1E-215ENST00000612795 RIC3Q7Z5B4 369 aa22.35■■□□□ 1.17
CSNK1E-215ENST00000612795 CCDC146Q8IYE0 955 aa22.35■■□□□ 1.17
CSNK1E-215ENST00000612795 ZBTB38Q8NAP3 1195 aaPredicted RBP22.35■■□□□ 1.17
CSNK1E-215ENST00000612795 SCAF8Q9UPN6 1271 aaKnown RBP22.35■■□□□ 1.17
CSNK1E-215ENST00000612795 UBE2Q2LH0YL09 131 aa22.34■■□□□ 1.17
CSNK1E-215ENST00000612795 GOLGA2Q08379 1002 aa22.34■■□□□ 1.17
CSNK1E-215ENST00000612795 XDHP47989 1333 aa22.33■■□□□ 1.17
CSNK1E-215ENST00000612795 USP17L3A6NCW0 530 aa22.33■■□□□ 1.17
CSNK1E-215ENST00000612795 USP17L4A6NCW7 530 aa22.33■■□□□ 1.17
CSNK1E-215ENST00000612795 USP17L1Q7RTZ2 530 aa22.33■■□□□ 1.17
CSNK1E-215ENST00000612795 NF2P35240 595 aa22.32■■□□□ 1.16
CSNK1E-215ENST00000612795 CCDC85AQ96PX6 553 aaPredicted RBP22.32■■□□□ 1.16
CSNK1E-215ENST00000612795 GMLQ99445 158 aa22.32■■□□□ 1.16
CSNK1E-215ENST00000612795 GPR25O00155 361 aa22.31■■□□□ 1.16
CSNK1E-215ENST00000612795 MKRN3Q13064 507 aaKnown RBP22.31■■□□□ 1.16
CSNK1E-215ENST00000612795 PRAMEF18Q5VWM3 479 aa22.31■■□□□ 1.16
CSNK1E-215ENST00000612795 DUSP27Q5VZP5 1158 aa22.31■■□□□ 1.16
CSNK1E-215ENST00000612795 FBXO46Q6PJ61 603 aaPredicted RBP22.31■■□□□ 1.16
CSNK1E-215ENST00000612795 PODNQ7Z5L7 613 aa22.31■■□□□ 1.16
CSNK1E-215ENST00000612795 ANKRD18AQ8IVF6 992 aa22.31■■□□□ 1.16
CSNK1E-215ENST00000612795 MYD88Q99836 296 aa22.31■■□□□ 1.16
CSNK1E-215ENST00000612795 PDE8AO60658 829 aa22.3■■□□□ 1.16
CSNK1E-215ENST00000612795 ATP2B4P23634 1241 aa22.3■■□□□ 1.16
CSNK1E-215ENST00000612795 SREBF2Q12772 1141 aa22.3■■□□□ 1.16
CSNK1E-215ENST00000612795 TRIM35Q9UPQ4 493 aa22.3■■□□□ 1.16
CSNK1E-215ENST00000612795 NBPF9Q3BBW0 867 aa22.29■■□□□ 1.16
CSNK1E-215ENST00000612795 OGFOD1Q8N543 542 aa22.29■■□□□ 1.16
CSNK1E-215ENST00000612795 FBXW7Q969H0 707 aa22.29■■□□□ 1.16
CSNK1E-215ENST00000612795 PCCAP05165 728 aaPredicted RBP22.28■■□□□ 1.16
CSNK1E-215ENST00000612795 TM4SF4P48230 202 aa22.28■■□□□ 1.16
CSNK1E-215ENST00000612795 RALBP1Q15311 655 aa22.28■■□□□ 1.16
CSNK1E-215ENST00000612795 NOM1Q5C9Z4 860 aaKnown RBP22.28■■□□□ 1.16
CSNK1E-215ENST00000612795 CCDC191Q8NCU4 936 aa22.28■■□□□ 1.16
CSNK1E-215ENST00000612795 MED23Q9ULK4 1368 aa22.27■■□□□ 1.16
CSNK1E-215ENST00000612795 FKTNO75072 461 aa22.27■■□□□ 1.16
CSNK1E-215ENST00000612795 JARID2Q92833 1246 aaPredicted RBP22.27■■□□□ 1.16
CSNK1E-215ENST00000612795 RUNDC1Q96C34 613 aa22.27■■□□□ 1.16
CSNK1E-215ENST00000612795 GCC1Q96CN9 775 aa22.27■■□□□ 1.16
CSNK1E-215ENST00000612795 CWC25Q9NXE8 425 aaPredicted RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms